RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 TRBV7-3A0A075B6L6 115 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 MUC21A0A140T8X8 626 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 H0Y9J4 135 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 M0R381 172 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 IGLV7-43P04211 117 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 NTF3P20783 257 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 MPV17L2Q567V2 206 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 BAGE3Q86Y29 109 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 LINC00337Q8N6G1 96 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 Q8NBF4 154 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 OR10AG1Q8NH19 301 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 CHCHD10Q8WYQ3 142 aaPredicted RBP3.07□□□□□ -1.92
CKAP4-203ENST00000553039 AP1S3Q96PC3 154 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 LITAFQ99732 161 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 TMEM191AQ9H0A3 160 aa3.07□□□□□ -1.92
CKAP4-203ENST00000553039 A0A096LNI7 61 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 PPBPP02775 128 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 SMIM17P0DL12 118 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 RNASE3P12724 160 aaKnown RBP3.06□□□□□ -1.92
CKAP4-203ENST00000553039 AKR1D1P51857 326 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 RBX1P62877 108 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 REG3AQ06141 175 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 PDZD11Q5EBL8 140 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 FAM104BQ5XKR9 115 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 AMN1Q8IY45 258 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 ORMDL3Q8N138 153 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 HIST3H2BBQ8N257 126 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 C14orf178Q8N769 122 aaPredicted RBP3.06□□□□□ -1.92
CKAP4-203ENST00000553039 C18orf32Q8TCD1 76 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 Q9UF83 564 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 LAMTOR2Q9Y2Q5 125 aa3.06□□□□□ -1.92
CKAP4-203ENST00000553039 D6R8Y8 96 aa3.05□□□□□ -1.92
CKAP4-203ENST00000553039 SERF1AO75920 110 aa3.05□□□□□ -1.92
CKAP4-203ENST00000553039 ESDP10768 282 aa3.05□□□□□ -1.92
CKAP4-203ENST00000553039 FABP4P15090 132 aa3.05□□□□□ -1.92
CKAP4-203ENST00000553039 CKS2P33552 79 aa3.05□□□□□ -1.92
CKAP4-203ENST00000553039 UBE2D3P61077 147 aa3.05□□□□□ -1.92
CKAP4-203ENST00000553039 UBE2D2P62837 147 aa3.05□□□□□ -1.92
CKAP4-203ENST00000553039 MRPL51Q4U2R6 128 aaKnown RBP3.05□□□□□ -1.92
CKAP4-203ENST00000553039 CHCHD1Q96BP2 118 aaKnown RBP3.05□□□□□ -1.92
CKAP4-203ENST00000553039 MRAP2Q96G30 205 aa3.05□□□□□ -1.92
CKAP4-203ENST00000553039 PACRGQ96M98 296 aaPredicted RBP3.05□□□□□ -1.92
CKAP4-203ENST00000553039 PRELID3AQ96N28 172 aa3.05□□□□□ -1.92
CKAP4-203ENST00000553039 HIST1H2BLQ99880 126 aa3.05□□□□□ -1.92
CKAP4-203ENST00000553039 LOC100996750A0A140TA64 210 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 A6NDN8 102 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 IFITM10A6NMD0 228 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 NCR2O95944 276 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 PPP1R17O96001 155 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 MGPP08493 103 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 LINC00614P0C842 121 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 SMIM6P0DI80 62 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 RAB4AP20338 218 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 CTAG1AP78358 180 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 IQCJQ1A5X6 159 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 ASB16-AS1Q495Z4 193 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 CLPSL2Q6UWE3 100 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 FA2HQ7L5A8 372 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 MAP1LC3AQ9H492 121 aa3.04□□□□□ -1.92
CKAP4-203ENST00000553039 TRBV25-1A0A075B6N4 114 aa3.03□□□□□ -1.92
CKAP4-203ENST00000553039 SMKR1H3BMG3 65 aa3.03□□□□□ -1.92
CKAP4-203ENST00000553039 NPYP01303 97 aa3.03□□□□□ -1.92
CKAP4-203ENST00000553039 ZNF56Q15929 161 aa3.03□□□□□ -1.92
CKAP4-203ENST00000553039 FAM74A4Q5TZK3 123 aa3.03□□□□□ -1.92
CKAP4-203ENST00000553039 Q8N9P0 234 aaPredicted RBP3.03□□□□□ -1.92
CKAP4-203ENST00000553039 OR10D4PQ8NGN7 298 aa3.03□□□□□ -1.92
CKAP4-203ENST00000553039 NXT2Q9NPJ8 142 aaKnown RBP3.03□□□□□ -1.92
CKAP4-203ENST00000553039 V9GYY9 64 aa3.03□□□□□ -1.92
CKAP4-203ENST00000553039 IGHV1-24A0A0C4DH33 117 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 LOC389332A0A1B0GUA5 103 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 K7EMI3 77 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 NUPR1O60356 82 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 KRTAP1-4P0C5Y4 121 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 FGF6P10767 208 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 IFI27P40305 119 aaPredicted RBP3.02□□□□□ -1.93
CKAP4-203ENST00000553039 HIGD2BQ4VC39 106 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 LCE5AQ5TCM9 118 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 C2orf66Q6UXQ4 117 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 Q6ZN92 141 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 LINC00173Q6ZV60 143 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 FAM19A2Q8N3H0 131 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 NKAPP1Q8N9T2 125 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 TYMSOSQ8TAI1 123 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 C12orf57Q99622 126 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 C20orf78Q9BR46 151 aa3.02□□□□□ -1.93
CKAP4-203ENST00000553039 GVQW2A0A096LPI5 108 aaPredicted RBP3.01□□□□□ -1.93
CKAP4-203ENST00000553039 LOC107984640A0A0U1RRK4 108 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 A0A1W2PNN7 141 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 LEPROTL1O95214 131 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 HBDP02042 147 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 KRTDAPP60985 99 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 JOSD1Q15040 202 aaPredicted RBP3.01□□□□□ -1.93
CKAP4-203ENST00000553039 PMCHL1Q16048 86 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 ORMDL2Q53FV1 153 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 Q8N8P6 123 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 C15orf56Q8N910 161 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 CARD19Q96LW7 228 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 OPRPNQ99935 248 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms