RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 TYMSOSQ8TAI1 123 aa6.73□□□□□ -1.33
SMARCD1-208ENST00000550280 TP73-AS1Q9UF72 201 aa6.73□□□□□ -1.33
SMARCD1-208ENST00000550280 CDKN2A-AS1Q9UH64 79 aa6.73□□□□□ -1.33
SMARCD1-208ENST00000550280 S100A8P05109 93 aa6.72□□□□□ -1.33
SMARCD1-208ENST00000550280 CRYGAP11844 174 aa6.72□□□□□ -1.33
SMARCD1-208ENST00000550280 LINC00167Q96N53 147 aa6.72□□□□□ -1.33
SMARCD1-208ENST00000550280 RPL37AP8A6NKH3 93 aa6.71□□□□□ -1.34
SMARCD1-208ENST00000550280 PRSS2P07478 247 aa6.71□□□□□ -1.34
SMARCD1-208ENST00000550280 CKS1BP61024 79 aa6.71□□□□□ -1.34
SMARCD1-208ENST00000550280 LBHQ53QV2 105 aaPredicted RBP6.71□□□□□ -1.34
SMARCD1-208ENST00000550280 C6orf226Q5I0X4 101 aa6.71□□□□□ -1.34
SMARCD1-208ENST00000550280 ATP5L2Q7Z4Y8 100 aa6.71□□□□□ -1.34
SMARCD1-208ENST00000550280 Q8N8P6 123 aa6.71□□□□□ -1.34
SMARCD1-208ENST00000550280 ALKBH7Q9BT30 221 aaPredicted RBP6.71□□□□□ -1.34
SMARCD1-208ENST00000550280 CYSLTR1Q9Y271 337 aa6.71□□□□□ -1.34
SMARCD1-208ENST00000550280 F8VRH5 84 aa6.7□□□□□ -1.34
SMARCD1-208ENST00000550280 RPL28P46779 137 aaKnown RBP6.7□□□□□ -1.34
SMARCD1-208ENST00000550280 C2orf88Q9BSF0 95 aa6.7□□□□□ -1.34
SMARCD1-208ENST00000550280 VCX2Q9H322 139 aa6.7□□□□□ -1.34
SMARCD1-208ENST00000550280 GAGE10A6NGK3 116 aa6.69□□□□□ -1.34
SMARCD1-208ENST00000550280 SMIM1B2RUZ4 78 aa6.69□□□□□ -1.34
SMARCD1-208ENST00000550280 MAP1LC3AQ9H492 121 aa6.69□□□□□ -1.34
SMARCD1-208ENST00000550280 LAMTOR2Q9Y2Q5 125 aa6.69□□□□□ -1.34
SMARCD1-208ENST00000550280 SCO1O75880 301 aa6.68□□□□□ -1.34
SMARCD1-208ENST00000550280 NPSP0C0P6 89 aa6.68□□□□□ -1.34
SMARCD1-208ENST00000550280 PEA15Q15121 130 aa6.68□□□□□ -1.34
SMARCD1-208ENST00000550280 IGLV5-37A0A075B6J1 123 aa6.67□□□□□ -1.34
SMARCD1-208ENST00000550280 HERVK_113P63121 156 aa6.67□□□□□ -1.34
SMARCD1-208ENST00000550280 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
SMARCD1-208ENST00000550280 ORMDL2Q53FV1 153 aa6.66□□□□□ -1.34
SMARCD1-208ENST00000550280 A0A1B0GVG6 124 aa6.65□□□□□ -1.34
SMARCD1-208ENST00000550280 ADCYAP1P18509 176 aa6.65□□□□□ -1.34
SMARCD1-208ENST00000550280 PNRC1Q12796 327 aaPredicted RBP6.65□□□□□ -1.34
SMARCD1-208ENST00000550280 FAM229BQ4G0N7 80 aa6.65□□□□□ -1.34
SMARCD1-208ENST00000550280 LINC00304Q8N9R0 145 aa6.65□□□□□ -1.34
SMARCD1-208ENST00000550280 TIMM17AQ99595 171 aa6.65□□□□□ -1.34
SMARCD1-208ENST00000550280 IGLV5-45A0A087WSX0 123 aa6.64□□□□□ -1.35
SMARCD1-208ENST00000550280 CXCL5P42830 114 aa6.64□□□□□ -1.35
SMARCD1-208ENST00000550280 Q8NDZ9 215 aa6.64□□□□□ -1.35
SMARCD1-208ENST00000550280 TOMM6Q96B49 74 aa6.64□□□□□ -1.35
SMARCD1-208ENST00000550280 IGLV7-46A0A075B6I9 117 aa6.63□□□□□ -1.35
SMARCD1-208ENST00000550280 IGKV2-28A0A075B6P5 120 aa6.63□□□□□ -1.35
SMARCD1-208ENST00000550280 K7EMI3 77 aa6.63□□□□□ -1.35
SMARCD1-208ENST00000550280 IGKV2D-28P01615 120 aa6.63□□□□□ -1.35
SMARCD1-208ENST00000550280 UBE2AP49459 152 aa6.63□□□□□ -1.35
SMARCD1-208ENST00000550280 SEC11AP67812 179 aa6.63□□□□□ -1.35
SMARCD1-208ENST00000550280 PRLHP81277 87 aa6.63□□□□□ -1.35
SMARCD1-208ENST00000550280 COX7B2Q8TF08 81 aa6.63□□□□□ -1.35
SMARCD1-208ENST00000550280 CDIP1Q9H305 208 aa6.63□□□□□ -1.35
SMARCD1-208ENST00000550280 GEMIN7Q9H840 131 aaKnown RBP6.63□□□□□ -1.35
SMARCD1-208ENST00000550280 RAB5BP61020 215 aa6.62□□□□□ -1.35
SMARCD1-208ENST00000550280 PDZD11Q5EBL8 140 aa6.62□□□□□ -1.35
SMARCD1-208ENST00000550280 C3orf22Q8N5N4 141 aa6.62□□□□□ -1.35
SMARCD1-208ENST00000550280 NXT2Q9NPJ8 142 aaKnown RBP6.62□□□□□ -1.35
SMARCD1-208ENST00000550280 TINCRA0A1B0GVN0 87 aa6.61□□□□□ -1.35
SMARCD1-208ENST00000550280 TMEM238C9JI98 176 aa6.61□□□□□ -1.35
SMARCD1-208ENST00000550280 SPINK8P0C7L1 97 aa6.61□□□□□ -1.35
SMARCD1-208ENST00000550280 VPREB1P12018 145 aa6.61□□□□□ -1.35
SMARCD1-208ENST00000550280 KIAA1644Q3SXP7 199 aa6.61□□□□□ -1.35
SMARCD1-208ENST00000550280 ERASQ7Z444 233 aa6.61□□□□□ -1.35
SMARCD1-208ENST00000550280 KRTAP4-1Q9BYQ7 146 aa6.61□□□□□ -1.35
SMARCD1-208ENST00000550280 M0R378 163 aa6.59□□□□□ -1.35
SMARCD1-208ENST00000550280 PAPPA-AS1Q5QFB9 102 aa6.59□□□□□ -1.35
SMARCD1-208ENST00000550280 NKAPP1Q8N9T2 125 aa6.59□□□□□ -1.35
SMARCD1-208ENST00000550280 PLEKHB2Q96CS7 222 aa6.59□□□□□ -1.35
SMARCD1-208ENST00000550280 SCGB3A1Q96QR1 104 aa6.59□□□□□ -1.35
SMARCD1-208ENST00000550280 TMEM126AQ9H061 195 aa6.59□□□□□ -1.35
SMARCD1-208ENST00000550280 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
SMARCD1-208ENST00000550280 CST9LQ9H4G1 147 aa6.59□□□□□ -1.35
SMARCD1-208ENST00000550280 IGKV2D-26A0A0A0MRZ7 120 aa6.58□□□□□ -1.36
SMARCD1-208ENST00000550280 ANAPC16Q96DE5 110 aa6.58□□□□□ -1.36
SMARCD1-208ENST00000550280 LINC01546A6NGU7 62 aa6.57□□□□□ -1.36
SMARCD1-208ENST00000550280 FAM19A1Q7Z5A9 133 aa6.57□□□□□ -1.36
SMARCD1-208ENST00000550280 IGLV5-39A0A0G2JS06 123 aa6.56□□□□□ -1.36
SMARCD1-208ENST00000550280 MT-ND4LP03901 98 aa6.56□□□□□ -1.36
SMARCD1-208ENST00000550280 PFN2P35080 140 aa6.56□□□□□ -1.36
SMARCD1-208ENST00000550280 CTAG1AP78358 180 aa6.56□□□□□ -1.36
SMARCD1-208ENST00000550280 SND1-IT1Q9HBX3 110 aa6.56□□□□□ -1.36
SMARCD1-208ENST00000550280 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
SMARCD1-208ENST00000550280 G0S2P27469 103 aa6.54□□□□□ -1.36
SMARCD1-208ENST00000550280 A0A096LNJ9 63 aa6.53□□□□□ -1.36
SMARCD1-208ENST00000550280 ATP5LO75964 103 aa6.53□□□□□ -1.36
SMARCD1-208ENST00000550280 IGLC3P0DOY3 106 aa6.53□□□□□ -1.36
SMARCD1-208ENST00000550280 ZNF22P17026 224 aaPredicted RBP6.53□□□□□ -1.36
SMARCD1-208ENST00000550280 PMVKQ15126 192 aa6.53□□□□□ -1.36
SMARCD1-208ENST00000550280 ASB16-AS1Q495Z4 193 aa6.53□□□□□ -1.36
SMARCD1-208ENST00000550280 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
SMARCD1-208ENST00000550280 ERG28Q9UKR5 140 aa6.53□□□□□ -1.36
SMARCD1-208ENST00000550280 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
SMARCD1-208ENST00000550280 CBLN2Q8IUK8 224 aa6.52□□□□□ -1.37
SMARCD1-208ENST00000550280 ZNF625Q96I27 306 aaPredicted RBP6.52□□□□□ -1.37
SMARCD1-208ENST00000550280 HIGD2AQ9BW72 106 aa6.52□□□□□ -1.37
SMARCD1-208ENST00000550280 MRPL18Q9H0U6 180 aaKnown RBP6.52□□□□□ -1.37
SMARCD1-208ENST00000550280 RAB14P61106 215 aa6.51□□□□□ -1.37
SMARCD1-208ENST00000550280 FP248Q71RG6 208 aaPredicted RBP6.51□□□□□ -1.37
SMARCD1-208ENST00000550280 DAND5Q8N907 189 aa6.51□□□□□ -1.37
SMARCD1-208ENST00000550280 URB1-AS1Q96HZ7 61 aa6.5□□□□□ -1.37
SMARCD1-208ENST00000550280 H3BRM9 83 aa6.49□□□□□ -1.37
SMARCD1-208ENST00000550280 LCE2CQ5TA81 110 aa6.49□□□□□ -1.37
SMARCD1-208ENST00000550280 SPAG11AQ6PDA7 123 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms