RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 TEX261Q6UWH6 196 aa1.1□□□□□ -2.23
PTCH1-223ENST00000551623 C5orf38Q86SI9 138 aa1.1□□□□□ -2.23
PTCH1-223ENST00000551623 LINC01551Q86U37 167 aa1.1□□□□□ -2.23
PTCH1-223ENST00000551623 GATD1Q8NB37 220 aa1.1□□□□□ -2.23
PTCH1-223ENST00000551623 ALKBH7Q9BT30 221 aaPredicted RBP1.1□□□□□ -2.23
PTCH1-223ENST00000551623 FUNDC2Q9BWH2 189 aa1.1□□□□□ -2.23
PTCH1-223ENST00000551623 TMEM126AQ9H061 195 aa1.1□□□□□ -2.23
PTCH1-223ENST00000551623 ZNF706Q9Y5V0 76 aaPredicted RBP1.1□□□□□ -2.23
PTCH1-223ENST00000551623 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
PTCH1-223ENST00000551623 A0A1W2PPV4 95 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 C7orf77A4D0Y5 90 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 NAP1L6A6NFF2 107 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 RPL37AP8A6NKH3 93 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 I3L3M4 83 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 M0R378 163 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 CXorf1O96002 111 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 IFNA1P01562 189 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 IGLV6-57P01721 117 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 MGPP08493 103 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 BTCP35070 178 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 CDC34P49427 236 aaPredicted RBP1.09□□□□□ -2.23
PTCH1-223ENST00000551623 LSM3P62310 102 aaKnown RBP1.09□□□□□ -2.23
PTCH1-223ENST00000551623 MRPS36P82909 103 aaKnown RBP1.09□□□□□ -2.23
PTCH1-223ENST00000551623 SMAGPQ0VAQ4 97 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 Q1RN00 199 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 C2orf82Q6UX34 121 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 FAM231DQ6ZW35 169 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 C9orf62Q8N4C0 152 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 TOMM5Q8N4H5 51 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 C11orf52Q96A22 123 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 PSMG3Q9BT73 122 aaPredicted RBP1.09□□□□□ -2.23
PTCH1-223ENST00000551623 CCDC32Q9BV29 185 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 OCR1Q9BZK8 76 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 RNASE7Q9H1E1 156 aaKnown RBP1.09□□□□□ -2.23
PTCH1-223ENST00000551623 VCX3BQ9H321 246 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 XAGE1AQ9HD64 81 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 LSM5Q9Y4Y9 91 aaKnown RBP1.09□□□□□ -2.23
PTCH1-223ENST00000551623 V9GYH0 126 aa1.09□□□□□ -2.23
PTCH1-223ENST00000551623 TRAV13-1A0A0B4J241 112 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 MUC21A0A140T8X8 626 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 C9orf92A6NGG3 77 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 FAM74A7A6NL05 159 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 RGS5O15539 181 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 SIX6O95475 246 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 S100A9P06702 114 aaKnown RBP1.08□□□□□ -2.24
PTCH1-223ENST00000551623 SPRR2EP22531 72 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 SPRR2BP35325 72 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 SPRR2AP35326 72 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 UBE2G1P62253 170 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 SERF2P84101 59 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 KRTAP5-10Q6L8G5 202 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 Q6ZUT4 128 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 FAM19A3Q7Z5A8 133 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 Q8IZM0 81 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 RPL39LQ96EH5 51 aaKnown RBP1.08□□□□□ -2.24
PTCH1-223ENST00000551623 SMIM12Q96EX1 92 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 C20orf166-AS1Q96NR2 134 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 MARVELD1Q9BSK0 173 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 LIMD2Q9BT23 127 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 NUDT15Q9NV35 164 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 HSPB11Q9Y547 144 aa1.08□□□□□ -2.24
PTCH1-223ENST00000551623 GPR98Q8WXG9 6306 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 A6NN06 94 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 F8VRH5 84 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 HMGB3O15347 200 aaKnown RBP1.07□□□□□ -2.24
PTCH1-223ENST00000551623 MBP02144 154 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 SPRR1AP35321 89 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 CXCL5P42830 114 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 RPL32P62910 135 aaKnown RBP1.07□□□□□ -2.24
PTCH1-223ENST00000551623 MOBPQ13875 183 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 FAM19A1Q7Z5A9 133 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 CBLN2Q8IUK8 224 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 SCGB1C1Q8TD33 95 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 Q9H521 79 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 VCX3AQ9NNX9 186 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 SPANXA1Q9NS26 97 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 TMEM242Q9NWH2 141 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 DHRS4-AS1Q9P1J3 65 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 TNFSF18Q9UNG2 199 aa1.07□□□□□ -2.24
PTCH1-223ENST00000551623 IGKV2-28A0A075B6P5 120 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 A0A087WXM4 84 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 TGIF2-C20orf24A0A0A6YYL0 155 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 XKRY2A2RUG3 117 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 TMEM238C9JI98 176 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 PPP1R2P9O14990 202 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 IGKV2D-28P01615 120 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 MT1BP07438 61 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 PMCHP20382 165 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 ATP6V0CP27449 155 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 CD164Q04900 197 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 ZNF726P1Q15940 193 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 RNASE13Q5GAN3 156 aaKnown RBP1.06□□□□□ -2.24
PTCH1-223ENST00000551623 C10orf91Q5T1B1 145 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 Q6Q795 121 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 BAGE2Q86Y30 109 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 LINC00469Q8N7U9 141 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 NKAPP1Q8N9T2 125 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 STOML3Q8TAV4 291 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 SEC22CQ9BRL7 303 aa1.06□□□□□ -2.24
PTCH1-223ENST00000551623 HIGD2AQ9BW72 106 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms