RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 LINC01549A6NIU2 74 aa8.79□□□□□ -1
DDX54-210ENST00000552375 PRSS2P07478 247 aa8.79□□□□□ -1
DDX54-210ENST00000552375 SPINK8P0C7L1 97 aa8.79□□□□□ -1
DDX54-210ENST00000552375 SEC11AP67812 179 aa8.79□□□□□ -1
DDX54-210ENST00000552375 MRPL35Q9NZE8 188 aaKnown RBP8.79□□□□□ -1
DDX54-210ENST00000552375 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
DDX54-210ENST00000552375 C9orf116Q5BN46 136 aaPredicted RBP8.78□□□□□ -1
DDX54-210ENST00000552375 PDZD11Q5EBL8 140 aa8.78□□□□□ -1
DDX54-210ENST00000552375 SERTAD4-AS1Q5TG53 156 aa8.78□□□□□ -1
DDX54-210ENST00000552375 BAGE3Q86Y29 109 aa8.78□□□□□ -1
DDX54-210ENST00000552375 SMIM1B2RUZ4 78 aa8.77□□□□□ -1.01
DDX54-210ENST00000552375 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
DDX54-210ENST00000552375 GAGE2EQ4V326 116 aa8.77□□□□□ -1.01
DDX54-210ENST00000552375 LINC01561Q8N1V8 128 aa8.77□□□□□ -1.01
DDX54-210ENST00000552375 GAGE2DQ9UEU5 116 aa8.77□□□□□ -1.01
DDX54-210ENST00000552375 TNXBP22105 4242 aa8.76□□□□□ -1.01
DDX54-210ENST00000552375 COLCA2A8K830 154 aa8.76□□□□□ -1.01
DDX54-210ENST00000552375 CKS1BP61024 79 aa8.76□□□□□ -1.01
DDX54-210ENST00000552375 FAM19A2Q8N3H0 131 aa8.76□□□□□ -1.01
DDX54-210ENST00000552375 CHCHD1Q96BP2 118 aaKnown RBP8.76□□□□□ -1.01
DDX54-210ENST00000552375 F8WDY8 70 aa8.75□□□□□ -1.01
DDX54-210ENST00000552375 HSBP1O75506 76 aa8.75□□□□□ -1.01
DDX54-210ENST00000552375 RNF151Q2KHN1 245 aa8.75□□□□□ -1.01
DDX54-210ENST00000552375 C6orf226Q5I0X4 101 aa8.75□□□□□ -1.01
DDX54-210ENST00000552375 Q6ZRP5 223 aa8.75□□□□□ -1.01
DDX54-210ENST00000552375 Q8IZM0 81 aa8.75□□□□□ -1.01
DDX54-210ENST00000552375 UBR4Q5T4S7 5183 aa8.74□□□□□ -1.01
DDX54-210ENST00000552375 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
DDX54-210ENST00000552375 TRBV30A0A0K0K1B3 111 aa8.74□□□□□ -1.01
DDX54-210ENST00000552375 A0A1W2PNN7 141 aa8.74□□□□□ -1.01
DDX54-210ENST00000552375 FAM168BA1KXE4 195 aa8.74□□□□□ -1.01
DDX54-210ENST00000552375 ATP5LO75964 103 aa8.74□□□□□ -1.01
DDX54-210ENST00000552375 MT1HL1P0DM35 61 aa8.74□□□□□ -1.01
DDX54-210ENST00000552375 IGLC3P0DOY3 106 aa8.74□□□□□ -1.01
DDX54-210ENST00000552375 COX7B2Q8TF08 81 aa8.74□□□□□ -1.01
DDX54-210ENST00000552375 H0Y8G0 127 aa8.73□□□□□ -1.01
DDX54-210ENST00000552375 SERF1AO75920 110 aa8.73□□□□□ -1.01
DDX54-210ENST00000552375 ZNF22P17026 224 aaPredicted RBP8.73□□□□□ -1.01
DDX54-210ENST00000552375 LINC00310P59036 64 aa8.73□□□□□ -1.01
DDX54-210ENST00000552375 FAM19A5Q7Z5A7 132 aaPredicted RBP8.73□□□□□ -1.01
DDX54-210ENST00000552375 C11orf86A6NJI1 115 aa8.72□□□□□ -1.01
DDX54-210ENST00000552375 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
DDX54-210ENST00000552375 H3BRM9 83 aa8.71□□□□□ -1.02
DDX54-210ENST00000552375 TLX1NBP0CAT3 122 aa8.71□□□□□ -1.02
DDX54-210ENST00000552375 IFI27L1Q96BM0 104 aa8.71□□□□□ -1.02
DDX54-210ENST00000552375 CHTOPQ9Y3Y2 248 aaKnown RBP8.71□□□□□ -1.02
DDX54-210ENST00000552375 F8VRH5 84 aa8.7□□□□□ -1.02
DDX54-210ENST00000552375 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
DDX54-210ENST00000552375 PLA2G2DQ9UNK4 145 aa8.7□□□□□ -1.02
DDX54-210ENST00000552375 NDUFC2-KCTD14E9PQ53 114 aa8.69□□□□□ -1.02
DDX54-210ENST00000552375 NUPR1O60356 82 aa8.69□□□□□ -1.02
DDX54-210ENST00000552375 C9orf129Q5T035 196 aaKnown RBP8.69□□□□□ -1.02
DDX54-210ENST00000552375 CXCL5P42830 114 aa8.68□□□□□ -1.02
DDX54-210ENST00000552375 XAGE1AQ9HD64 81 aa8.68□□□□□ -1.02
DDX54-210ENST00000552375 FABP4P15090 132 aa8.67□□□□□ -1.02
DDX54-210ENST00000552375 M0QXV9 152 aa8.66□□□□□ -1.02
DDX54-210ENST00000552375 LEPROTL1O95214 131 aa8.66□□□□□ -1.02
DDX54-210ENST00000552375 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
DDX54-210ENST00000552375 TRAV12-1A0A0B4J245 112 aa8.65□□□□□ -1.02
DDX54-210ENST00000552375 IGLV5-39A0A0G2JS06 123 aa8.65□□□□□ -1.02
DDX54-210ENST00000552375 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.02
DDX54-210ENST00000552375 LINC01600Q96MT4 127 aa8.65□□□□□ -1.02
DDX54-210ENST00000552375 HIST1H2BKO60814 126 aa8.64□□□□□ -1.03
DDX54-210ENST00000552375 HIST1H2BJP06899 126 aa8.64□□□□□ -1.03
DDX54-210ENST00000552375 HIST1H2BOP23527 126 aa8.64□□□□□ -1.03
DDX54-210ENST00000552375 HIST1H2BBP33778 126 aa8.64□□□□□ -1.03
DDX54-210ENST00000552375 HIST1H2BDP58876 126 aa8.64□□□□□ -1.03
DDX54-210ENST00000552375 HIST1H2BCP62807 126 aa8.64□□□□□ -1.03
DDX54-210ENST00000552375 HIST2H2BEQ16778 126 aa8.64□□□□□ -1.03
DDX54-210ENST00000552375 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.64□□□□□ -1.03
DDX54-210ENST00000552375 HIST1H2BHQ93079 126 aa8.64□□□□□ -1.03
DDX54-210ENST00000552375 ZNF625Q96I27 306 aaPredicted RBP8.64□□□□□ -1.03
DDX54-210ENST00000552375 HIST1H2BNQ99877 126 aa8.64□□□□□ -1.03
DDX54-210ENST00000552375 HIST1H2BMQ99879 126 aa8.64□□□□□ -1.03
DDX54-210ENST00000552375 PFN2P35080 140 aa8.63□□□□□ -1.03
DDX54-210ENST00000552375 ODF1Q14990 250 aa8.63□□□□□ -1.03
DDX54-210ENST00000552375 REG3GQ6UW15 175 aa8.63□□□□□ -1.03
DDX54-210ENST00000552375 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
DDX54-210ENST00000552375 PSORS1C2Q9UIG4 136 aa8.63□□□□□ -1.03
DDX54-210ENST00000552375 TMEM223A0PJW6 202 aa8.62□□□□□ -1.03
DDX54-210ENST00000552375 UBE2BP63146 152 aa8.62□□□□□ -1.03
DDX54-210ENST00000552375 SRSF9Q13242 221 aaKnown RBP eCLIP8.62□□□□□ -1.03
DDX54-210ENST00000552375 PMCHL2Q9BQD1 86 aa8.62□□□□□ -1.03
DDX54-210ENST00000552375 C1orf137Q5JT78 98 aa8.61□□□□□ -1.03
DDX54-210ENST00000552375 HSPB8Q9UJY1 196 aa8.61□□□□□ -1.03
DDX54-210ENST00000552375 LRP2P98164 4655 aa8.6□□□□□ -1.03
DDX54-210ENST00000552375 ATP6V1G1O75348 118 aa8.59□□□□□ -1.03
DDX54-210ENST00000552375 ERG28Q9UKR5 140 aa8.59□□□□□ -1.03
DDX54-210ENST00000552375 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
DDX54-210ENST00000552375 C22orf24Q9Y442 160 aa8.58□□□□□ -1.04
DDX54-210ENST00000552375 GAGE10A6NGK3 116 aa8.56□□□□□ -1.04
DDX54-210ENST00000552375 DPM2O94777 84 aa8.56□□□□□ -1.04
DDX54-210ENST00000552375 TSPEAR-AS2P59090 65 aa8.56□□□□□ -1.04
DDX54-210ENST00000552375 MAP1LC3CQ9BXW4 147 aa8.56□□□□□ -1.04
DDX54-210ENST00000552375 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
DDX54-210ENST00000552375 IGKCP01834 107 aa8.54□□□□□ -1.04
DDX54-210ENST00000552375 IGLV7-43P04211 117 aa8.54□□□□□ -1.04
DDX54-210ENST00000552375 PLNP26678 52 aa8.54□□□□□ -1.04
DDX54-210ENST00000552375 LINC00158P58513 81 aa8.54□□□□□ -1.04
DDX54-210ENST00000552375 MEIG1Q5JSS6 88 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms