RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 OVOL2Q9BRP0 275 aa3.81□□□□□ -1.8
LIMA1-212ENST00000552491 WFDC10AQ9H1F0 79 aa3.81□□□□□ -1.8
LIMA1-212ENST00000552491 BAHCC1Q9P281 2608 aa3.81□□□□□ -1.8
LIMA1-212ENST00000552491 IGLV4-60A0A075B6I1 120 aa3.81□□□□□ -1.8
LIMA1-212ENST00000552491 COX7B2Q8TF08 81 aa3.81□□□□□ -1.8
LIMA1-212ENST00000552491 TMEM243Q9BU79 118 aa3.81□□□□□ -1.8
LIMA1-212ENST00000552491 TOMM7Q9P0U1 55 aa3.81□□□□□ -1.8
LIMA1-212ENST00000552491 A0A1W2PRX2 142 aa3.8□□□□□ -1.8
LIMA1-212ENST00000552491 CCL18P55774 89 aa3.8□□□□□ -1.8
LIMA1-212ENST00000552491 GAGE2AQ6NT46 116 aa3.8□□□□□ -1.8
LIMA1-212ENST00000552491 C3orf22Q8N5N4 141 aa3.8□□□□□ -1.8
LIMA1-212ENST00000552491 SMIM11BQ8TCY0 68 aa3.8□□□□□ -1.8
LIMA1-212ENST00000552491 SND1-IT1Q9HBX3 110 aa3.8□□□□□ -1.8
LIMA1-212ENST00000552491 ITPR3Q14573 2671 aa3.8□□□□□ -1.8
LIMA1-212ENST00000552491 H0YGX0 51 aa3.8□□□□□ -1.8
LIMA1-212ENST00000552491 UQCRQO14949 82 aa3.8□□□□□ -1.8
LIMA1-212ENST00000552491 APCP25054 2843 aa3.79□□□□□ -1.8
LIMA1-212ENST00000552491 IGHV3OR16-9A0A0B4J2B5 98 aa3.79□□□□□ -1.8
LIMA1-212ENST00000552491 DNAL4O96015 105 aa3.79□□□□□ -1.8
LIMA1-212ENST00000552491 CFAP161Q6P656 301 aa3.79□□□□□ -1.8
LIMA1-212ENST00000552491 LINC00526Q96FQ7 95 aa3.79□□□□□ -1.8
LIMA1-212ENST00000552491 UBR5O95071 2799 aaPredicted RBP3.79□□□□□ -1.8
LIMA1-212ENST00000552491 ANK3Q12955 4377 aaKnown RBP3.79□□□□□ -1.8
LIMA1-212ENST00000552491 TRBV6-4A0A1B0GX49 114 aa3.79□□□□□ -1.8
LIMA1-212ENST00000552491 LINC00158P58513 81 aa3.79□□□□□ -1.8
LIMA1-212ENST00000552491 C9orf153Q5TBE3 101 aa3.79□□□□□ -1.8
LIMA1-212ENST00000552491 C14orf132Q9NPU4 83 aa3.79□□□□□ -1.8
LIMA1-212ENST00000552491 KLK5Q9Y337 293 aaPredicted RBP3.79□□□□□ -1.8
LIMA1-212ENST00000552491 TENM4Q6N022 2769 aa3.79□□□□□ -1.8
LIMA1-212ENST00000552491 IBA57-AS1B1ANH7 110 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 PFN2P35080 140 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 OBSCN-AS1Q96MR7 158 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 NBEAL2Q6ZNJ1 2754 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 ACANP16112 2415 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 MTORP42345 2549 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 FLNAP21333 2647 aaKnown RBP3.78□□□□□ -1.8
LIMA1-212ENST00000552491 TRGV2A0A075B6R0 118 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 SLPIP03973 132 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 RPL35AP18077 110 aaKnown RBP3.78□□□□□ -1.8
LIMA1-212ENST00000552491 C16orf74Q96GX8 76 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 C2orf48Q96LS8 159 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 CYSTM1Q9H1C7 97 aa3.78□□□□□ -1.8
LIMA1-212ENST00000552491 A0A087WZ39 114 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 CCL24O00175 119 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 LECT2O14960 151 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 COX7CP15954 63 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 HIST1H4AP62805 103 aaKnown RBP3.77□□□□□ -1.81
LIMA1-212ENST00000552491 LRRC75A-AS1Q8N1F1 130 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 C11orf68Q9H3H3 251 aaKnown RBP3.77□□□□□ -1.81
LIMA1-212ENST00000552491 LINC00846Q9NV44 126 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 TRBV6-8A0A0A6YYG3 113 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 IGKV3D-7A0A0C4DH55 119 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 ATOX1O00244 68 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 NCR3O14931 201 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 CMC4P56277 68 aaPredicted RBP3.77□□□□□ -1.81
LIMA1-212ENST00000552491 FHL2Q14192 279 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 SS18Q15532 418 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 CSNK1G2-AS1Q8NCQ2 148 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 ESM1Q9NQ30 184 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 C19orf73Q9NVV2 129 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 TRGV4A0A0C4DH28 118 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 TMEM86BQ8N661 226 aa3.77□□□□□ -1.81
LIMA1-212ENST00000552491 A0A087WVE0 104 aa3.76□□□□□ -1.81
LIMA1-212ENST00000552491 CRYGAP11844 174 aa3.76□□□□□ -1.81
LIMA1-212ENST00000552491 PRR3P79522 188 aaKnown RBP3.76□□□□□ -1.81
LIMA1-212ENST00000552491 Q6JHZ5 121 aa3.76□□□□□ -1.81
LIMA1-212ENST00000552491 LINC00959A0A1B0GUT2 108 aa3.76□□□□□ -1.81
LIMA1-212ENST00000552491 DNAJC9-AS1A6NH13 148 aa3.76□□□□□ -1.81
LIMA1-212ENST00000552491 LY6G6DO95868 133 aa3.76□□□□□ -1.81
LIMA1-212ENST00000552491 OR13C6PQ8NH95 151 aa3.76□□□□□ -1.81
LIMA1-212ENST00000552491 LOC107984640A0A0U1RRK4 108 aa3.75□□□□□ -1.81
LIMA1-212ENST00000552491 NANOS2P60321 138 aaKnown RBP3.75□□□□□ -1.81
LIMA1-212ENST00000552491 RPL18AQ02543 176 aaKnown RBP3.75□□□□□ -1.81
LIMA1-212ENST00000552491 DEFB113Q30KQ7 82 aa3.75□□□□□ -1.81
LIMA1-212ENST00000552491 C6orf226Q5I0X4 101 aa3.75□□□□□ -1.81
LIMA1-212ENST00000552491 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.75□□□□□ -1.81
LIMA1-212ENST00000552491 FLNBO75369 2602 aaKnown RBP3.75□□□□□ -1.81
LIMA1-212ENST00000552491 XCL1P47992 114 aa3.75□□□□□ -1.81
LIMA1-212ENST00000552491 CLPSL2Q6UWE3 100 aa3.75□□□□□ -1.81
LIMA1-212ENST00000552491 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
LIMA1-212ENST00000552491 ORMDL1Q9P0S3 153 aa3.75□□□□□ -1.81
LIMA1-212ENST00000552491 GHRHP01286 108 aa3.74□□□□□ -1.81
LIMA1-212ENST00000552491 A0A1B0GX51 115 aa3.74□□□□□ -1.81
LIMA1-212ENST00000552491 hADV29S1A0JD25 119 aa3.74□□□□□ -1.81
LIMA1-212ENST00000552491 CCKP06307 115 aa3.74□□□□□ -1.81
LIMA1-212ENST00000552491 Q8IZM0 81 aa3.74□□□□□ -1.81
LIMA1-212ENST00000552491 Q8NDZ9 215 aa3.74□□□□□ -1.81
LIMA1-212ENST00000552491 LINC00167Q96N53 147 aa3.74□□□□□ -1.81
LIMA1-212ENST00000552491 KRTAP9-3Q9BYQ3 159 aa3.74□□□□□ -1.81
LIMA1-212ENST00000552491 A0A096LPF7 62 aa3.73□□□□□ -1.81
LIMA1-212ENST00000552491 JMJD7-PLA2G4BH0Y9G9 81 aa3.73□□□□□ -1.81
LIMA1-212ENST00000552491 IGLV1-51P01701 117 aa3.73□□□□□ -1.81
LIMA1-212ENST00000552491 DEFB130BP0DP73 79 aa3.73□□□□□ -1.81
LIMA1-212ENST00000552491 DEFB130AP0DP74 79 aa3.73□□□□□ -1.81
LIMA1-212ENST00000552491 HECTD1Q9ULT8 2610 aa3.73□□□□□ -1.81
LIMA1-212ENST00000552491 VWFP04275 2813 aa3.73□□□□□ -1.81
LIMA1-212ENST00000552491 A0A1B0GUV1 79 aa3.73□□□□□ -1.81
LIMA1-212ENST00000552491 SERP2Q8N6R1 65 aa3.73□□□□□ -1.81
LIMA1-212ENST00000552491 WFDC11Q8NEX6 87 aa3.73□□□□□ -1.81
LIMA1-212ENST00000552491 LINC01006Q8NI28 216 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms