RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 A0A096LNJ9 63 aa4.2□□□□□ -1.74
UBE2N-204ENST00000549833 TRAV13-1A0A0B4J241 112 aa4.2□□□□□ -1.74
UBE2N-204ENST00000549833 TRAV8-4A0A0B4J246 113 aa4.2□□□□□ -1.74
UBE2N-204ENST00000549833 IGIPA6NJ69 53 aa4.2□□□□□ -1.74
UBE2N-204ENST00000549833 FUSP35637 526 aaKnown RBP eCLIP4.2□□□□□ -1.74
UBE2N-204ENST00000549833 MRPS36P82909 103 aaKnown RBP4.2□□□□□ -1.74
UBE2N-204ENST00000549833 LINC00173Q6ZV60 143 aa4.2□□□□□ -1.74
UBE2N-204ENST00000549833 BAGE3Q86Y29 109 aa4.2□□□□□ -1.74
UBE2N-204ENST00000549833 TMEM141Q96I45 108 aa4.2□□□□□ -1.74
UBE2N-204ENST00000549833 SCGB3A1Q96QR1 104 aa4.2□□□□□ -1.74
UBE2N-204ENST00000549833 CCL25O15444 150 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 NUPR1O60356 82 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST1H2BKO60814 126 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 SERF1AO75920 110 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST1H2BJP06899 126 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST1H2BOP23527 126 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 G0S2P27469 103 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST1H2BBP33778 126 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 XCL1P47992 114 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST1H2BDP58876 126 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 RAB5BP61020 215 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST1H2BCP62807 126 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 SS18Q15532 418 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST2H2BEQ16778 126 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.19□□□□□ -1.74
UBE2N-204ENST00000549833 SPATA12Q7Z6I5 190 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST1H2BHQ93079 126 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST1H2BNQ99877 126 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 HIST1H2BMQ99879 126 aa4.19□□□□□ -1.74
UBE2N-204ENST00000549833 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
UBE2N-204ENST00000549833 HBDP02042 147 aa4.18□□□□□ -1.74
UBE2N-204ENST00000549833 PDZD11Q5EBL8 140 aa4.18□□□□□ -1.74
UBE2N-204ENST00000549833 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
UBE2N-204ENST00000549833 TEX43Q6ZNM6 134 aa4.18□□□□□ -1.74
UBE2N-204ENST00000549833 FAM19A2Q8N3H0 131 aa4.18□□□□□ -1.74
UBE2N-204ENST00000549833 CHCHD1Q96BP2 118 aaKnown RBP4.18□□□□□ -1.74
UBE2N-204ENST00000549833 AMELXQ99217 191 aa4.18□□□□□ -1.74
UBE2N-204ENST00000549833 TIMM17AQ99595 171 aa4.18□□□□□ -1.74
UBE2N-204ENST00000549833 DNAH5Q8TE73 4624 aa4.18□□□□□ -1.74
UBE2N-204ENST00000549833 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
UBE2N-204ENST00000549833 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.17□□□□□ -1.74
UBE2N-204ENST00000549833 C1orf196B1AJZ1 125 aa4.17□□□□□ -1.74
UBE2N-204ENST00000549833 HSBP1O75506 76 aa4.17□□□□□ -1.74
UBE2N-204ENST00000549833 UBE2D1P51668 147 aa4.17□□□□□ -1.74
UBE2N-204ENST00000549833 COX6A2Q02221 97 aa4.17□□□□□ -1.74
UBE2N-204ENST00000549833 Q6ZN92 141 aa4.17□□□□□ -1.74
UBE2N-204ENST00000549833 C5orf38Q86SI9 138 aa4.17□□□□□ -1.74
UBE2N-204ENST00000549833 Q8N814 137 aa4.17□□□□□ -1.74
UBE2N-204ENST00000549833 C2orf88Q9BSF0 95 aa4.17□□□□□ -1.74
UBE2N-204ENST00000549833 LINC01549A6NIU2 74 aa4.16□□□□□ -1.74
UBE2N-204ENST00000549833 RPL37AP8A6NKH3 93 aa4.16□□□□□ -1.74
UBE2N-204ENST00000549833 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.16□□□□□ -1.74
UBE2N-204ENST00000549833 NDUFA6P56556 154 aa4.16□□□□□ -1.74
UBE2N-204ENST00000549833 HIGD2BQ4VC39 106 aa4.16□□□□□ -1.74
UBE2N-204ENST00000549833 REG3GQ6UW15 175 aa4.16□□□□□ -1.74
UBE2N-204ENST00000549833 C15orf56Q8N910 161 aa4.16□□□□□ -1.74
UBE2N-204ENST00000549833 CST9LQ9H4G1 147 aa4.16□□□□□ -1.74
UBE2N-204ENST00000549833 A0A0J9YXV3 536 aa4.15□□□□□ -1.75
UBE2N-204ENST00000549833 EPM2AB3EWF7 344 aa4.15□□□□□ -1.75
UBE2N-204ENST00000549833 COX7A2LO14548 114 aa4.15□□□□□ -1.75
UBE2N-204ENST00000549833 ATP5LO75964 103 aa4.15□□□□□ -1.75
UBE2N-204ENST00000549833 PMVKQ15126 192 aa4.15□□□□□ -1.75
UBE2N-204ENST00000549833 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.75
UBE2N-204ENST00000549833 LINC01561Q8N1V8 128 aa4.15□□□□□ -1.75
UBE2N-204ENST00000549833 IFI27L1Q96BM0 104 aa4.15□□□□□ -1.75
UBE2N-204ENST00000549833 LINC00526Q96FQ7 95 aa4.15□□□□□ -1.75
UBE2N-204ENST00000549833 DYNC1H1Q14204 4646 aaKnown RBP4.15□□□□□ -1.75
UBE2N-204ENST00000549833 IGHV3OR16-9A0A0B4J2B5 98 aa4.14□□□□□ -1.75
UBE2N-204ENST00000549833 IGHV1-58A0A0C4DH39 117 aa4.14□□□□□ -1.75
UBE2N-204ENST00000549833 C16orf90A8MZG2 172 aa4.14□□□□□ -1.75
UBE2N-204ENST00000549833 FABP4P15090 132 aa4.14□□□□□ -1.75
UBE2N-204ENST00000549833 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
UBE2N-204ENST00000549833 FAM19A3Q7Z5A8 133 aa4.14□□□□□ -1.75
UBE2N-204ENST00000549833 IGLV4-69A0A075B6H9 119 aa4.13□□□□□ -1.75
UBE2N-204ENST00000549833 GVQW2A0A096LPI5 108 aaPredicted RBP4.13□□□□□ -1.75
UBE2N-204ENST00000549833 TINCRA0A1B0GVN0 87 aa4.13□□□□□ -1.75
UBE2N-204ENST00000549833 H0Y8G0 127 aa4.13□□□□□ -1.75
UBE2N-204ENST00000549833 LEPROTL1O95214 131 aa4.13□□□□□ -1.75
UBE2N-204ENST00000549833 IGLC3P0DOY3 106 aa4.13□□□□□ -1.75
UBE2N-204ENST00000549833 COA6Q5JTJ3 125 aaKnown RBP4.13□□□□□ -1.75
UBE2N-204ENST00000549833 ORAOV1Q8WV07 137 aa4.13□□□□□ -1.75
UBE2N-204ENST00000549833 GEMIN7Q9H840 131 aaKnown RBP4.13□□□□□ -1.75
UBE2N-204ENST00000549833 CDKN2A-AS1Q9UH64 79 aa4.13□□□□□ -1.75
UBE2N-204ENST00000549833 LRP1BQ9NZR2 4599 aa4.13□□□□□ -1.75
UBE2N-204ENST00000549833 IGHV3-64A0A075B6Q5 118 aa4.12□□□□□ -1.75
UBE2N-204ENST00000549833 C11orf86A6NJI1 115 aa4.12□□□□□ -1.75
UBE2N-204ENST00000549833 PCP4L1A6NKN8 68 aa4.12□□□□□ -1.75
UBE2N-204ENST00000549833 KRTAP10-1P60331 282 aa4.12□□□□□ -1.75
UBE2N-204ENST00000549833 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
UBE2N-204ENST00000549833 HERVK_113P63121 156 aa4.12□□□□□ -1.75
UBE2N-204ENST00000549833 SPAG11BQ08648 103 aa4.12□□□□□ -1.75
UBE2N-204ENST00000549833 LINC00469Q8N7U9 141 aa4.12□□□□□ -1.75
UBE2N-204ENST00000549833 CHAC1Q9BUX1 264 aa4.12□□□□□ -1.75
UBE2N-204ENST00000549833 HSPB8Q9UJY1 196 aa4.12□□□□□ -1.75
UBE2N-204ENST00000549833 CHTOPQ9Y3Y2 248 aaKnown RBP4.12□□□□□ -1.75
UBE2N-204ENST00000549833 DNAH8Q96JB1 4490 aa4.11□□□□□ -1.75
UBE2N-204ENST00000549833 TRAV12-1A0A0B4J245 112 aa4.11□□□□□ -1.75
UBE2N-204ENST00000549833 APOMO95445 188 aa4.11□□□□□ -1.75
UBE2N-204ENST00000549833 SPINK8P0C7L1 97 aa4.11□□□□□ -1.75
UBE2N-204ENST00000549833 ZNF22P17026 224 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms