RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 CRYGAP11844 174 aa8.68□□□□□ -1.02
TMEM106C-216ENST00000551305 MRPL55Q7Z7F7 128 aaKnown RBP8.68□□□□□ -1.02
TMEM106C-216ENST00000551305 Q8IZM0 81 aa8.68□□□□□ -1.02
TMEM106C-216ENST00000551305 CYSLTR1Q9Y271 337 aa8.68□□□□□ -1.02
TMEM106C-216ENST00000551305 FAT4Q6V0I7 4981 aa8.67□□□□□ -1.02
TMEM106C-216ENST00000551305 RPL37AP8A6NKH3 93 aa8.67□□□□□ -1.02
TMEM106C-216ENST00000551305 BCE1O60756 84 aa8.67□□□□□ -1.02
TMEM106C-216ENST00000551305 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
TMEM106C-216ENST00000551305 MAP1LC3AQ9H492 121 aa8.67□□□□□ -1.02
TMEM106C-216ENST00000551305 IGIPA6NJ69 53 aa8.66□□□□□ -1.02
TMEM106C-216ENST00000551305 Q8N8P6 123 aa8.66□□□□□ -1.02
TMEM106C-216ENST00000551305 LINC00167Q96N53 147 aa8.66□□□□□ -1.02
TMEM106C-216ENST00000551305 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
TMEM106C-216ENST00000551305 CDKN2A-AS1Q9UH64 79 aa8.66□□□□□ -1.02
TMEM106C-216ENST00000551305 LOC100996750A0A140TA64 210 aa8.65□□□□□ -1.02
TMEM106C-216ENST00000551305 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.02
TMEM106C-216ENST00000551305 ATP5L2Q7Z4Y8 100 aa8.65□□□□□ -1.02
TMEM106C-216ENST00000551305 FAM19A3Q7Z5A8 133 aa8.65□□□□□ -1.02
TMEM106C-216ENST00000551305 KRTAP4-6Q9BYQ5 205 aa8.65□□□□□ -1.02
TMEM106C-216ENST00000551305 TP73-AS1Q9UF72 201 aa8.65□□□□□ -1.02
TMEM106C-216ENST00000551305 GAGE10A6NGK3 116 aa8.64□□□□□ -1.03
TMEM106C-216ENST00000551305 F8VRH5 84 aa8.64□□□□□ -1.03
TMEM106C-216ENST00000551305 LAMTOR2Q9Y2Q5 125 aa8.63□□□□□ -1.03
TMEM106C-216ENST00000551305 HERVK_113P63121 156 aa8.62□□□□□ -1.03
TMEM106C-216ENST00000551305 ORMDL2Q53FV1 153 aa8.62□□□□□ -1.03
TMEM106C-216ENST00000551305 A0A1B0GVG6 124 aa8.61□□□□□ -1.03
TMEM106C-216ENST00000551305 GEMIN7Q9H840 131 aaKnown RBP8.61□□□□□ -1.03
TMEM106C-216ENST00000551305 NPSP0C0P6 89 aa8.61□□□□□ -1.03
TMEM106C-216ENST00000551305 SEC11AP67812 179 aa8.6□□□□□ -1.03
TMEM106C-216ENST00000551305 KRTAP13-1Q8IUC0 172 aa8.6□□□□□ -1.03
TMEM106C-216ENST00000551305 KRTAP9-6A0A140TA67 174 aa8.59□□□□□ -1.03
TMEM106C-216ENST00000551305 SCO1O75880 301 aa8.59□□□□□ -1.03
TMEM106C-216ENST00000551305 CXCL5P42830 114 aa8.59□□□□□ -1.03
TMEM106C-216ENST00000551305 UBE2AP49459 152 aa8.59□□□□□ -1.03
TMEM106C-216ENST00000551305 RAB5BP61020 215 aa8.59□□□□□ -1.03
TMEM106C-216ENST00000551305 LINC00304Q8N9R0 145 aa8.59□□□□□ -1.03
TMEM106C-216ENST00000551305 SMIM1B2RUZ4 78 aa8.58□□□□□ -1.04
TMEM106C-216ENST00000551305 COX7B2Q8TF08 81 aa8.58□□□□□ -1.04
TMEM106C-216ENST00000551305 MUC17Q685J3 4493 aa8.57□□□□□ -1.04
TMEM106C-216ENST00000551305 PNRC1Q12796 327 aaPredicted RBP8.57□□□□□ -1.04
TMEM106C-216ENST00000551305 PAPPA-AS1Q5QFB9 102 aa8.57□□□□□ -1.04
TMEM106C-216ENST00000551305 TOMM6Q96B49 74 aa8.57□□□□□ -1.04
TMEM106C-216ENST00000551305 TIMM17AQ99595 171 aa8.57□□□□□ -1.04
TMEM106C-216ENST00000551305 CDIP1Q9H305 208 aa8.57□□□□□ -1.04
TMEM106C-216ENST00000551305 IGLV5-37A0A075B6J1 123 aa8.56□□□□□ -1.04
TMEM106C-216ENST00000551305 K7EMI3 77 aa8.56□□□□□ -1.04
TMEM106C-216ENST00000551305 ADCYAP1P18509 176 aa8.56□□□□□ -1.04
TMEM106C-216ENST00000551305 PDZD11Q5EBL8 140 aa8.56□□□□□ -1.04
TMEM106C-216ENST00000551305 NXT2Q9NPJ8 142 aaKnown RBP8.56□□□□□ -1.04
TMEM106C-216ENST00000551305 IGLV7-46A0A075B6I9 117 aa8.55□□□□□ -1.04
TMEM106C-216ENST00000551305 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
TMEM106C-216ENST00000551305 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
TMEM106C-216ENST00000551305 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
TMEM106C-216ENST00000551305 NKAPP1Q8N9T2 125 aa8.55□□□□□ -1.04
TMEM106C-216ENST00000551305 SPINK8P0C7L1 97 aa8.54□□□□□ -1.04
TMEM106C-216ENST00000551305 PRLHP81277 87 aa8.54□□□□□ -1.04
TMEM106C-216ENST00000551305 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
TMEM106C-216ENST00000551305 KIAA1644Q3SXP7 199 aa8.54□□□□□ -1.04
TMEM106C-216ENST00000551305 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
TMEM106C-216ENST00000551305 IGKV2D-26A0A0A0MRZ7 120 aa8.53□□□□□ -1.04
TMEM106C-216ENST00000551305 TINCRA0A1B0GVN0 87 aa8.53□□□□□ -1.04
TMEM106C-216ENST00000551305 ANAPC16Q96DE5 110 aa8.53□□□□□ -1.04
TMEM106C-216ENST00000551305 IGLV5-45A0A087WSX0 123 aa8.52□□□□□ -1.05
TMEM106C-216ENST00000551305 MT-ND4LP03901 98 aa8.52□□□□□ -1.05
TMEM106C-216ENST00000551305 G0S2P27469 103 aa8.52□□□□□ -1.05
TMEM106C-216ENST00000551305 ERASQ7Z444 233 aa8.52□□□□□ -1.05
TMEM106C-216ENST00000551305 FAM19A1Q7Z5A9 133 aa8.51□□□□□ -1.05
TMEM106C-216ENST00000551305 TMEM238C9JI98 176 aa8.5□□□□□ -1.05
TMEM106C-216ENST00000551305 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
TMEM106C-216ENST00000551305 C3orf22Q8N5N4 141 aa8.5□□□□□ -1.05
TMEM106C-216ENST00000551305 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
TMEM106C-216ENST00000551305 PFN2P35080 140 aa8.49□□□□□ -1.05
TMEM106C-216ENST00000551305 PPDPFQ9H3Y8 114 aa8.49□□□□□ -1.05
TMEM106C-216ENST00000551305 TMEM126AQ9H061 195 aa8.48□□□□□ -1.05
TMEM106C-216ENST00000551305 ATP5LO75964 103 aa8.48□□□□□ -1.05
TMEM106C-216ENST00000551305 VPREB1P12018 145 aa8.48□□□□□ -1.05
TMEM106C-216ENST00000551305 PLEKHB2Q96CS7 222 aa8.48□□□□□ -1.05
TMEM106C-216ENST00000551305 M0R378 163 aa8.47□□□□□ -1.05
TMEM106C-216ENST00000551305 PMVKQ15126 192 aa8.46□□□□□ -1.06
TMEM106C-216ENST00000551305 Q8NDZ9 215 aa8.46□□□□□ -1.06
TMEM106C-216ENST00000551305 SND1-IT1Q9HBX3 110 aa8.46□□□□□ -1.06
TMEM106C-216ENST00000551305 MRPL18Q9H0U6 180 aaKnown RBP8.45□□□□□ -1.06
TMEM106C-216ENST00000551305 LINC01546A6NGU7 62 aa8.44□□□□□ -1.06
TMEM106C-216ENST00000551305 RAB14P61106 215 aa8.44□□□□□ -1.06
TMEM106C-216ENST00000551305 CBLN2Q8IUK8 224 aa8.44□□□□□ -1.06
TMEM106C-216ENST00000551305 H3BRM9 83 aa8.43□□□□□ -1.06
TMEM106C-216ENST00000551305 CTAG1AP78358 180 aa8.43□□□□□ -1.06
TMEM106C-216ENST00000551305 ZNF625Q96I27 306 aaPredicted RBP8.43□□□□□ -1.06
TMEM106C-216ENST00000551305 ERG28Q9UKR5 140 aa8.43□□□□□ -1.06
TMEM106C-216ENST00000551305 RPL24P83731 157 aaKnown RBP8.42□□□□□ -1.06
TMEM106C-216ENST00000551305 HIGD2AQ9BW72 106 aa8.42□□□□□ -1.06
TMEM106C-216ENST00000551305 IGLV5-39A0A0G2JS06 123 aa8.41□□□□□ -1.06
TMEM106C-216ENST00000551305 IGLC3P0DOY3 106 aa8.4□□□□□ -1.06
TMEM106C-216ENST00000551305 NDUFA6P56556 154 aa8.4□□□□□ -1.06
TMEM106C-216ENST00000551305 LINC01549A6NIU2 74 aa8.39□□□□□ -1.07
TMEM106C-216ENST00000551305 ZNF22P17026 224 aaPredicted RBP8.39□□□□□ -1.07
TMEM106C-216ENST00000551305 LCE2CQ5TA81 110 aa8.39□□□□□ -1.07
TMEM106C-216ENST00000551305 SPAG11AQ6PDA7 123 aa8.39□□□□□ -1.07
TMEM106C-216ENST00000551305 DAND5Q8N907 189 aa8.39□□□□□ -1.07
TMEM106C-216ENST00000551305 SPRR4Q96PI1 79 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms