RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 ETDBQ3ZM63 59 aa0.95□□□□□ -2.26
PRIM1-204ENST00000549549 Q5VSD8 79 aa0.95□□□□□ -2.26
PRIM1-204ENST00000549549 DEFB107AQ8IZN7 70 aa0.95□□□□□ -2.26
PRIM1-204ENST00000549549 C20orf78Q9BR46 151 aa0.95□□□□□ -2.26
PRIM1-204ENST00000549549 Q9H521 79 aa0.95□□□□□ -2.26
PRIM1-204ENST00000549549 CEP162Q5TB80 1403 aa0.95□□□□□ -2.26
PRIM1-204ENST00000549549 SETBP1Q9Y6X0 1596 aa0.95□□□□□ -2.26
PRIM1-204ENST00000549549 ZNF720Q7Z2F6 126 aa0.94□□□□□ -2.26
PRIM1-204ENST00000549549 SPTBN2O15020 2390 aa0.94□□□□□ -2.26
PRIM1-204ENST00000549549 C6orf201Q7Z4U5 140 aa0.93□□□□□ -2.26
PRIM1-204ENST00000549549 HIGD1BQ9P298 99 aa0.93□□□□□ -2.26
PRIM1-204ENST00000549549 C2CD3Q4AC94 2353 aa0.92□□□□□ -2.26
PRIM1-204ENST00000549549 A0A1B0GU69 56 aa0.91□□□□□ -2.26
PRIM1-204ENST00000549549 F8WEM9 126 aa0.91□□□□□ -2.26
PRIM1-204ENST00000549549 PSENENQ9NZ42 101 aa0.91□□□□□ -2.26
PRIM1-204ENST00000549549 PPRC1Q5VV67 1664 aaKnown RBP0.91□□□□□ -2.26
PRIM1-204ENST00000549549 EDC4Q6P2E9 1401 aaKnown RBP0.9□□□□□ -2.26
PRIM1-204ENST00000549549 CFDP00746 253 aaPredicted RBP0.9□□□□□ -2.27
PRIM1-204ENST00000549549 KIAA0556O60303 1618 aa0.89□□□□□ -2.27
PRIM1-204ENST00000549549 COX6B1P14854 86 aa0.88□□□□□ -2.27
PRIM1-204ENST00000549549 MYO3AQ8NEV4 1616 aa0.88□□□□□ -2.27
PRIM1-204ENST00000549549 CUX1P39880 1505 aa0.88□□□□□ -2.27
PRIM1-204ENST00000549549 SYNE1Q8NF91 8797 aaKnown RBP0.87□□□□□ -2.27
PRIM1-204ENST00000549549 U3KQA8 63 aa0.87□□□□□ -2.27
PRIM1-204ENST00000549549 ABCC3O15438 1527 aa0.87□□□□□ -2.27
PRIM1-204ENST00000549549 ZNF292O60281 2723 aa0.86□□□□□ -2.27
PRIM1-204ENST00000549549 K7EQZ3 153 aa0.86□□□□□ -2.27
PRIM1-204ENST00000549549 ZFYVE26Q68DK2 2539 aa0.86□□□□□ -2.27
PRIM1-204ENST00000549549 NAV2Q8IVL1 2488 aa0.86□□□□□ -2.27
PRIM1-204ENST00000549549 OTOGQ6ZRI0 2925 aa0.85□□□□□ -2.27
PRIM1-204ENST00000549549 GNGT1P63211 74 aa0.85□□□□□ -2.27
PRIM1-204ENST00000549549 KIAA1551Q9HCM1 1747 aa0.85□□□□□ -2.27
PRIM1-204ENST00000549549 LRP1Q07954 4544 aaKnown RBP0.84□□□□□ -2.27
PRIM1-204ENST00000549549 SPRR1AP35321 89 aa0.84□□□□□ -2.27
PRIM1-204ENST00000549549 ALKAL2Q6UX46 152 aa0.84□□□□□ -2.27
PRIM1-204ENST00000549549 C5P01031 1676 aa0.84□□□□□ -2.28
PRIM1-204ENST00000549549 PLCE1Q9P212 2302 aa0.83□□□□□ -2.28
PRIM1-204ENST00000549549 GNG2P59768 71 aa0.83□□□□□ -2.28
PRIM1-204ENST00000549549 DEFB109BQ30KR1 87 aa0.82□□□□□ -2.28
PRIM1-204ENST00000549549 PYY3Q5JQD4 70 aa0.82□□□□□ -2.28
PRIM1-204ENST00000549549 SLIT1O75093 1534 aa0.8□□□□□ -2.28
PRIM1-204ENST00000549549 GOLGA4Q13439 2230 aaKnown RBP0.8□□□□□ -2.28
PRIM1-204ENST00000549549 ANKRD17O75179 2603 aaKnown RBP0.8□□□□□ -2.28
PRIM1-204ENST00000549549 SAMD9Q5K651 1589 aa0.8□□□□□ -2.28
PRIM1-204ENST00000549549 D6R8Y8 96 aa0.8□□□□□ -2.28
PRIM1-204ENST00000549549 LEPROTL1O95214 131 aa0.8□□□□□ -2.28
PRIM1-204ENST00000549549 MUSTN1Q8IVN3 82 aa0.8□□□□□ -2.28
PRIM1-204ENST00000549549 PVALEFA0A1B0GWK0 134 aa0.79□□□□□ -2.28
PRIM1-204ENST00000549549 C9orf62Q8N4C0 152 aa0.79□□□□□ -2.28
PRIM1-204ENST00000549549 USF3Q68DE3 2245 aa0.79□□□□□ -2.28
PRIM1-204ENST00000549549 K7EP34 96 aa0.78□□□□□ -2.28
PRIM1-204ENST00000549549 CSMD3Q7Z407 3707 aa0.78□□□□□ -2.29
PRIM1-204ENST00000549549 PIEZO2Q9H5I5 2752 aa0.78□□□□□ -2.29
PRIM1-204ENST00000549549 DNAJC13O75165 2243 aa0.77□□□□□ -2.29
PRIM1-204ENST00000549549 UBR1Q8IWV7 1749 aa0.77□□□□□ -2.29
PRIM1-204ENST00000549549 RGPD4Q7Z3J3 1758 aa0.76□□□□□ -2.29
PRIM1-204ENST00000549549 SPRR1BP22528 89 aa0.76□□□□□ -2.29
PRIM1-204ENST00000549549 SMIM11AP58511 58 aa0.76□□□□□ -2.29
PRIM1-204ENST00000549549 USMG5Q96IX5 58 aa0.76□□□□□ -2.29
PRIM1-204ENST00000549549 FAT4Q6V0I7 4981 aa0.76□□□□□ -2.29
PRIM1-204ENST00000549549 CRYBG1Q9Y4K1 1723 aa0.75□□□□□ -2.29
PRIM1-204ENST00000549549 RB1CC1Q8TDY2 1594 aa0.75□□□□□ -2.29
PRIM1-204ENST00000549549 CCDC141Q6ZP82 1450 aa0.75□□□□□ -2.29
PRIM1-204ENST00000549549 PTPRZ1P23471 2315 aaPredicted RBP0.75□□□□□ -2.29
PRIM1-204ENST00000549549 HMGN2P05204 90 aaKnown RBP0.75□□□□□ -2.29
PRIM1-204ENST00000549549 UBE2D4Q9Y2X8 147 aa0.74□□□□□ -2.29
PRIM1-204ENST00000549549 LRRC37AA6NMS7 1700 aa0.73□□□□□ -2.29
PRIM1-204ENST00000549549 PEA15Q15121 130 aa0.73□□□□□ -2.29
PRIM1-204ENST00000549549 PLIN4Q96Q06 1357 aa0.72□□□□□ -2.29
PRIM1-204ENST00000549549 IGF2RP11717 2491 aa0.72□□□□□ -2.29
PRIM1-204ENST00000549549 MYH4Q9Y623 1939 aa0.7□□□□□ -2.3
PRIM1-204ENST00000549549 TSC2P49815 1807 aa0.7□□□□□ -2.3
PRIM1-204ENST00000549549 UNC79Q9P2D8 2635 aa0.69□□□□□ -2.3
PRIM1-204ENST00000549549 RGPD3A6NKT7 1758 aaPredicted RBP0.69□□□□□ -2.3
PRIM1-204ENST00000549549 NEXMIFQ5QGS0 1516 aa0.69□□□□□ -2.3
PRIM1-204ENST00000549549 ALKQ9UM73 1620 aa0.68□□□□□ -2.3
PRIM1-204ENST00000549549 IGLC2P0DOY2 106 aa0.67□□□□□ -2.3
PRIM1-204ENST00000549549 IGLC3P0DOY3 106 aa0.67□□□□□ -2.3
PRIM1-204ENST00000549549 COX8AP10176 69 aa0.67□□□□□ -2.3
PRIM1-204ENST00000549549 NMSQ5H8A3 153 aa0.67□□□□□ -2.3
PRIM1-204ENST00000549549 S100A16Q96FQ6 103 aaKnown RBP0.67□□□□□ -2.3
PRIM1-204ENST00000549549 NKTRP30414 1462 aaKnown RBP0.65□□□□□ -2.31
PRIM1-204ENST00000549549 CYB5AP00167 134 aa0.64□□□□□ -2.31
PRIM1-204ENST00000549549 AKAP6Q13023 2319 aa0.63□□□□□ -2.31
PRIM1-204ENST00000549549 ANKRD36A6QL64 1941 aa0.62□□□□□ -2.31
PRIM1-204ENST00000549549 FMN2Q9NZ56 1722 aa0.62□□□□□ -2.31
PRIM1-204ENST00000549549 PTPRQQ9UMZ3 2332 aa0.61□□□□□ -2.31
PRIM1-204ENST00000549549 MAST4O15021 2626 aa0.6□□□□□ -2.31
PRIM1-204ENST00000549549 NCOR2Q9Y618 2525 aa0.6□□□□□ -2.31
PRIM1-204ENST00000549549 AHNAK2Q8IVF2 5795 aa0.6□□□□□ -2.31
PRIM1-204ENST00000549549 CRIPTQ9P021 101 aa0.6□□□□□ -2.31
PRIM1-204ENST00000549549 PPLO60437 1756 aa0.6□□□□□ -2.31
PRIM1-204ENST00000549549 RABAC1Q9UI14 185 aa0.59□□□□□ -2.31
PRIM1-204ENST00000549549 MED14O60244 1454 aa0.59□□□□□ -2.32
PRIM1-204ENST00000549549 PKDREJQ9NTG1 2253 aa0.58□□□□□ -2.32
PRIM1-204ENST00000549549 DOPEY2Q9Y3R5 2298 aa0.58□□□□□ -2.32
PRIM1-204ENST00000549549 KIF14Q15058 1648 aa0.58□□□□□ -2.32
PRIM1-204ENST00000549549 ATP7BP35670 1465 aa0.58□□□□□ -2.32
PRIM1-204ENST00000549549 PKD1L3Q7Z443 1732 aa0.58□□□□□ -2.32
PRIM1-204ENST00000549549 HRNRQ86YZ3 2850 aaPredicted RBP0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms