RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 PRSS47A8MTI9 375 aa5.76□□□□□ -1.49
TRAFD1-207ENST00000550051 BCE1O60756 84 aa5.76□□□□□ -1.49
TRAFD1-207ENST00000550051 S100A8P05109 93 aa5.76□□□□□ -1.49
TRAFD1-207ENST00000550051 CKS1BP61024 79 aa5.76□□□□□ -1.49
TRAFD1-207ENST00000550051 CTAG1AP78358 180 aa5.76□□□□□ -1.49
TRAFD1-207ENST00000550051 C6orf226Q5I0X4 101 aa5.76□□□□□ -1.49
TRAFD1-207ENST00000550051 Q6ZN92 141 aa5.76□□□□□ -1.49
TRAFD1-207ENST00000550051 A0A1B0GXF2 115 aa5.75□□□□□ -1.49
TRAFD1-207ENST00000550051 PRSS2P07478 247 aa5.75□□□□□ -1.49
TRAFD1-207ENST00000550051 TEX43Q6ZNM6 134 aa5.75□□□□□ -1.49
TRAFD1-207ENST00000550051 FAM19A3Q7Z5A8 133 aa5.75□□□□□ -1.49
TRAFD1-207ENST00000550051 Q8IZM0 81 aa5.75□□□□□ -1.49
TRAFD1-207ENST00000550051 NPSP0C0P6 89 aa5.74□□□□□ -1.49
TRAFD1-207ENST00000550051 TMEM136Q6ZRR5 245 aa5.74□□□□□ -1.49
TRAFD1-207ENST00000550051 MRPL55Q7Z7F7 128 aaKnown RBP5.74□□□□□ -1.49
TRAFD1-207ENST00000550051 ORMDL3Q8N138 153 aa5.74□□□□□ -1.49
TRAFD1-207ENST00000550051 LINC00469Q8N7U9 141 aa5.74□□□□□ -1.49
TRAFD1-207ENST00000550051 AMELXQ99217 191 aa5.74□□□□□ -1.49
TRAFD1-207ENST00000550051 C2orf88Q9BSF0 95 aa5.74□□□□□ -1.49
TRAFD1-207ENST00000550051 XAGE1AQ9HD64 81 aa5.74□□□□□ -1.49
TRAFD1-207ENST00000550051 NAT8Q9UHE5 227 aa5.74□□□□□ -1.49
TRAFD1-207ENST00000550051 ADIRFQ15847 76 aa5.73□□□□□ -1.49
TRAFD1-207ENST00000550051 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
TRAFD1-207ENST00000550051 KRTAP13-2Q52LG2 175 aa5.73□□□□□ -1.49
TRAFD1-207ENST00000550051 C2orf66Q6UXQ4 117 aa5.73□□□□□ -1.49
TRAFD1-207ENST00000550051 ALKBH7Q9BT30 221 aaPredicted RBP5.73□□□□□ -1.49
TRAFD1-207ENST00000550051 VCX2Q9H322 139 aa5.73□□□□□ -1.49
TRAFD1-207ENST00000550051 FAT4Q6V0I7 4981 aa5.73□□□□□ -1.49
TRAFD1-207ENST00000550051 F8VRH5 84 aa5.72□□□□□ -1.49
TRAFD1-207ENST00000550051 FAM229BQ4G0N7 80 aa5.72□□□□□ -1.49
TRAFD1-207ENST00000550051 MRPL54Q6P161 138 aaKnown RBP5.72□□□□□ -1.49
TRAFD1-207ENST00000550051 LINC00173Q6ZV60 143 aa5.72□□□□□ -1.49
TRAFD1-207ENST00000550051 PRELID3AQ96N28 172 aa5.72□□□□□ -1.49
TRAFD1-207ENST00000550051 LINC00167Q96N53 147 aa5.72□□□□□ -1.49
TRAFD1-207ENST00000550051 TOMM7Q9P0U1 55 aa5.72□□□□□ -1.49
TRAFD1-207ENST00000550051 LAMTOR2Q9Y2Q5 125 aa5.72□□□□□ -1.49
TRAFD1-207ENST00000550051 IGIPA6NJ69 53 aa5.71□□□□□ -1.5
TRAFD1-207ENST00000550051 C9JQL5 133 aa5.71□□□□□ -1.5
TRAFD1-207ENST00000550051 SEC11AP67812 179 aa5.71□□□□□ -1.5
TRAFD1-207ENST00000550051 ZC2HC1BQ5TFG8 222 aa5.71□□□□□ -1.5
TRAFD1-207ENST00000550051 KRTAP13-1Q8IUC0 172 aa5.71□□□□□ -1.5
TRAFD1-207ENST00000550051 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
TRAFD1-207ENST00000550051 CYSLTR1Q9Y271 337 aa5.71□□□□□ -1.5
TRAFD1-207ENST00000550051 B5MCH6 92 aa5.7□□□□□ -1.5
TRAFD1-207ENST00000550051 K7EMI3 77 aa5.7□□□□□ -1.5
TRAFD1-207ENST00000550051 HERVK_113P63121 156 aa5.7□□□□□ -1.5
TRAFD1-207ENST00000550051 ATP5L2Q7Z4Y8 100 aa5.7□□□□□ -1.5
TRAFD1-207ENST00000550051 Q8N8P6 123 aa5.7□□□□□ -1.5
TRAFD1-207ENST00000550051 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
TRAFD1-207ENST00000550051 CDKN2A-AS1Q9UH64 79 aa5.7□□□□□ -1.5
TRAFD1-207ENST00000550051 IGLV7-46A0A075B6I9 117 aa5.69□□□□□ -1.5
TRAFD1-207ENST00000550051 IGLV5-37A0A075B6J1 123 aa5.69□□□□□ -1.5
TRAFD1-207ENST00000550051 LOC389332A0A1B0GUA5 103 aa5.69□□□□□ -1.5
TRAFD1-207ENST00000550051 RPL37AP8A6NKH3 93 aa5.69□□□□□ -1.5
TRAFD1-207ENST00000550051 CXCL5P42830 114 aa5.69□□□□□ -1.5
TRAFD1-207ENST00000550051 AKAP14Q86UN6 197 aa5.69□□□□□ -1.5
TRAFD1-207ENST00000550051 RETNLBQ9BQ08 111 aa5.69□□□□□ -1.5
TRAFD1-207ENST00000550051 MAP1LC3AQ9H492 121 aa5.69□□□□□ -1.5
TRAFD1-207ENST00000550051 PEA15Q15121 130 aa5.68□□□□□ -1.5
TRAFD1-207ENST00000550051 ORMDL2Q53FV1 153 aa5.68□□□□□ -1.5
TRAFD1-207ENST00000550051 PAPPA-AS1Q5QFB9 102 aa5.68□□□□□ -1.5
TRAFD1-207ENST00000550051 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
TRAFD1-207ENST00000550051 IGKV2D-26A0A0A0MRZ7 120 aa5.67□□□□□ -1.5
TRAFD1-207ENST00000550051 G0S2P27469 103 aa5.67□□□□□ -1.5
TRAFD1-207ENST00000550051 GEMIN7Q9H840 131 aaKnown RBP5.67□□□□□ -1.5
TRAFD1-207ENST00000550051 GAGE10A6NGK3 116 aa5.66□□□□□ -1.5
TRAFD1-207ENST00000550051 UBE2AP49459 152 aa5.66□□□□□ -1.5
TRAFD1-207ENST00000550051 PDZD11Q5EBL8 140 aa5.66□□□□□ -1.5
TRAFD1-207ENST00000550051 SMIM1B2RUZ4 78 aa5.65□□□□□ -1.5
TRAFD1-207ENST00000550051 PNRC1Q12796 327 aaPredicted RBP5.65□□□□□ -1.5
TRAFD1-207ENST00000550051 TIMM17AQ99595 171 aa5.65□□□□□ -1.5
TRAFD1-207ENST00000550051 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.5
TRAFD1-207ENST00000550051 PPDPFQ9H3Y8 114 aa5.65□□□□□ -1.5
TRAFD1-207ENST00000550051 SPAG11AQ6PDA7 123 aa5.64□□□□□ -1.51
TRAFD1-207ENST00000550051 NKAPP1Q8N9T2 125 aa5.64□□□□□ -1.51
TRAFD1-207ENST00000550051 COX7B2Q8TF08 81 aa5.64□□□□□ -1.51
TRAFD1-207ENST00000550051 NXT2Q9NPJ8 142 aaKnown RBP5.64□□□□□ -1.51
TRAFD1-207ENST00000550051 IGLV5-45A0A087WSX0 123 aa5.63□□□□□ -1.51
TRAFD1-207ENST00000550051 TINCRA0A1B0GVN0 87 aa5.63□□□□□ -1.51
TRAFD1-207ENST00000550051 ERASQ7Z444 233 aa5.63□□□□□ -1.51
TRAFD1-207ENST00000550051 TOMM6Q96B49 74 aa5.63□□□□□ -1.51
TRAFD1-207ENST00000550051 PLEKHB2Q96CS7 222 aa5.63□□□□□ -1.51
TRAFD1-207ENST00000550051 RAB5BP61020 215 aa5.62□□□□□ -1.51
TRAFD1-207ENST00000550051 FP248Q71RG6 208 aaPredicted RBP5.62□□□□□ -1.51
TRAFD1-207ENST00000550051 GNB1LQ9BYB4 327 aa5.62□□□□□ -1.51
TRAFD1-207ENST00000550051 IGKV2-28A0A075B6P5 120 aa5.61□□□□□ -1.51
TRAFD1-207ENST00000550051 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
TRAFD1-207ENST00000550051 IGKV2D-28P01615 120 aa5.61□□□□□ -1.51
TRAFD1-207ENST00000550051 ASB16-AS1Q495Z4 193 aa5.61□□□□□ -1.51
TRAFD1-207ENST00000550051 LINC01549A6NIU2 74 aa5.6□□□□□ -1.51
TRAFD1-207ENST00000550051 LINC01547P58512 204 aaPredicted RBP5.6□□□□□ -1.51
TRAFD1-207ENST00000550051 PRLHP81277 87 aa5.6□□□□□ -1.51
TRAFD1-207ENST00000550051 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
TRAFD1-207ENST00000550051 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
TRAFD1-207ENST00000550051 TMEM126AQ9H061 195 aa5.6□□□□□ -1.51
TRAFD1-207ENST00000550051 M0R378 163 aa5.59□□□□□ -1.51
TRAFD1-207ENST00000550051 SCO1O75880 301 aa5.59□□□□□ -1.51
TRAFD1-207ENST00000550051 ATP5LO75964 103 aa5.59□□□□□ -1.51
TRAFD1-207ENST00000550051 MT-ND4LP03901 98 aa5.59□□□□□ -1.51
TRAFD1-207ENST00000550051 VPREB1P12018 145 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms