RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 IGIPA6NJ69 53 aa9.05□□□□□ -0.96
RAB5C-205ENST00000550013 BCE1O60756 84 aa9.05□□□□□ -0.96
RAB5C-205ENST00000550013 RPL28P46779 137 aaKnown RBP9.05□□□□□ -0.96
RAB5C-205ENST00000550013 TYMSOSQ8TAI1 123 aa9.05□□□□□ -0.96
RAB5C-205ENST00000550013 CDKN2A-AS1Q9UH64 79 aa9.05□□□□□ -0.96
RAB5C-205ENST00000550013 LAMTOR2Q9Y2Q5 125 aa9.05□□□□□ -0.96
RAB5C-205ENST00000550013 F8VRH5 84 aa9.04□□□□□ -0.96
RAB5C-205ENST00000550013 FAM19A3Q7Z5A8 133 aa9.04□□□□□ -0.96
RAB5C-205ENST00000550013 ANAPC11Q9NYG5 84 aa9.04□□□□□ -0.96
RAB5C-205ENST00000550013 TP73-AS1Q9UF72 201 aa9.04□□□□□ -0.96
RAB5C-205ENST00000550013 RPL37AP8A6NKH3 93 aa9.03□□□□□ -0.96
RAB5C-205ENST00000550013 CRYGAP11844 174 aa9.03□□□□□ -0.96
RAB5C-205ENST00000550013 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.97
RAB5C-205ENST00000550013 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
RAB5C-205ENST00000550013 LINC00167Q96N53 147 aa9.02□□□□□ -0.97
RAB5C-205ENST00000550013 GAGE10A6NGK3 116 aa9.01□□□□□ -0.97
RAB5C-205ENST00000550013 NPSP0C0P6 89 aa9.01□□□□□ -0.97
RAB5C-205ENST00000550013 HERVK_113P63121 156 aa9.01□□□□□ -0.97
RAB5C-205ENST00000550013 KRTAP13-2Q52LG2 175 aa9.01□□□□□ -0.97
RAB5C-205ENST00000550013 RETNLBQ9BQ08 111 aa9.01□□□□□ -0.97
RAB5C-205ENST00000550013 GEMIN7Q9H840 131 aaKnown RBP9.01□□□□□ -0.97
RAB5C-205ENST00000550013 MUC17Q685J3 4493 aa9□□□□□ -0.97
RAB5C-205ENST00000550013 SEC11AP67812 179 aa8.99□□□□□ -0.97
RAB5C-205ENST00000550013 SMIM1B2RUZ4 78 aa8.98□□□□□ -0.97
RAB5C-205ENST00000550013 CXCL5P42830 114 aa8.98□□□□□ -0.97
RAB5C-205ENST00000550013 KRTAP13-1Q8IUC0 172 aa8.98□□□□□ -0.97
RAB5C-205ENST00000550013 A0A1B0GVG6 124 aa8.97□□□□□ -0.97
RAB5C-205ENST00000550013 K7EMI3 77 aa8.97□□□□□ -0.97
RAB5C-205ENST00000550013 PAPPA-AS1Q5QFB9 102 aa8.97□□□□□ -0.97
RAB5C-205ENST00000550013 TIMM17AQ99595 171 aa8.97□□□□□ -0.97
RAB5C-205ENST00000550013 NXT2Q9NPJ8 142 aaKnown RBP8.97□□□□□ -0.97
RAB5C-205ENST00000550013 UBE2AP49459 152 aa8.96□□□□□ -0.98
RAB5C-205ENST00000550013 COX7B2Q8TF08 81 aa8.96□□□□□ -0.98
RAB5C-205ENST00000550013 TOMM6Q96B49 74 aa8.96□□□□□ -0.98
RAB5C-205ENST00000550013 IGLV5-37A0A075B6J1 123 aa8.95□□□□□ -0.98
RAB5C-205ENST00000550013 SCO1O75880 301 aa8.95□□□□□ -0.98
RAB5C-205ENST00000550013 RAB5BP61020 215 aa8.94□□□□□ -0.98
RAB5C-205ENST00000550013 PNRC1Q12796 327 aaPredicted RBP8.94□□□□□ -0.98
RAB5C-205ENST00000550013 PDZD11Q5EBL8 140 aa8.94□□□□□ -0.98
RAB5C-205ENST00000550013 LINC00304Q8N9R0 145 aa8.94□□□□□ -0.98
RAB5C-205ENST00000550013 MT-ND4LP03901 98 aa8.93□□□□□ -0.98
RAB5C-205ENST00000550013 ADCYAP1P18509 176 aa8.93□□□□□ -0.98
RAB5C-205ENST00000550013 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
RAB5C-205ENST00000550013 NKAPP1Q8N9T2 125 aa8.93□□□□□ -0.98
RAB5C-205ENST00000550013 ANAPC16Q96DE5 110 aa8.93□□□□□ -0.98
RAB5C-205ENST00000550013 SCGB3A1Q96QR1 104 aa8.93□□□□□ -0.98
RAB5C-205ENST00000550013 IGKV2-28A0A075B6P5 120 aa8.92□□□□□ -0.98
RAB5C-205ENST00000550013 IGLV5-45A0A087WSX0 123 aa8.92□□□□□ -0.98
RAB5C-205ENST00000550013 TINCRA0A1B0GVN0 87 aa8.92□□□□□ -0.98
RAB5C-205ENST00000550013 IGKV2D-28P01615 120 aa8.92□□□□□ -0.98
RAB5C-205ENST00000550013 SPINK8P0C7L1 97 aa8.92□□□□□ -0.98
RAB5C-205ENST00000550013 G0S2P27469 103 aa8.92□□□□□ -0.98
RAB5C-205ENST00000550013 KIAA1644Q3SXP7 199 aa8.92□□□□□ -0.98
RAB5C-205ENST00000550013 ERASQ7Z444 233 aa8.92□□□□□ -0.98
RAB5C-205ENST00000550013 CDIP1Q9H305 208 aa8.91□□□□□ -0.98
RAB5C-205ENST00000550013 TPRXLQ17RH7 258 aa8.9□□□□□ -0.98
RAB5C-205ENST00000550013 IGLV7-46A0A075B6I9 117 aa8.89□□□□□ -0.99
RAB5C-205ENST00000550013 IGKV2D-26A0A0A0MRZ7 120 aa8.89□□□□□ -0.99
RAB5C-205ENST00000550013 PRLHP81277 87 aa8.89□□□□□ -0.99
RAB5C-205ENST00000550013 CST9LQ9H4G1 147 aa8.89□□□□□ -0.99
RAB5C-205ENST00000550013 KRTAP9-6A0A140TA67 174 aa8.88□□□□□ -0.99
RAB5C-205ENST00000550013 TMEM238C9JI98 176 aa8.87□□□□□ -0.99
RAB5C-205ENST00000550013 ATP5LO75964 103 aa8.86□□□□□ -0.99
RAB5C-205ENST00000550013 PFN2P35080 140 aa8.86□□□□□ -0.99
RAB5C-205ENST00000550013 FAM19A1Q7Z5A9 133 aa8.86□□□□□ -0.99
RAB5C-205ENST00000550013 TMEM126AQ9H061 195 aa8.86□□□□□ -0.99
RAB5C-205ENST00000550013 VPREB1P12018 145 aa8.85□□□□□ -0.99
RAB5C-205ENST00000550013 C3orf22Q8N5N4 141 aa8.85□□□□□ -0.99
RAB5C-205ENST00000550013 PMVKQ15126 192 aa8.84□□□□□ -0.99
RAB5C-205ENST00000550013 SND1-IT1Q9HBX3 110 aa8.84□□□□□ -0.99
RAB5C-205ENST00000550013 LINC01546A6NGU7 62 aa8.83□□□□□ -1
RAB5C-205ENST00000550013 H3BRM9 83 aa8.83□□□□□ -1
RAB5C-205ENST00000550013 M0R378 163 aa8.83□□□□□ -1
RAB5C-205ENST00000550013 Q8NDZ9 215 aa8.83□□□□□ -1
RAB5C-205ENST00000550013 PLEKHB2Q96CS7 222 aa8.83□□□□□ -1
RAB5C-205ENST00000550013 MRPL18Q9H0U6 180 aaKnown RBP8.83□□□□□ -1
RAB5C-205ENST00000550013 PPDPFQ9H3Y8 114 aa8.83□□□□□ -1
RAB5C-205ENST00000550013 IGLV5-39A0A0G2JS06 123 aa8.81□□□□□ -1
RAB5C-205ENST00000550013 LINC01549A6NIU2 74 aa8.81□□□□□ -1
RAB5C-205ENST00000550013 CTAG1AP78358 180 aa8.81□□□□□ -1
RAB5C-205ENST00000550013 CBLN2Q8IUK8 224 aa8.81□□□□□ -1
RAB5C-205ENST00000550013 ERG28Q9UKR5 140 aa8.81□□□□□ -1
RAB5C-205ENST00000550013 IGLC3P0DOY3 106 aa8.8□□□□□ -1
RAB5C-205ENST00000550013 RAB14P61106 215 aa8.8□□□□□ -1
RAB5C-205ENST00000550013 ZNF22P17026 224 aaPredicted RBP8.79□□□□□ -1
RAB5C-205ENST00000550013 ZNF625Q96I27 306 aaPredicted RBP8.79□□□□□ -1
RAB5C-205ENST00000550013 HIGD2AQ9BW72 106 aa8.79□□□□□ -1
RAB5C-205ENST00000550013 RPL24P83731 157 aaKnown RBP8.78□□□□□ -1
RAB5C-205ENST00000550013 FA2HQ7L5A8 372 aa8.78□□□□□ -1
RAB5C-205ENST00000550013 TRAV9-1A0A075B6T8 112 aa8.77□□□□□ -1.01
RAB5C-205ENST00000550013 NDUFA6P56556 154 aa8.77□□□□□ -1.01
RAB5C-205ENST00000550013 GNB1LQ9BYB4 327 aa8.77□□□□□ -1.01
RAB5C-205ENST00000550013 SMCO4Q9NRQ5 59 aa8.77□□□□□ -1.01
RAB5C-205ENST00000550013 COX17Q14061 63 aa8.76□□□□□ -1.01
RAB5C-205ENST00000550013 SPRR4Q96PI1 79 aa8.76□□□□□ -1.01
RAB5C-205ENST00000550013 SPAG11AQ6PDA7 123 aa8.75□□□□□ -1.01
RAB5C-205ENST00000550013 A0A096LNJ9 63 aa8.74□□□□□ -1.01
RAB5C-205ENST00000550013 FABP9Q0Z7S8 132 aa8.73□□□□□ -1.01
RAB5C-205ENST00000550013 FP248Q71RG6 208 aaPredicted RBP8.73□□□□□ -1.01
RAB5C-205ENST00000550013 DAND5Q8N907 189 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms