RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 LCN9Q8WX39 176 aa-0.26□□□□□ -2.45
LINC00648-201ENST00000553747 CGREF1Q99674 301 aa-0.26□□□□□ -2.45
LINC00648-201ENST00000553747 C2CD3Q4AC94 2353 aa-0.26□□□□□ -2.45
LINC00648-201ENST00000553747 MYO7BQ6PIF6 2116 aa-0.26□□□□□ -2.45
LINC00648-201ENST00000553747 LRRC37AA6NMS7 1700 aa-0.27□□□□□ -2.45
LINC00648-201ENST00000553747 IQSEC2Q5JU85 1478 aa-0.27□□□□□ -2.45
LINC00648-201ENST00000553747 MLH3Q9UHC1 1453 aa-0.27□□□□□ -2.45
LINC00648-201ENST00000553747 SPINK4O60575 86 aa-0.27□□□□□ -2.45
LINC00648-201ENST00000553747 SNCAP37840 140 aa-0.27□□□□□ -2.45
LINC00648-201ENST00000553747 SFTA2Q6UW10 78 aa-0.27□□□□□ -2.45
LINC00648-201ENST00000553747 FDCSPQ8NFU4 85 aa-0.27□□□□□ -2.45
LINC00648-201ENST00000553747 USMG5Q96IX5 58 aa-0.27□□□□□ -2.45
LINC00648-201ENST00000553747 LRP1BQ9NZR2 4599 aa-0.27□□□□□ -2.45
LINC00648-201ENST00000553747 FYCO1Q9BQS8 1478 aa-0.28□□□□□ -2.45
LINC00648-201ENST00000553747 COL6A3P12111 3177 aa-0.28□□□□□ -2.45
LINC00648-201ENST00000553747 hADV29S1A0JD25 119 aa-0.28□□□□□ -2.45
LINC00648-201ENST00000553747 C20orf202A1L168 122 aa-0.28□□□□□ -2.45
LINC00648-201ENST00000553747 COX8AP10176 69 aa-0.28□□□□□ -2.45
LINC00648-201ENST00000553747 FMN2Q9NZ56 1722 aa-0.28□□□□□ -2.45
LINC00648-201ENST00000553747 MARF1Q9Y4F3 1742 aaKnown RBP-0.28□□□□□ -2.45
LINC00648-201ENST00000553747 ABCC2Q92887 1545 aa-0.28□□□□□ -2.45
LINC00648-201ENST00000553747 NKTRP30414 1462 aaKnown RBP-0.29□□□□□ -2.46
LINC00648-201ENST00000553747 PKDREJQ9NTG1 2253 aa-0.29□□□□□ -2.46
LINC00648-201ENST00000553747 DOPEY2Q9Y3R5 2298 aa-0.29□□□□□ -2.46
LINC00648-201ENST00000553747 MUC12Q9UKN1 5478 aa-0.29□□□□□ -2.46
LINC00648-201ENST00000553747 A0A087WVE0 104 aa-0.29□□□□□ -2.46
LINC00648-201ENST00000553747 NDUFC1O43677 76 aa-0.29□□□□□ -2.46
LINC00648-201ENST00000553747 SEC11AP67812 179 aa-0.29□□□□□ -2.46
LINC00648-201ENST00000553747 DEFB105AQ8NG35 78 aa-0.29□□□□□ -2.46
LINC00648-201ENST00000553747 PDCD11Q14690 1871 aaKnown RBP-0.29□□□□□ -2.46
LINC00648-201ENST00000553747 CUX1P39880 1505 aa-0.29□□□□□ -2.46
LINC00648-201ENST00000553747 KNDC1Q76NI1 1749 aa-0.3□□□□□ -2.46
LINC00648-201ENST00000553747 C5P01031 1676 aa-0.3□□□□□ -2.46
LINC00648-201ENST00000553747 TRBV25-1A0A075B6N4 114 aa-0.3□□□□□ -2.46
LINC00648-201ENST00000553747 SYS1-DBNDD2H3BUS1 97 aa-0.3□□□□□ -2.46
LINC00648-201ENST00000553747 FXYD6Q9H0Q3 95 aa-0.3□□□□□ -2.46
LINC00648-201ENST00000553747 RAPGEF2Q9Y4G8 1499 aa-0.3□□□□□ -2.46
LINC00648-201ENST00000553747 DCHS2Q6V1P9 2916 aa-0.31□□□□□ -2.46
LINC00648-201ENST00000553747 ZANQ9Y493 2812 aa-0.31□□□□□ -2.46
LINC00648-201ENST00000553747 SLIT1O75093 1534 aa-0.31□□□□□ -2.46
LINC00648-201ENST00000553747 USF3Q68DE3 2245 aa-0.31□□□□□ -2.46
LINC00648-201ENST00000553747 LOC730098B7Z3J9 87 aa-0.31□□□□□ -2.46
LINC00648-201ENST00000553747 H3BQF6 201 aa-0.31□□□□□ -2.46
LINC00648-201ENST00000553747 MPC2O95563 127 aa-0.31□□□□□ -2.46
LINC00648-201ENST00000553747 CACFD1Q9UGQ2 172 aa-0.31□□□□□ -2.46
LINC00648-201ENST00000553747 MON2Q7Z3U7 1717 aa-0.31□□□□□ -2.46
LINC00648-201ENST00000553747 PKHD1P08F94 4074 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 STAB1Q9NY15 2570 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 KMT2CQ8NEZ4 4911 aaKnown RBP-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 CLTCQ00610 1675 aaKnown RBP-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 A0A1B0GU69 56 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 H0Y9P7 68 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 H7BZZ5 65 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 S100PP25815 95 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 C6orf201Q7Z4U5 140 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 TCEAL7Q9BRU2 100 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 VAMP8Q9BV40 100 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 ANKRD36BQ8N2N9 1353 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 PDZD2O15018 2839 aa-0.32□□□□□ -2.46
LINC00648-201ENST00000553747 EPRSP07814 1512 aaKnown RBP-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 TEX14Q8IWB6 1497 aa-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 PLCE1Q9P212 2302 aa-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 A0A0G2JND7 137 aa-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 C7orf77A4D0Y5 90 aa-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 M0R2T5 61 aa-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 PMCHL1Q16048 86 aa-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 PSMG4Q5JS54 123 aa-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 C14orf144Q96I85 54 aa-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 CNTLNQ9NXG0 1405 aa-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 SAMD9Q5K651 1589 aa-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 FLGP20930 4061 aaPredicted RBP-0.33□□□□□ -2.46
LINC00648-201ENST00000553747 FANCAO15360 1455 aa-0.34□□□□□ -2.46
LINC00648-201ENST00000553747 TRAV30A0A087WSZ9 112 aa-0.34□□□□□ -2.46
LINC00648-201ENST00000553747 TMEM218A2RU14 115 aa-0.34□□□□□ -2.46
LINC00648-201ENST00000553747 ATOX1O00244 68 aa-0.34□□□□□ -2.46
LINC00648-201ENST00000553747 GNGT2O14610 69 aa-0.34□□□□□ -2.46
LINC00648-201ENST00000553747 UQCRHP07919 91 aa-0.34□□□□□ -2.46
LINC00648-201ENST00000553747 FLNAP21333 2647 aaKnown RBP-0.34□□□□□ -2.46
LINC00648-201ENST00000553747 KLK9Q2XQG4 91 aa-0.34□□□□□ -2.46
LINC00648-201ENST00000553747 ANKRD26Q9UPS8 1709 aa-0.34□□□□□ -2.46
LINC00648-201ENST00000553747 ALKQ9UM73 1620 aa-0.35□□□□□ -2.46
LINC00648-201ENST00000553747 NRXN1Q9ULB1 1477 aa-0.35□□□□□ -2.46
LINC00648-201ENST00000553747 TENM2Q9NT68 2774 aa-0.35□□□□□ -2.47
LINC00648-201ENST00000553747 ASIPP42127 132 aa-0.35□□□□□ -2.47
LINC00648-201ENST00000553747 PMCHL2Q9BQD1 86 aa-0.35□□□□□ -2.47
LINC00648-201ENST00000553747 CRYBG1Q9Y4K1 1723 aa-0.35□□□□□ -2.47
LINC00648-201ENST00000553747 MT-ATP8P03928 68 aa-0.36□□□□□ -2.47
LINC00648-201ENST00000553747 DEFB107AQ8IZN7 70 aa-0.36□□□□□ -2.47
LINC00648-201ENST00000553747 TRGV9Q99603 122 aa-0.36□□□□□ -2.47
LINC00648-201ENST00000553747 AP4S1Q9Y587 144 aa-0.36□□□□□ -2.47
LINC00648-201ENST00000553747 DOPEY1Q5JWR5 2465 aa-0.36□□□□□ -2.47
LINC00648-201ENST00000553747 QSER1Q2KHR3 1735 aa-0.36□□□□□ -2.47
LINC00648-201ENST00000553747 EP300Q09472 2414 aaPredicted RBP-0.36□□□□□ -2.47
LINC00648-201ENST00000553747 MAP1AP78559 2803 aaPredicted RBP-0.37□□□□□ -2.47
LINC00648-201ENST00000553747 PCLOQ9Y6V0 5065 aa-0.37□□□□□ -2.47
LINC00648-201ENST00000553747 MYO3AQ8NEV4 1616 aa-0.37□□□□□ -2.47
LINC00648-201ENST00000553747 CPSF4LA6NMK7 179 aaKnown RBP-0.37□□□□□ -2.47
LINC00648-201ENST00000553747 SERP2Q8N6R1 65 aa-0.37□□□□□ -2.47
LINC00648-201ENST00000553747 CRIPTQ9P021 101 aa-0.37□□□□□ -2.47
LINC00648-201ENST00000553747 COL14A1Q05707 1796 aaKnown RBP-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms