RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 PMVKQ15126 192 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 HIGD2BQ4VC39 106 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 C14orf177Q52M58 125 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 Q6ZN92 141 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 C5orf38Q86SI9 138 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 BAGE3Q86Y29 109 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 LINC01561Q8N1V8 128 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 VCX2Q9H322 139 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 IGLV5-52A0A0A0MRZ9 124 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 TRAV12-1A0A0B4J245 112 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 TINCRA0A1B0GVN0 87 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 SMIM1B2RUZ4 78 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 PANO1I0J062 215 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 HSBP1O75506 76 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 CIRBPQ14011 172 aaKnown RBP4.94□□□□□ -1.62
NPAS3-213ENST00000552874 LINC01620Q4KN68 170 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 PAPPA-AS1Q5QFB9 102 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 C9orf163Q8N9P6 203 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 OR10D4PQ8NGN7 298 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 LINC00526Q96FQ7 95 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 FAM30AQ9NZY2 134 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 CDKN2A-AS1Q9UH64 79 aa4.94□□□□□ -1.62
NPAS3-213ENST00000552874 SRRM2Q9UQ35 2752 aaKnown RBP4.94□□□□□ -1.62
NPAS3-213ENST00000552874 LRP1Q07954 4544 aaKnown RBP4.94□□□□□ -1.62
NPAS3-213ENST00000552874 hDV102S1A0JD36 115 aa4.93□□□□□ -1.62
NPAS3-213ENST00000552874 C11orf86A6NJI1 115 aa4.93□□□□□ -1.62
NPAS3-213ENST00000552874 ATP5LO75964 103 aa4.93□□□□□ -1.62
NPAS3-213ENST00000552874 ZNF22P17026 224 aaPredicted RBP4.93□□□□□ -1.62
NPAS3-213ENST00000552874 XGP55808 180 aa4.93□□□□□ -1.62
NPAS3-213ENST00000552874 HERVK_113P63121 156 aa4.93□□□□□ -1.62
NPAS3-213ENST00000552874 JOSD1Q15040 202 aaPredicted RBP4.93□□□□□ -1.62
NPAS3-213ENST00000552874 HIST3H2BBQ8N257 126 aa4.93□□□□□ -1.62
NPAS3-213ENST00000552874 IFI27L1Q96BM0 104 aa4.93□□□□□ -1.62
NPAS3-213ENST00000552874 PACRGQ96M98 296 aaPredicted RBP4.93□□□□□ -1.62
NPAS3-213ENST00000552874 IGLV5-39A0A0G2JS06 123 aa4.92□□□□□ -1.62
NPAS3-213ENST00000552874 M0R143 59 aa4.92□□□□□ -1.62
NPAS3-213ENST00000552874 CDK2AP2O75956 126 aa4.92□□□□□ -1.62
NPAS3-213ENST00000552874 GCSHP23434 173 aa4.92□□□□□ -1.62
NPAS3-213ENST00000552874 SPAG11BQ08648 103 aa4.92□□□□□ -1.62
NPAS3-213ENST00000552874 SDIM1Q6ZPB5 146 aa4.92□□□□□ -1.62
NPAS3-213ENST00000552874 Q6ZRU5 148 aa4.92□□□□□ -1.62
NPAS3-213ENST00000552874 ORAOV1Q8WV07 137 aa4.92□□□□□ -1.62
NPAS3-213ENST00000552874 C2orf48Q96LS8 159 aa4.92□□□□□ -1.62
NPAS3-213ENST00000552874 CHAC1Q9BUX1 264 aa4.92□□□□□ -1.62
NPAS3-213ENST00000552874 TNXBP22105 4242 aa4.91□□□□□ -1.62
NPAS3-213ENST00000552874 LEPROTL1O95214 131 aa4.91□□□□□ -1.62
NPAS3-213ENST00000552874 C10orf25Q5T742 122 aa4.91□□□□□ -1.62
NPAS3-213ENST00000552874 SNHG12Q9BXW3 62 aa4.91□□□□□ -1.62
NPAS3-213ENST00000552874 MRPL35Q9NZE8 188 aaKnown RBP4.91□□□□□ -1.62
NPAS3-213ENST00000552874 F8VRH5 84 aa4.9□□□□□ -1.63
NPAS3-213ENST00000552874 SEC11AP67812 179 aa4.9□□□□□ -1.63
NPAS3-213ENST00000552874 Q8IZM0 81 aa4.9□□□□□ -1.63
NPAS3-213ENST00000552874 CARD19Q96LW7 228 aa4.9□□□□□ -1.63
NPAS3-213ENST00000552874 C6orf48Q9UBA6 75 aa4.9□□□□□ -1.63
NPAS3-213ENST00000552874 EPM2AB3EWF7 344 aa4.89□□□□□ -1.63
NPAS3-213ENST00000552874 APOMO95445 188 aa4.89□□□□□ -1.63
NPAS3-213ENST00000552874 SPINK8P0C7L1 97 aa4.89□□□□□ -1.63
NPAS3-213ENST00000552874 MALP21145 153 aa4.89□□□□□ -1.63
NPAS3-213ENST00000552874 HAMPP81172 84 aa4.89□□□□□ -1.63
NPAS3-213ENST00000552874 SYCNQ0VAF6 134 aa4.89□□□□□ -1.63
NPAS3-213ENST00000552874 MAJINQ3KP22 176 aa4.89□□□□□ -1.63
NPAS3-213ENST00000552874 SPACA4Q8TDM5 124 aa4.89□□□□□ -1.63
NPAS3-213ENST00000552874 PRO1933Q9H354 126 aa4.89□□□□□ -1.63
NPAS3-213ENST00000552874 GEMIN7Q9H840 131 aaKnown RBP4.89□□□□□ -1.63
NPAS3-213ENST00000552874 A0A096LNI7 61 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 F8WDY8 70 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 TLX1NBP0CAT3 122 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 CHTF8P0CG12 524 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 FABP4P15090 132 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 NDUFA6P56556 154 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 RNF151Q2KHN1 245 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 LINC01545Q5VT33 79 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 C2orf82Q6UX34 121 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 UNQ6190/PRO20217Q6UXQ8 127 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 SCXQ7RTU7 201 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 HSPB8Q9UJY1 196 aa4.88□□□□□ -1.63
NPAS3-213ENST00000552874 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.87□□□□□ -1.63
NPAS3-213ENST00000552874 SYS1-DBNDD2H3BUS1 97 aa4.87□□□□□ -1.63
NPAS3-213ENST00000552874 ZNF561-AS1K7EIQ3 104 aa4.87□□□□□ -1.63
NPAS3-213ENST00000552874 C3orf79P0CE67 100 aa4.87□□□□□ -1.63
NPAS3-213ENST00000552874 TSPEAR-AS2P59090 65 aa4.87□□□□□ -1.63
NPAS3-213ENST00000552874 KRTAP10-4P60372 401 aaPredicted RBP4.87□□□□□ -1.63
NPAS3-213ENST00000552874 ZNF625Q96I27 306 aaPredicted RBP4.87□□□□□ -1.63
NPAS3-213ENST00000552874 CAMK2N2Q96S95 79 aa4.87□□□□□ -1.63
NPAS3-213ENST00000552874 HIST1H2BLQ99880 126 aa4.87□□□□□ -1.63
NPAS3-213ENST00000552874 PMCHL2Q9BQD1 86 aa4.87□□□□□ -1.63
NPAS3-213ENST00000552874 FLG2Q5D862 2391 aaPredicted RBP4.87□□□□□ -1.63
NPAS3-213ENST00000552874 TRBV30A0A0K0K1B3 111 aa4.86□□□□□ -1.63
NPAS3-213ENST00000552874 NDUFA1O15239 70 aa4.86□□□□□ -1.63
NPAS3-213ENST00000552874 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
NPAS3-213ENST00000552874 Q6ZRP5 223 aa4.86□□□□□ -1.63
NPAS3-213ENST00000552874 KRTAP7-1Q8IUC3 87 aa4.86□□□□□ -1.63
NPAS3-213ENST00000552874 CIRBP-AS1Q8TBR5 109 aa4.86□□□□□ -1.63
NPAS3-213ENST00000552874 COX7B2Q8TF08 81 aa4.86□□□□□ -1.63
NPAS3-213ENST00000552874 KRTAP4-5Q9BYR2 181 aa4.86□□□□□ -1.63
NPAS3-213ENST00000552874 H3BRM9 83 aa4.85□□□□□ -1.63
NPAS3-213ENST00000552874 PLNP26678 52 aa4.85□□□□□ -1.63
NPAS3-213ENST00000552874 CXCL5P42830 114 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms