RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 A0A087WZ39 114 aa7.32□□□□□ -1.24
SRP54-203ENST00000553544 LOC107984640A0A0U1RRK4 108 aa7.32□□□□□ -1.24
SRP54-203ENST00000553544 PTTG1IPP53801 180 aa7.32□□□□□ -1.24
SRP54-203ENST00000553544 SRSF9Q13242 221 aaKnown RBP eCLIP7.32□□□□□ -1.24
SRP54-203ENST00000553544 RNF151Q2KHN1 245 aa7.32□□□□□ -1.24
SRP54-203ENST00000553544 LINC00242Q5T6M2 205 aa7.32□□□□□ -1.24
SRP54-203ENST00000553544 ORAOV1Q8WV07 137 aa7.32□□□□□ -1.24
SRP54-203ENST00000553544 NDUFA1O15239 70 aa7.31□□□□□ -1.24
SRP54-203ENST00000553544 HSBP1O75506 76 aa7.31□□□□□ -1.24
SRP54-203ENST00000553544 PRSS2P07478 247 aa7.31□□□□□ -1.24
SRP54-203ENST00000553544 PMVKQ15126 192 aa7.31□□□□□ -1.24
SRP54-203ENST00000553544 BAGE3Q86Y29 109 aa7.31□□□□□ -1.24
SRP54-203ENST00000553544 Q6ZRP5 223 aa7.3□□□□□ -1.24
SRP54-203ENST00000553544 LINC00173Q6ZV60 143 aa7.3□□□□□ -1.24
SRP54-203ENST00000553544 MRPL35Q9NZE8 188 aaKnown RBP7.3□□□□□ -1.24
SRP54-203ENST00000553544 TINCRA0A1B0GVN0 87 aa7.29□□□□□ -1.24
SRP54-203ENST00000553544 H3BRM9 83 aa7.29□□□□□ -1.24
SRP54-203ENST00000553544 TRGC2P03986 189 aa7.29□□□□□ -1.24
SRP54-203ENST00000553544 CXCL5P42830 114 aa7.29□□□□□ -1.24
SRP54-203ENST00000553544 GAGE2BQ13066 116 aa7.29□□□□□ -1.24
SRP54-203ENST00000553544 KIAA0087Q14695 138 aa7.29□□□□□ -1.24
SRP54-203ENST00000553544 A0A1W2PNN7 141 aa7.28□□□□□ -1.24
SRP54-203ENST00000553544 C10orf25Q5T742 122 aa7.28□□□□□ -1.24
SRP54-203ENST00000553544 LINC00469Q8N7U9 141 aa7.28□□□□□ -1.24
SRP54-203ENST00000553544 KRTAP9-2Q9BYQ4 174 aa7.28□□□□□ -1.24
SRP54-203ENST00000553544 CST9LQ9H4G1 147 aa7.28□□□□□ -1.24
SRP54-203ENST00000553544 TLX1NBP0CAT3 122 aa7.27□□□□□ -1.25
SRP54-203ENST00000553544 NDUFA6P56556 154 aa7.27□□□□□ -1.25
SRP54-203ENST00000553544 ZC2HC1BQ5TFG8 222 aa7.27□□□□□ -1.25
SRP54-203ENST00000553544 TRBV30A0A0K0K1B3 111 aa7.26□□□□□ -1.25
SRP54-203ENST00000553544 COLCA2A8K830 154 aa7.26□□□□□ -1.25
SRP54-203ENST00000553544 S100A1P23297 94 aa7.26□□□□□ -1.25
SRP54-203ENST00000553544 CKS1BP61024 79 aa7.26□□□□□ -1.25
SRP54-203ENST00000553544 C9orf116Q5BN46 136 aaPredicted RBP7.26□□□□□ -1.25
SRP54-203ENST00000553544 UNQ6190/PRO20217Q6UXQ8 127 aa7.26□□□□□ -1.25
SRP54-203ENST00000553544 Q8IZM0 81 aa7.26□□□□□ -1.25
SRP54-203ENST00000553544 C6orf48Q9UBA6 75 aa7.26□□□□□ -1.25
SRP54-203ENST00000553544 LPAP08519 4548 aa7.26□□□□□ -1.25
SRP54-203ENST00000553544 IGLV5-45A0A087WSX0 123 aa7.25□□□□□ -1.25
SRP54-203ENST00000553544 RPL18AQ02543 176 aaKnown RBP7.25□□□□□ -1.25
SRP54-203ENST00000553544 PDZD11Q5EBL8 140 aa7.25□□□□□ -1.25
SRP54-203ENST00000553544 C6orf226Q5I0X4 101 aa7.25□□□□□ -1.25
SRP54-203ENST00000553544 URB1-AS1Q96HZ7 61 aa7.25□□□□□ -1.25
SRP54-203ENST00000553544 A0A096LNJ9 63 aa7.24□□□□□ -1.25
SRP54-203ENST00000553544 IGLC3P0DOY3 106 aa7.24□□□□□ -1.25
SRP54-203ENST00000553544 PMCHL1Q16048 86 aa7.24□□□□□ -1.25
SRP54-203ENST00000553544 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
SRP54-203ENST00000553544 IFI27L1Q96BM0 104 aa7.24□□□□□ -1.25
SRP54-203ENST00000553544 TOMM7Q9P0U1 55 aa7.24□□□□□ -1.25
SRP54-203ENST00000553544 CDKN2A-AS1Q9UH64 79 aa7.24□□□□□ -1.25
SRP54-203ENST00000553544 HSPB8Q9UJY1 196 aa7.24□□□□□ -1.25
SRP54-203ENST00000553544 TRAV12-1A0A0B4J245 112 aa7.23□□□□□ -1.25
SRP54-203ENST00000553544 A0A0U1RQV1 116 aa7.23□□□□□ -1.25
SRP54-203ENST00000553544 LEPROTL1O95214 131 aa7.23□□□□□ -1.25
SRP54-203ENST00000553544 C2orf82Q6UX34 121 aa7.22□□□□□ -1.25
SRP54-203ENST00000553544 PSORS1C2Q9UIG4 136 aa7.22□□□□□ -1.25
SRP54-203ENST00000553544 MUC2Q02817 5179 aa7.21□□□□□ -1.26
SRP54-203ENST00000553544 SMIM1B2RUZ4 78 aa7.21□□□□□ -1.26
SRP54-203ENST00000553544 F8VRH5 84 aa7.21□□□□□ -1.26
SRP54-203ENST00000553544 SERF1AO75920 110 aa7.21□□□□□ -1.26
SRP54-203ENST00000553544 LCE2CQ5TA81 110 aa7.21□□□□□ -1.26
SRP54-203ENST00000553544 PHF5AQ7RTV0 110 aaKnown RBP7.21□□□□□ -1.26
SRP54-203ENST00000553544 COX7B2Q8TF08 81 aa7.21□□□□□ -1.26
SRP54-203ENST00000553544 CHTOPQ9Y3Y2 248 aaKnown RBP7.21□□□□□ -1.26
SRP54-203ENST00000553544 FAM168BA1KXE4 195 aa7.2□□□□□ -1.26
SRP54-203ENST00000553544 NDUFC2-KCTD14E9PQ53 114 aa7.2□□□□□ -1.26
SRP54-203ENST00000553544 KRTAP7-1Q8IUC3 87 aa7.2□□□□□ -1.26
SRP54-203ENST00000553544 SCO1O75880 301 aa7.19□□□□□ -1.26
SRP54-203ENST00000553544 GAGE2EQ4V326 116 aa7.19□□□□□ -1.26
SRP54-203ENST00000553544 TMEM170BQ5T4T1 132 aa7.19□□□□□ -1.26
SRP54-203ENST00000553544 GAGE2DQ9UEU5 116 aa7.19□□□□□ -1.26
SRP54-203ENST00000553544 SPINK8P0C7L1 97 aa7.18□□□□□ -1.26
SRP54-203ENST00000553544 ZNF22P17026 224 aaPredicted RBP7.18□□□□□ -1.26
SRP54-203ENST00000553544 KRTAP11-1Q8IUC1 163 aa7.18□□□□□ -1.26
SRP54-203ENST00000553544 FAM19A2Q8N3H0 131 aa7.18□□□□□ -1.26
SRP54-203ENST00000553544 MAP1LC3CQ9BXW4 147 aa7.18□□□□□ -1.26
SRP54-203ENST00000553544 C11orf86A6NJI1 115 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST1H2BKO60814 126 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST1H2BJP06899 126 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST1H2BOP23527 126 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 PLNP26678 52 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST1H2BBP33778 126 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST1H2BDP58876 126 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST1H2BCP62807 126 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST2H2BEQ16778 126 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.17□□□□□ -1.26
SRP54-203ENST00000553544 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST1H2BHQ93079 126 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST1H2BNQ99877 126 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 HIST1H2BMQ99879 126 aa7.17□□□□□ -1.26
SRP54-203ENST00000553544 IGLV5-39A0A0G2JS06 123 aa7.16□□□□□ -1.26
SRP54-203ENST00000553544 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
SRP54-203ENST00000553544 ATP6V1G1O75348 118 aa7.16□□□□□ -1.26
SRP54-203ENST00000553544 HERVK_113P61574 105 aa7.16□□□□□ -1.26
SRP54-203ENST00000553544 C1orf137Q5JT78 98 aa7.16□□□□□ -1.26
SRP54-203ENST00000553544 FAM19A5Q7Z5A7 132 aaPredicted RBP7.16□□□□□ -1.26
SRP54-203ENST00000553544 PRR26Q8N8Z3 221 aa7.16□□□□□ -1.26
SRP54-203ENST00000553544 H0Y8G0 127 aa7.15□□□□□ -1.26
SRP54-203ENST00000553544 PRR4Q16378 134 aa7.15□□□□□ -1.26
SRP54-203ENST00000553544 DIRC1Q969H9 104 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms