RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 LINC00299Q6ZSB3 139 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 PLPP5Q8NEB5 264 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 FDCSPQ8NFU4 85 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 VSTM2AQ8TAG5 236 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 PP6455Q8WZ26 134 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 SEC11CQ9BY50 192 aa1.91□□□□□ -2.1
SCAF11-210ENST00000547654 TRAV17A0A0B4J275 112 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 LCE6AA0A183 80 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 TMEM30CPA0ZSE6 113 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 ATP6V1G2-DDX39BF2Z307 99 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 PIN1P1O15428 100 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 BTG2P78543 158 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 OR2T2Q6IF00 324 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 Q6ZS92 163 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 C12orf57Q99622 126 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 NAA60Q9H7X0 242 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 MED12LQ86YW9 2145 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 SCN3AQ9NY46 2000 aa1.9□□□□□ -2.11
SCAF11-210ENST00000547654 VPS13DQ5THJ4 4388 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 LOC100130705A0A1B0GUX0 176 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 C20orf202A1L168 122 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 JMJD7-PLA2G4BH0Y9G9 81 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 M0R2N4 97 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 INE1O15225 51 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 SNCGO76070 127 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 PPYP01298 95 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 IL5P05113 134 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 PIPP12273 146 aaPredicted RBP1.89□□□□□ -2.11
SCAF11-210ENST00000547654 IL7P13232 177 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 PPDPFLQ8WWR9 84 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 SPTSSAQ969W0 71 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 AGPAT4-IT1Q9H0P7 198 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 TMEM242Q9NWH2 141 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 ZFP30Q9Y2G7 519 aa1.89□□□□□ -2.11
SCAF11-210ENST00000547654 DNAH2Q9P225 4427 aa1.88□□□□□ -2.11
SCAF11-210ENST00000547654 SPTBP11277 2137 aa1.88□□□□□ -2.11
SCAF11-210ENST00000547654 WNK2Q9Y3S1 2297 aa1.88□□□□□ -2.11
SCAF11-210ENST00000547654 A0A0J9YY99 117 aa1.88□□□□□ -2.11
SCAF11-210ENST00000547654 A6NIN4 97 aa1.88□□□□□ -2.11
SCAF11-210ENST00000547654 PITX3O75364 302 aa1.88□□□□□ -2.11
SCAF11-210ENST00000547654 LINC00322Q6ZN03 302 aaPredicted RBP1.88□□□□□ -2.11
SCAF11-210ENST00000547654 ZNF563Q8TA94 476 aa1.88□□□□□ -2.11
SCAF11-210ENST00000547654 WFDC10AQ9H1F0 79 aa1.88□□□□□ -2.11
SCAF11-210ENST00000547654 BOKQ9UMX3 212 aaPredicted RBP1.88□□□□□ -2.11
SCAF11-210ENST00000547654 TRAV23DV6A0A075B6W5 121 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 IGKV3D-7A0A0C4DH55 119 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 IGKV3OR2-268A0A0C4DH90 116 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 SPTY2D1-AS1A0A0U1RR47 76 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 CCDC179H3BU77 68 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 KLF7O75840 302 aaPredicted RBP1.87□□□□□ -2.11
SCAF11-210ENST00000547654 NDUFB6O95139 128 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 GYPBP06028 91 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 PIRTP0C851 137 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 GNG4P50150 75 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 PCOTHQ58A44 107 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 C6orf52Q5T4I8 152 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 SPANXN1Q5VSR9 72 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 LYPD5Q6UWN5 251 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 ALPK2Q86TB3 2170 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 ZCCHC13Q8WW36 166 aaKnown RBP1.87□□□□□ -2.11
SCAF11-210ENST00000547654 SPANXDQ9BXN6 97 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 CYSTM1Q9H1C7 97 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 DNAH17Q9UFH2 4485 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 APOBP04114 4563 aaKnown RBP1.87□□□□□ -2.11
SCAF11-210ENST00000547654 KIAA1549Q9HCM3 1950 aa1.87□□□□□ -2.11
SCAF11-210ENST00000547654 LOC110117498A0A087WWA1 95 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 TRBV6-7A0A0A0MS04 114 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 IGKCP01834 107 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 TPPP2P59282 170 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 IQCJQ1A5X6 159 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 Q56UQ5 140 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 GDF5OSQ5U4N7 250 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 RPL7L1Q6DKI1 246 aaKnown RBP1.86□□□□□ -2.11
SCAF11-210ENST00000547654 CSAG1Q6PB30 78 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 UNQ6190/PRO20217Q6UXQ8 127 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 ATG5Q9H1Y0 275 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 MRPL36Q9P0J6 103 aaKnown RBP1.86□□□□□ -2.11
SCAF11-210ENST00000547654 DNAH6Q9C0G6 4158 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 FAT1Q14517 4588 aa1.86□□□□□ -2.11
SCAF11-210ENST00000547654 PIGBOS1A0A0B4J2F0 54 aa1.85□□□□□ -2.11
SCAF11-210ENST00000547654 APOC4-APOC2K7ER74 178 aa1.85□□□□□ -2.11
SCAF11-210ENST00000547654 HCRTO43612 131 aa1.85□□□□□ -2.11
SCAF11-210ENST00000547654 APOC2P02655 101 aa1.85□□□□□ -2.11
SCAF11-210ENST00000547654 PRB4P10163 310 aaPredicted RBP1.85□□□□□ -2.11
SCAF11-210ENST00000547654 PPP3R1P63098 170 aa1.85□□□□□ -2.11
SCAF11-210ENST00000547654 SPATA45Q537H7 98 aa1.85□□□□□ -2.11
SCAF11-210ENST00000547654 NDUFA12Q9UI09 145 aa1.85□□□□□ -2.11
SCAF11-210ENST00000547654 SERP1Q9Y6X1 66 aa1.85□□□□□ -2.11
SCAF11-210ENST00000547654 PKD1P98161 4303 aa1.85□□□□□ -2.11
SCAF11-210ENST00000547654 EXPH5Q8NEV8 1989 aa1.85□□□□□ -2.11
SCAF11-210ENST00000547654 IGKV3-7A0A075B6H7 116 aa1.84□□□□□ -2.11
SCAF11-210ENST00000547654 IGKV2-40A0A087WW87 121 aaPredicted RBP1.84□□□□□ -2.11
SCAF11-210ENST00000547654 IGKV2D-40P01614 121 aaPredicted RBP1.84□□□□□ -2.11
SCAF11-210ENST00000547654 IGHV3-30P01768 117 aa1.84□□□□□ -2.11
SCAF11-210ENST00000547654 IGHV3-30-5P0DP03 117 aa1.84□□□□□ -2.11
SCAF11-210ENST00000547654 SLC25A6P12236 298 aa1.84□□□□□ -2.11
SCAF11-210ENST00000547654 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
SCAF11-210ENST00000547654 DMAC1Q96GE9 116 aa1.84□□□□□ -2.11
SCAF11-210ENST00000547654 TMEM141Q96I45 108 aa1.84□□□□□ -2.11
SCAF11-210ENST00000547654 PPP3R2Q96LZ3 170 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms