RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 C10orf126Q8N4M7 172 aa3.43□□□□□ -1.86
AC078880.2-201ENST00000547948 RMI2Q96E14 147 aa3.43□□□□□ -1.86
AC078880.2-201ENST00000547948 HUWE1Q7Z6Z7 4374 aaKnown RBP3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 IGHV3-64A0A075B6Q5 118 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 IGKV2D-26A0A0A0MRZ7 120 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 SMIM1B2RUZ4 78 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 IGLL5B9A064 214 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 NDUFA1O15239 70 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 SPINK8P0C7L1 97 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 IGHV3-30-3P0DP02 117 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 XCL1P47992 114 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 UBE2V1Q13404 147 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 LINC01556Q5JQF7 62 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 C10orf25Q5T742 122 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 CLPSL2Q6UWE3 100 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 CD164L2Q6UWJ8 174 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 Q6ZVH6 145 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 UBE2DNLQ8IWF7 75 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 LINC00269Q8N2A0 174 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 HIST1H4GQ99525 98 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 CDKN2A-AS1Q9UH64 79 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 NDUFA12Q9UI09 145 aa3.42□□□□□ -1.86
AC078880.2-201ENST00000547948 A0A087WZ39 114 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 IGLV5-39A0A0G2JS06 123 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 TIMM17BO60830 172 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 IGHV3-30P01768 117 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 IGHV3-33P01772 117 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 IGHV3-30-5P0DP03 117 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 HINT1P49773 126 aaPredicted RBP3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 SRSF9Q13242 221 aaKnown RBP eCLIP3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 MEIG1Q5JSS6 88 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 C2orf91Q6ZV80 131 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 COX7B2Q8TF08 81 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 FAM104AQ969W3 186 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 UPK3BQ9BT76 320 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 SPANXB1Q9NS25 103 aaPredicted RBP3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 PRR34Q9NV39 138 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 KLK12Q9UKR0 248 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 NOTCH3Q9UM47 2321 aa3.41□□□□□ -1.86
AC078880.2-201ENST00000547948 NACAE9PAV3 2078 aa3.4□□□□□ -1.86
AC078880.2-201ENST00000547948 DNAH9Q9NYC9 4486 aa3.4□□□□□ -1.86
AC078880.2-201ENST00000547948 TRAV8-3A0A0A6YYJ7 113 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 IGHV3OR16-9A0A0B4J2B5 98 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 DNAH10OSP0CZ25 163 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 TSPEAR-AS2P59090 65 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 CKS1BP61024 79 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 RPL24P83731 157 aaKnown RBP3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 ESRGQ1W209 222 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 TTC32Q5I0X7 151 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 BVES-AS1Q5T3Y7 98 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 WFDC10BQ8IUB3 73 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 Q8IZM0 81 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 CEND1Q8N111 149 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 ORAOV1Q8WV07 137 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 CHCHD10Q8WYQ3 142 aaPredicted RBP3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 UBE2WQ96B02 151 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 SNHG12Q9BXW3 62 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 Q9H8V8 135 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 TOMM7Q9P0U1 55 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 NBEAL1Q6ZS30 2694 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 NBEAL2Q6ZNJ1 2754 aa3.4□□□□□ -1.87
AC078880.2-201ENST00000547948 MGAM2Q2M2H8 2515 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 A0A0J9YXY3 114 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 IFITM1P13164 125 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 COX6A2Q02221 97 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 C6orf226Q5I0X4 101 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 LYRM7Q5U5X0 104 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 C5orf38Q86SI9 138 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 SPANXDQ9BXN6 97 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 TTTY13Q9BZ97 58 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 SPANXCQ9NY87 97 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 TP73-AS1Q9UF72 201 aa3.39□□□□□ -1.87
AC078880.2-201ENST00000547948 MEGF8Q7Z7M0 2845 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 IGLV10-54A0A075B6I4 117 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 IBA57-AS1B1ANH7 110 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 F8WDY8 70 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 SPAG11BQ08648 103 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 Q75L30 129 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 MAPKAPK5-AS1Q8N8E1 139 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 MPLKIPQ8TAP9 179 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 PPDPFQ9H3Y8 114 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 LINC00588Q9Y4M8 146 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 NOTCH1P46531 2555 aa3.38□□□□□ -1.87
AC078880.2-201ENST00000547948 IGKV2D-24A0A075B6R9 120 aa3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 SMIM13P0DJ93 91 aa3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 SEC61BP60468 96 aaKnown RBP3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 GAGE2BQ13066 116 aa3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 COX17Q14061 63 aa3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 GAGE2EQ4V326 116 aa3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 GAGE2AQ6NT46 116 aa3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 ENHOQ6UWT2 76 aa3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 RAB37Q96AX2 223 aa3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 ZNF625Q96I27 306 aaPredicted RBP3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 NHP2Q9NX24 153 aaKnown RBP3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 GAGE2DQ9UEU5 116 aa3.37□□□□□ -1.87
AC078880.2-201ENST00000547948 A0A0B4J2C4 111 aa3.36□□□□□ -1.87
AC078880.2-201ENST00000547948 FXYD2P54710 66 aa3.36□□□□□ -1.87
AC078880.2-201ENST00000547948 Q9HAA7 133 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms