RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 Q8N976 141 aa3.4□□□□□ -1.87
VTI1B-202ENST00000553619 TM2D2Q9BX73 214 aa3.4□□□□□ -1.87
VTI1B-202ENST00000553619 KLK12Q9UKR0 248 aa3.4□□□□□ -1.87
VTI1B-202ENST00000553619 A0A0J9YXV3 536 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 IBA57-AS1B1ANH7 110 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 APOMO95445 188 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 BATFQ16520 125 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 RNASE13Q5GAN3 156 aaKnown RBP3.39□□□□□ -1.87
VTI1B-202ENST00000553619 LINC00242Q5T6M2 205 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 ZC2HC1BQ5TFG8 222 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 ZFAND6Q6FIF0 208 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 CD164L2Q6UWJ8 174 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 WFDC10BQ8IUB3 73 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 UBE2WQ96B02 151 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 PLEKHB2Q96CS7 222 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 PMCHL2Q9BQD1 86 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 CHAC1Q9BUX1 264 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 SPANXDQ9BXN6 97 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 PRR34Q9NV39 138 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 PKD1L1Q8TDX9 2849 aa3.39□□□□□ -1.87
VTI1B-202ENST00000553619 NBEAL2Q6ZNJ1 2754 aa3.38□□□□□ -1.87
VTI1B-202ENST00000553619 IGLV4-69A0A075B6H9 119 aa3.38□□□□□ -1.87
VTI1B-202ENST00000553619 IGLV5-45A0A087WSX0 123 aa3.38□□□□□ -1.87
VTI1B-202ENST00000553619 A6NDN8 102 aa3.38□□□□□ -1.87
VTI1B-202ENST00000553619 ZNF22P17026 224 aaPredicted RBP3.38□□□□□ -1.87
VTI1B-202ENST00000553619 SPATA45Q537H7 98 aa3.38□□□□□ -1.87
VTI1B-202ENST00000553619 ENHOQ6UWT2 76 aa3.38□□□□□ -1.87
VTI1B-202ENST00000553619 ATOH7Q8N100 152 aa3.38□□□□□ -1.87
VTI1B-202ENST00000553619 CHCHD10Q8WYQ3 142 aaPredicted RBP3.38□□□□□ -1.87
VTI1B-202ENST00000553619 FAM104AQ969W3 186 aa3.38□□□□□ -1.87
VTI1B-202ENST00000553619 TMEM126AQ9H061 195 aa3.38□□□□□ -1.87
VTI1B-202ENST00000553619 A0A087WZ39 114 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 IGHV1-58A0A0C4DH39 117 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 hDV102S1A0JD36 115 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 TMEM223A0PJW6 202 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 E9PLD3 99 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 COX7A2LO14548 114 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 LEPROTO15243 131 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 PRSS2P07478 247 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 LGALS3P17931 250 aaKnown RBP3.37□□□□□ -1.87
VTI1B-202ENST00000553619 NMUP48645 174 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 COX6A2Q02221 97 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 CASC10Q5T4H9 136 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 SFTA2Q6UW10 78 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 STPG4Q8N801 248 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 CDKN2A-AS1Q9UH64 79 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 PAM16Q9Y3D7 125 aa3.37□□□□□ -1.87
VTI1B-202ENST00000553619 IGLV10-54A0A075B6I4 117 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 IGKV2D-24A0A075B6R9 120 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 IGHV3OR16-9A0A0B4J2B5 98 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 GAGE10A6NGK3 116 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 XCL1P47992 114 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 HSD52Q0P140 79 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 C6orf226Q5I0X4 101 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 SLC25A34Q6PIV7 304 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 CLPSL2Q6UWE3 100 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 C5orf38Q86SI9 138 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 BOD1L2Q8IYS8 172 aa3.36□□□□□ -1.87
VTI1B-202ENST00000553619 NBDYA0A0U1RRE5 68 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 MYMXA0A1B0GTQ4 84 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 J3QQQ9 107 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 PSCAO43653 123 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 LY6G6CO95867 125 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 SPINK8P0C7L1 97 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 COX8AP10176 69 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 CXCL5P42830 114 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 CIRBPQ14011 172 aaKnown RBP3.35□□□□□ -1.87
VTI1B-202ENST00000553619 C14orf177Q52M58 125 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 Q8IZM0 81 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 COX7B2Q8TF08 81 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 Q9HAA7 133 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 TOMM7Q9P0U1 55 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 ERG28Q9UKR5 140 aa3.35□□□□□ -1.87
VTI1B-202ENST00000553619 IGHV3-64A0A075B6Q5 118 aa3.34□□□□□ -1.87
VTI1B-202ENST00000553619 SMIM1B2RUZ4 78 aa3.34□□□□□ -1.87
VTI1B-202ENST00000553619 PRYO14603 147 aa3.34□□□□□ -1.87
VTI1B-202ENST00000553619 SCGB1D4Q6XE38 83 aa3.34□□□□□ -1.87
VTI1B-202ENST00000553619 OR13C6PQ8NH95 151 aa3.34□□□□□ -1.87
VTI1B-202ENST00000553619 COPS9Q8WXC6 57 aa3.34□□□□□ -1.87
VTI1B-202ENST00000553619 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.87
VTI1B-202ENST00000553619 TENM3Q9P273 2699 aa3.33□□□□□ -1.88
VTI1B-202ENST00000553619 ZNF815PA8K554 130 aa3.33□□□□□ -1.88
VTI1B-202ENST00000553619 Q6ZVH6 145 aa3.33□□□□□ -1.88
VTI1B-202ENST00000553619 C2orf48Q96LS8 159 aa3.33□□□□□ -1.88
VTI1B-202ENST00000553619 SPANXB1Q9NS25 103 aaPredicted RBP3.33□□□□□ -1.88
VTI1B-202ENST00000553619 HIGD1BQ9P298 99 aa3.33□□□□□ -1.88
VTI1B-202ENST00000553619 IGKV2D-26A0A0A0MRZ7 120 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 NDUFA1O15239 70 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 TIMM17BO60830 172 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 SPAG11BQ08648 103 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 SRSF9Q13242 221 aaKnown RBP eCLIP3.32□□□□□ -1.88
VTI1B-202ENST00000553619 COX17Q14061 63 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 TAL2Q16559 108 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 MEIG1Q5JSS6 88 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 C1orf134Q5TEV5 83 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 KRTAP26-1Q6PEX3 210 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 PCP2Q8IVA1 136 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 C6orf223Q8N319 242 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 SMIM20Q8N5G0 67 aa3.32□□□□□ -1.88
VTI1B-202ENST00000553619 ANAPC13Q9BS18 74 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms