RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TENM1Q9UKZ4 2725 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 SETD2Q9BYW2 2564 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-221ENST00000553498 CYSRT1A8MQ03 144 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 F8W1H4 67 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 COX7A2LO14548 114 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 APOMO95445 188 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 ANGP03950 147 aaKnown RBP5.01□□□□□ -1.61
ATXN3-221ENST00000553498 SLPIP03973 132 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 HTN3P15516 51 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 REG3AQ06141 175 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 MEIG1Q5JSS6 88 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 LINC00269Q8N2A0 174 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 C15orf53Q8NAA6 179 aa5.01□□□□□ -1.61
ATXN3-221ENST00000553498 TEP1Q99973 2627 aaKnown RBP5□□□□□ -1.61
ATXN3-221ENST00000553498 VWFP04275 2813 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 DEFB131BA0A096LNP1 70 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 TRAV10A0A0B4J240 114 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 A0A0J9YWU9 116 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 TSPAN13O95857 204 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 IGHV3-33P01772 117 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 COX17Q14061 63 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 C6orf226Q5I0X4 101 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 ADAMTSL4-AS1Q5T5F5 129 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 Q6ZTC4 211 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 LINC00308Q8TCZ7 52 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 CHCHD10Q8WYQ3 142 aaPredicted RBP5□□□□□ -1.61
ATXN3-221ENST00000553498 C1orf43Q9BWL3 253 aa5□□□□□ -1.61
ATXN3-221ENST00000553498 FLNBO75369 2602 aaKnown RBP5□□□□□ -1.61
ATXN3-221ENST00000553498 FBN1P35555 2871 aaKnown RBP5□□□□□ -1.61
ATXN3-221ENST00000553498 F8P00451 2351 aa4.99□□□□□ -1.61
ATXN3-221ENST00000553498 SORL1Q92673 2214 aa4.99□□□□□ -1.61
ATXN3-221ENST00000553498 IGKV3OR2-268A0A0C4DH90 116 aa4.99□□□□□ -1.61
ATXN3-221ENST00000553498 TRBV30A0A0K0K1B3 111 aa4.99□□□□□ -1.61
ATXN3-221ENST00000553498 CRPP02741 224 aa4.99□□□□□ -1.61
ATXN3-221ENST00000553498 COX6CP09669 75 aa4.99□□□□□ -1.61
ATXN3-221ENST00000553498 XCL1P47992 114 aa4.99□□□□□ -1.61
ATXN3-221ENST00000553498 RETNQ9HD89 108 aa4.99□□□□□ -1.61
ATXN3-221ENST00000553498 KLK5Q9Y337 293 aaPredicted RBP4.99□□□□□ -1.61
ATXN3-221ENST00000553498 F8WDY8 70 aa4.98□□□□□ -1.61
ATXN3-221ENST00000553498 K7EIL1 84 aa4.98□□□□□ -1.61
ATXN3-221ENST00000553498 CKS1BP61024 79 aa4.98□□□□□ -1.61
ATXN3-221ENST00000553498 CFAP161Q6P656 301 aa4.98□□□□□ -1.61
ATXN3-221ENST00000553498 C5orf38Q86SI9 138 aa4.98□□□□□ -1.61
ATXN3-221ENST00000553498 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
ATXN3-221ENST00000553498 TOMM7Q9P0U1 55 aa4.98□□□□□ -1.61
ATXN3-221ENST00000553498 ANK2Q01484 3957 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 ATRQ13535 2644 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 NACAE9PAV3 2078 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 TRAV13-2A0A0B4J235 113 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 LOC107984156A0A0G2JMH3 177 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 B5MCH6 92 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 M0QXV9 152 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 SCGB1C2P0DMR2 95 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 PSMB2P49721 201 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 FOXI1Q12951 378 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 LINC01556Q5JQF7 62 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 ARL17AQ8IVW1 177 aa4.97□□□□□ -1.61
ATXN3-221ENST00000553498 NAA38Q9BRA0 125 aaKnown RBP4.97□□□□□ -1.61
ATXN3-221ENST00000553498 K7ERU9 68 aa4.96□□□□□ -1.62
ATXN3-221ENST00000553498 NANOS2P60321 138 aaKnown RBP4.96□□□□□ -1.62
ATXN3-221ENST00000553498 ATXN8Q156A1 80 aa4.96□□□□□ -1.62
ATXN3-221ENST00000553498 Q1RN00 199 aa4.96□□□□□ -1.62
ATXN3-221ENST00000553498 DEFB121Q5J5C9 76 aa4.96□□□□□ -1.62
ATXN3-221ENST00000553498 FAM30AQ9NZY2 134 aa4.96□□□□□ -1.62
ATXN3-221ENST00000553498 GVQW2A0A096LPI5 108 aaPredicted RBP4.95□□□□□ -1.62
ATXN3-221ENST00000553498 GAGE12HA6NDE8 117 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 H3BMG7 143 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 J3QR89 54 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 LINC00158P58513 81 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 KIAA0087Q14695 138 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 ENHOQ6UWT2 76 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 MIR7-3HGQ8N6C7 128 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 LINC01600Q96MT4 127 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 KLK12Q9UKR0 248 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 TRRAPQ9Y4A5 3859 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 DNAH3Q8TD57 4116 aa4.95□□□□□ -1.62
ATXN3-221ENST00000553498 JMJD1CQ15652 2540 aa4.94□□□□□ -1.62
ATXN3-221ENST00000553498 NDUFC2O95298 119 aa4.94□□□□□ -1.62
ATXN3-221ENST00000553498 NHLRC4P0CG21 123 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-221ENST00000553498 DNAH10OSP0CZ25 163 aa4.94□□□□□ -1.62
ATXN3-221ENST00000553498 ESRGQ1W209 222 aa4.94□□□□□ -1.62
ATXN3-221ENST00000553498 OCIAD2Q56VL3 154 aa4.94□□□□□ -1.62
ATXN3-221ENST00000553498 CLPSL2Q6UWE3 100 aa4.94□□□□□ -1.62
ATXN3-221ENST00000553498 UBE2WQ96B02 151 aa4.94□□□□□ -1.62
ATXN3-221ENST00000553498 RPL13AP40429 203 aaKnown RBP4.93□□□□□ -1.62
ATXN3-221ENST00000553498 CCL18P55774 89 aa4.93□□□□□ -1.62
ATXN3-221ENST00000553498 SPAG11BQ08648 103 aa4.93□□□□□ -1.62
ATXN3-221ENST00000553498 SOSTDC1Q6X4U4 206 aa4.93□□□□□ -1.62
ATXN3-221ENST00000553498 WFDC10BQ8IUB3 73 aa4.93□□□□□ -1.62
ATXN3-221ENST00000553498 DAND5Q8N907 189 aa4.93□□□□□ -1.62
ATXN3-221ENST00000553498 B9D2Q9BPU9 175 aa4.93□□□□□ -1.62
ATXN3-221ENST00000553498 UPK3BQ9BT76 320 aa4.93□□□□□ -1.62
ATXN3-221ENST00000553498 SND1-IT1Q9HBX3 110 aa4.93□□□□□ -1.62
ATXN3-221ENST00000553498 PRO0461Q9UI25 63 aa4.93□□□□□ -1.62
ATXN3-221ENST00000553498 IGLV10-54A0A075B6I4 117 aa4.92□□□□□ -1.62
ATXN3-221ENST00000553498 TRIAP1O43715 76 aa4.92□□□□□ -1.62
ATXN3-221ENST00000553498 TCL1BO95988 128 aa4.92□□□□□ -1.62
ATXN3-221ENST00000553498 RPL28P46779 137 aaKnown RBP4.92□□□□□ -1.62
ATXN3-221ENST00000553498 NPC2P61916 151 aa4.92□□□□□ -1.62
ATXN3-221ENST00000553498 RMI2Q96E14 147 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms