RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 SRSF9Q13242 221 aaKnown RBP eCLIP5.58□□□□□ -1.52
RBFOX1-213ENST00000551752 LYPD5Q6UWN5 251 aa5.58□□□□□ -1.52
RBFOX1-213ENST00000551752 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
RBFOX1-213ENST00000551752 PLEKHB2Q96CS7 222 aa5.58□□□□□ -1.52
RBFOX1-213ENST00000551752 JPT2Q9H910 190 aa5.58□□□□□ -1.52
RBFOX1-213ENST00000551752 MRPL16Q9NX20 251 aaKnown RBP5.58□□□□□ -1.52
RBFOX1-213ENST00000551752 I3L3M4 83 aa5.57□□□□□ -1.52
RBFOX1-213ENST00000551752 K7EQD1 137 aa5.57□□□□□ -1.52
RBFOX1-213ENST00000551752 LEPROTO15243 131 aa5.57□□□□□ -1.52
RBFOX1-213ENST00000551752 RS1O15537 224 aa5.57□□□□□ -1.52
RBFOX1-213ENST00000551752 LGALS3P17931 250 aaKnown RBP5.57□□□□□ -1.52
RBFOX1-213ENST00000551752 FAM74A4Q5TZK3 123 aa5.57□□□□□ -1.52
RBFOX1-213ENST00000551752 C10orf126Q8N4M7 172 aa5.57□□□□□ -1.52
RBFOX1-213ENST00000551752 PRO0461Q9UI25 63 aa5.57□□□□□ -1.52
RBFOX1-213ENST00000551752 FAT2Q9NYQ8 4349 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 A8MWV9 139 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 J3QQQ9 107 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 DNAH10OSP0CZ25 163 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 SCGB1A1P11684 91 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 RPL39P62891 51 aaKnown RBP5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 RPL36AP83881 106 aaKnown RBP5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 WFDC2Q14508 124 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 TMEM170BQ5T4T1 132 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 SERTAD4-AS1Q5TG53 156 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 SLC25A29Q8N8R3 303 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 C20orf203Q8NBC4 194 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 ATP6V0E2Q8NHE4 81 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 DNAH2Q9P225 4427 aa5.56□□□□□ -1.52
RBFOX1-213ENST00000551752 TMEM223A0PJW6 202 aa5.55□□□□□ -1.52
RBFOX1-213ENST00000551752 H3BMG7 143 aa5.55□□□□□ -1.52
RBFOX1-213ENST00000551752 CDK2AP2O75956 126 aa5.55□□□□□ -1.52
RBFOX1-213ENST00000551752 TSPAN13O95857 204 aa5.55□□□□□ -1.52
RBFOX1-213ENST00000551752 IGHV3-30P01768 117 aa5.55□□□□□ -1.52
RBFOX1-213ENST00000551752 IGHV3-30-5P0DP03 117 aa5.55□□□□□ -1.52
RBFOX1-213ENST00000551752 TSPEAR-AS2P59090 65 aa5.55□□□□□ -1.52
RBFOX1-213ENST00000551752 CFAP126Q5VTH2 177 aa5.55□□□□□ -1.52
RBFOX1-213ENST00000551752 IGHV3-53P01767 116 aa5.54□□□□□ -1.52
RBFOX1-213ENST00000551752 ZNF22P17026 224 aaPredicted RBP5.54□□□□□ -1.52
RBFOX1-213ENST00000551752 UBE2D3P61077 147 aa5.54□□□□□ -1.52
RBFOX1-213ENST00000551752 UBE2D2P62837 147 aa5.54□□□□□ -1.52
RBFOX1-213ENST00000551752 Q6ZRN7 208 aaPredicted RBP5.54□□□□□ -1.52
RBFOX1-213ENST00000551752 AMELXQ99217 191 aa5.54□□□□□ -1.52
RBFOX1-213ENST00000551752 VCX2Q9H322 139 aa5.54□□□□□ -1.52
RBFOX1-213ENST00000551752 PYGO1Q9Y3Y4 419 aa5.54□□□□□ -1.52
RBFOX1-213ENST00000551752 IGLV5-37A0A075B6J1 123 aa5.53□□□□□ -1.52
RBFOX1-213ENST00000551752 IGLV4-3A0A075B6K6 122 aa5.53□□□□□ -1.52
RBFOX1-213ENST00000551752 TRBV20-1A0A075B6N2 111 aa5.53□□□□□ -1.52
RBFOX1-213ENST00000551752 APOMO95445 188 aa5.53□□□□□ -1.52
RBFOX1-213ENST00000551752 LINC01556Q5JQF7 62 aa5.53□□□□□ -1.52
RBFOX1-213ENST00000551752 SIGMAR1Q99720 223 aa5.53□□□□□ -1.52
RBFOX1-213ENST00000551752 PKD1P98161 4303 aa5.53□□□□□ -1.52
RBFOX1-213ENST00000551752 PKHD1P08F94 4074 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 A0A0B4J2C4 111 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 LOC107984156A0A0G2JMH3 177 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 TMEM238C9JI98 176 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 PSMB2P49721 201 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 ETDBQ3ZM63 59 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 LELP1Q5T871 98 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 ARL17AQ8IVW1 177 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 DNAJC30Q96LL9 226 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 GTSF1LQ9H1H1 148 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 SPANXA1Q9NS26 97 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 PRO1854Q9UHT4 67 aa5.52□□□□□ -1.53
RBFOX1-213ENST00000551752 IGHV3-38A0A0C4DH36 116 aa5.51□□□□□ -1.53
RBFOX1-213ENST00000551752 A0A0J9YXV3 536 aa5.51□□□□□ -1.53
RBFOX1-213ENST00000551752 TRBV10-1A0A0K0K1A3 114 aa5.51□□□□□ -1.53
RBFOX1-213ENST00000551752 CFC1BP0CG36 223 aa5.51□□□□□ -1.53
RBFOX1-213ENST00000551752 CFC1P0CG37 223 aa5.51□□□□□ -1.53
RBFOX1-213ENST00000551752 LINC00694P0DN24 101 aa5.51□□□□□ -1.53
RBFOX1-213ENST00000551752 PPDPFLQ8WWR9 84 aa5.51□□□□□ -1.53
RBFOX1-213ENST00000551752 OPRPNQ99935 248 aaPredicted RBP5.51□□□□□ -1.53
RBFOX1-213ENST00000551752 TIMM21Q9BVV7 248 aa5.51□□□□□ -1.53
RBFOX1-213ENST00000551752 DNAH11Q96DT5 4516 aa5.51□□□□□ -1.53
RBFOX1-213ENST00000551752 A0A1B0GUV1 79 aa5.5□□□□□ -1.53
RBFOX1-213ENST00000551752 C16orf90A8MZG2 172 aa5.5□□□□□ -1.53
RBFOX1-213ENST00000551752 IBA57-AS1B1ANH7 110 aa5.5□□□□□ -1.53
RBFOX1-213ENST00000551752 M0QXV9 152 aa5.5□□□□□ -1.53
RBFOX1-213ENST00000551752 MRPS36P82909 103 aaKnown RBP5.5□□□□□ -1.53
RBFOX1-213ENST00000551752 GAGE4Q13068 117 aa5.5□□□□□ -1.53
RBFOX1-213ENST00000551752 DEFB104AQ8WTQ1 72 aa5.5□□□□□ -1.53
RBFOX1-213ENST00000551752 CHCHD7Q9BUK0 85 aa5.5□□□□□ -1.53
RBFOX1-213ENST00000551752 HERC2O95714 4834 aa5.49□□□□□ -1.53
RBFOX1-213ENST00000551752 A0A0J9YXY3 114 aa5.49□□□□□ -1.53
RBFOX1-213ENST00000551752 TINCRA0A1B0GVN0 87 aa5.49□□□□□ -1.53
RBFOX1-213ENST00000551752 A4D1N5 150 aa5.49□□□□□ -1.53
RBFOX1-213ENST00000551752 TCL1BO95988 128 aa5.49□□□□□ -1.53
RBFOX1-213ENST00000551752 SCGB1C2P0DMR2 95 aa5.49□□□□□ -1.53
RBFOX1-213ENST00000551752 TEN1Q86WV5 123 aa5.49□□□□□ -1.53
RBFOX1-213ENST00000551752 MTURNQ8N3F0 131 aa5.49□□□□□ -1.53
RBFOX1-213ENST00000551752 ERG28Q9UKR5 140 aa5.49□□□□□ -1.53
RBFOX1-213ENST00000551752 KIAA1109Q2LD37 5005 aa5.49□□□□□ -1.53
RBFOX1-213ENST00000551752 IGHV1-58A0A0C4DH39 117 aa5.48□□□□□ -1.53
RBFOX1-213ENST00000551752 IGHV3-33P01772 117 aa5.48□□□□□ -1.53
RBFOX1-213ENST00000551752 IGHV3-30-3P0DP02 117 aa5.48□□□□□ -1.53
RBFOX1-213ENST00000551752 WFDC10BQ8IUB3 73 aa5.48□□□□□ -1.53
RBFOX1-213ENST00000551752 MUSTN1Q8IVN3 82 aa5.48□□□□□ -1.53
RBFOX1-213ENST00000551752 SPANXDQ9BXN6 97 aa5.48□□□□□ -1.53
RBFOX1-213ENST00000551752 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
RBFOX1-213ENST00000551752 SPANXCQ9NY87 97 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms