RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 ARHGAP32A7KAX9 2087 aa8.22□□□□□ -1.09
SYNE2-208ENST00000553289 C9orf116Q5BN46 136 aaPredicted RBP8.21□□□□□ -1.1
SYNE2-208ENST00000553289 PRYO14603 147 aa8.21□□□□□ -1.1
SYNE2-208ENST00000553289 FAM30AQ9NZY2 134 aa8.21□□□□□ -1.1
SYNE2-208ENST00000553289 SERP1Q9Y6X1 66 aa8.21□□□□□ -1.1
SYNE2-208ENST00000553289 HRCT1Q6UXD1 115 aa8.2□□□□□ -1.1
SYNE2-208ENST00000553289 KIF25-AS1Q9Y6Z4 181 aa8.2□□□□□ -1.1
SYNE2-208ENST00000553289 CCDC168Q8NDH2 2452 aa8.2□□□□□ -1.1
SYNE2-208ENST00000553289 C6orf223Q8N319 242 aa8.2□□□□□ -1.1
SYNE2-208ENST00000553289 RAI1Q7Z5J4 1906 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-208ENST00000553289 MYO18BQ8IUG5 2567 aa8.19□□□□□ -1.1
SYNE2-208ENST00000553289 Q6ZSN1 163 aa8.19□□□□□ -1.1
SYNE2-208ENST00000553289 A6NED7 52 aa8.19□□□□□ -1.1
SYNE2-208ENST00000553289 LY6G6CO95867 125 aa8.19□□□□□ -1.1
SYNE2-208ENST00000553289 Q6ZTC4 211 aa8.18□□□□□ -1.1
SYNE2-208ENST00000553289 UTRNP46939 3433 aa8.18□□□□□ -1.1
SYNE2-208ENST00000553289 PIEZO1Q92508 2521 aa8.18□□□□□ -1.1
SYNE2-208ENST00000553289 Q8N2B8 174 aa8.17□□□□□ -1.1
SYNE2-208ENST00000553289 WDR87Q6ZQQ6 2873 aa8.17□□□□□ -1.1
SYNE2-208ENST00000553289 LYPD5Q6UWN5 251 aa8.16□□□□□ -1.1
SYNE2-208ENST00000553289 LINC00575Q6W349 94 aa8.16□□□□□ -1.1
SYNE2-208ENST00000553289 RETNQ9HD89 108 aa8.16□□□□□ -1.1
SYNE2-208ENST00000553289 PRRC2AP48634 2157 aaKnown RBP8.16□□□□□ -1.1
SYNE2-208ENST00000553289 PRR3P79522 188 aaKnown RBP8.16□□□□□ -1.1
SYNE2-208ENST00000553289 SMR3AQ99954 134 aa8.16□□□□□ -1.1
SYNE2-208ENST00000553289 IGLV5-39A0A0G2JS06 123 aa8.16□□□□□ -1.1
SYNE2-208ENST00000553289 CELA1Q9UNI1 258 aa8.16□□□□□ -1.1
SYNE2-208ENST00000553289 A0A0U1RQV1 116 aa8.15□□□□□ -1.1
SYNE2-208ENST00000553289 PRR4Q16378 134 aa8.15□□□□□ -1.1
SYNE2-208ENST00000553289 NCOR2Q9Y618 2525 aa8.15□□□□□ -1.11
SYNE2-208ENST00000553289 Q8N3U1 123 aa8.15□□□□□ -1.11
SYNE2-208ENST00000553289 EXPH5Q8NEV8 1989 aa8.15□□□□□ -1.11
SYNE2-208ENST00000553289 IGF2RP11717 2491 aa8.14□□□□□ -1.11
SYNE2-208ENST00000553289 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
SYNE2-208ENST00000553289 LINC00208Q96KT6 92 aa8.14□□□□□ -1.11
SYNE2-208ENST00000553289 CENPFP49454 3210 aa8.14□□□□□ -1.11
SYNE2-208ENST00000553289 A0A087WVE0 104 aa8.14□□□□□ -1.11
SYNE2-208ENST00000553289 FAM19A4Q96LR4 140 aa8.14□□□□□ -1.11
SYNE2-208ENST00000553289 ESRGQ1W209 222 aa8.14□□□□□ -1.11
SYNE2-208ENST00000553289 ADAMTS20P59510 1910 aa8.13□□□□□ -1.11
SYNE2-208ENST00000553289 Q9BRP9 147 aa8.13□□□□□ -1.11
SYNE2-208ENST00000553289 MYO9AB2RTY4 2548 aa8.12□□□□□ -1.11
SYNE2-208ENST00000553289 Q6ZVQ6 151 aa8.11□□□□□ -1.11
SYNE2-208ENST00000553289 LINC00337Q8N6G1 96 aa8.11□□□□□ -1.11
SYNE2-208ENST00000553289 IGLV5-52A0A0A0MRZ9 124 aa8.11□□□□□ -1.11
SYNE2-208ENST00000553289 PIEZO2Q9H5I5 2752 aa8.1□□□□□ -1.11
SYNE2-208ENST00000553289 LINC00315P59091 139 aa8.1□□□□□ -1.11
SYNE2-208ENST00000553289 CXCL6P80162 114 aa8.1□□□□□ -1.11
SYNE2-208ENST00000553289 TRBV7-7A0A0K0K1E9 115 aa8.1□□□□□ -1.11
SYNE2-208ENST00000553289 LINC01547P58512 204 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-208ENST00000553289 ABCA2Q9BZC7 2435 aa8.1□□□□□ -1.11
SYNE2-208ENST00000553289 TLN1Q9Y490 2541 aaKnown RBP8.09□□□□□ -1.11
SYNE2-208ENST00000553289 Q6ZRU5 148 aa8.09□□□□□ -1.11
SYNE2-208ENST00000553289 IGHV3OR16-9A0A0B4J2B5 98 aa8.09□□□□□ -1.11
SYNE2-208ENST00000553289 LINC00846Q9NV44 126 aa8.09□□□□□ -1.11
SYNE2-208ENST00000553289 IGLV5-45A0A087WSX0 123 aa8.08□□□□□ -1.12
SYNE2-208ENST00000553289 A0A087WSZ3 146 aa8.08□□□□□ -1.12
SYNE2-208ENST00000553289 CIRBP-AS1Q8TBR5 109 aa8.08□□□□□ -1.12
SYNE2-208ENST00000553289 IGHV6-1A0A0B4J1U7 121 aa8.08□□□□□ -1.12
SYNE2-208ENST00000553289 DNAH12Q6ZR08 3092 aa8.07□□□□□ -1.12
SYNE2-208ENST00000553289 LINC01556Q5JQF7 62 aa8.07□□□□□ -1.12
SYNE2-208ENST00000553289 C1orf195Q5TG92 126 aa8.06□□□□□ -1.12
SYNE2-208ENST00000553289 TMEM254Q8TBM7 123 aa8.06□□□□□ -1.12
SYNE2-208ENST00000553289 HCG22E2RYF7 251 aa8.06□□□□□ -1.12
SYNE2-208ENST00000553289 NHLRC4P0CG21 123 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-208ENST00000553289 TRBV7-6A0A0J9YX20 115 aa8.06□□□□□ -1.12
SYNE2-208ENST00000553289 A0A1B0GW54 56 aa8.06□□□□□ -1.12
SYNE2-208ENST00000553289 hDV103S1A0JD37 113 aa8.05□□□□□ -1.12
SYNE2-208ENST00000553289 H0Y9P7 68 aa8.05□□□□□ -1.12
SYNE2-208ENST00000553289 H3BNG1 76 aa8.05□□□□□ -1.12
SYNE2-208ENST00000553289 BCE1O60756 84 aa8.05□□□□□ -1.12
SYNE2-208ENST00000553289 C1orf134Q5TEV5 83 aa8.05□□□□□ -1.12
SYNE2-208ENST00000553289 FHL3Q13643 280 aa8.04□□□□□ -1.12
SYNE2-208ENST00000553289 CDIP1Q9H305 208 aa8.04□□□□□ -1.12
SYNE2-208ENST00000553289 AGRNO00468 2067 aa8.04□□□□□ -1.12
SYNE2-208ENST00000553289 C22orf24Q9Y442 160 aa8.04□□□□□ -1.12
SYNE2-208ENST00000553289 LIMD2Q9BT23 127 aa8.03□□□□□ -1.12
SYNE2-208ENST00000553289 KLK9Q2XQG4 91 aa8.02□□□□□ -1.13
SYNE2-208ENST00000553289 CEP350Q5VT06 3117 aa8.02□□□□□ -1.13
SYNE2-208ENST00000553289 SOSTDC1Q6X4U4 206 aa8.02□□□□□ -1.13
SYNE2-208ENST00000553289 SMCR5Q8TEV8 140 aa8.01□□□□□ -1.13
SYNE2-208ENST00000553289 A8MTW9 85 aa8.01□□□□□ -1.13
SYNE2-208ENST00000553289 PRLHP81277 87 aa7.99□□□□□ -1.13
SYNE2-208ENST00000553289 SPATA3Q8NHX4 192 aa7.99□□□□□ -1.13
SYNE2-208ENST00000553289 PCOTHQ58A44 107 aa7.99□□□□□ -1.13
SYNE2-208ENST00000553289 TET2Q6N021 2002 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-208ENST00000553289 KIAA0087Q14695 138 aa7.98□□□□□ -1.13
SYNE2-208ENST00000553289 CEP295Q9C0D2 2601 aa7.98□□□□□ -1.13
SYNE2-208ENST00000553289 PMAIP1Q13794 54 aa7.97□□□□□ -1.13
SYNE2-208ENST00000553289 C6orf48Q9UBA6 75 aa7.97□□□□□ -1.13
SYNE2-208ENST00000553289 PRO0461Q9UI25 63 aa7.97□□□□□ -1.13
SYNE2-208ENST00000553289 SMCPP49901 116 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-208ENST00000553289 COL4A2P08572 1712 aa7.96□□□□□ -1.13
SYNE2-208ENST00000553289 ELOF1P60002 83 aaKnown RBP7.96□□□□□ -1.13
SYNE2-208ENST00000553289 SBSPONQ8IVN8 264 aa7.96□□□□□ -1.13
SYNE2-208ENST00000553289 TP53AIP1Q9HCN2 124 aa7.96□□□□□ -1.13
SYNE2-208ENST00000553289 X6R8D5 127 aa7.96□□□□□ -1.14
SYNE2-208ENST00000553289 CRYGAP11844 174 aa7.96□□□□□ -1.14
SYNE2-208ENST00000553289 LINC00167Q96N53 147 aa7.95□□□□□ -1.14
SYNE2-208ENST00000553289 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms