RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 INAFM2P0DMQ5 153 aa11.62□□□□□ -0.55
BRF1-208ENST00000546997 C9orf153Q5TBE3 101 aa11.62□□□□□ -0.55
BRF1-208ENST00000546997 DGAT2L7PQ6IED9 249 aa11.61□□□□□ -0.55
BRF1-208ENST00000546997 NOP10Q9NPE3 64 aaKnown RBP11.61□□□□□ -0.55
BRF1-208ENST00000546997 LINC00308Q8TCZ7 52 aa11.61□□□□□ -0.55
BRF1-208ENST00000546997 CHCHD7Q9BUK0 85 aa11.61□□□□□ -0.55
BRF1-208ENST00000546997 RPS28P62857 69 aaKnown RBP11.6□□□□□ -0.55
BRF1-208ENST00000546997 FAM19A3Q7Z5A8 133 aa11.6□□□□□ -0.55
BRF1-208ENST00000546997 RETNQ9HD89 108 aa11.6□□□□□ -0.55
BRF1-208ENST00000546997 TRGV1A0A0A0MS02 117 aa11.59□□□□□ -0.55
BRF1-208ENST00000546997 IGLV5-39A0A0G2JS06 123 aa11.59□□□□□ -0.55
BRF1-208ENST00000546997 Q6ZTI0 123 aa11.59□□□□□ -0.55
BRF1-208ENST00000546997 SMIM9A6NGZ8 99 aa11.58□□□□□ -0.56
BRF1-208ENST00000546997 DEFB4AO15263 64 aa11.58□□□□□ -0.56
BRF1-208ENST00000546997 COX7CP15954 63 aa11.58□□□□□ -0.56
BRF1-208ENST00000546997 DAZ2Q13117 558 aaKnown RBP11.58□□□□□ -0.56
BRF1-208ENST00000546997 CRYGAP11844 174 aa11.58□□□□□ -0.56
BRF1-208ENST00000546997 HIST1H4AP62805 103 aaKnown RBP11.58□□□□□ -0.56
BRF1-208ENST00000546997 Q8NAQ8 132 aa11.58□□□□□ -0.56
BRF1-208ENST00000546997 SMCR5Q8TEV8 140 aa11.58□□□□□ -0.56
BRF1-208ENST00000546997 OVOL2Q9BRP0 275 aa11.58□□□□□ -0.56
BRF1-208ENST00000546997 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
BRF1-208ENST00000546997 HERVK_113P63121 156 aa11.57□□□□□ -0.56
BRF1-208ENST00000546997 HUWE1Q7Z6Z7 4374 aaKnown RBP11.56□□□□□ -0.56
BRF1-208ENST00000546997 ATOX1O00244 68 aa11.56□□□□□ -0.56
BRF1-208ENST00000546997 DAZ4Q86SG3 579 aaKnown RBP11.56□□□□□ -0.56
BRF1-208ENST00000546997 DAZ3Q9NR90 486 aaKnown RBP11.56□□□□□ -0.56
BRF1-208ENST00000546997 COL7A1Q02388 2944 aa11.56□□□□□ -0.56
BRF1-208ENST00000546997 J3KT08 172 aa11.56□□□□□ -0.56
BRF1-208ENST00000546997 BAALC-AS2P0C853 105 aa11.56□□□□□ -0.56
BRF1-208ENST00000546997 MEGF8Q7Z7M0 2845 aa11.56□□□□□ -0.56
BRF1-208ENST00000546997 NPC2P61916 151 aa11.55□□□□□ -0.56
BRF1-208ENST00000546997 CDKN2A-AS1Q9UH64 79 aa11.55□□□□□ -0.56
BRF1-208ENST00000546997 LINC00694P0DN24 101 aa11.54□□□□□ -0.56
BRF1-208ENST00000546997 MIFP14174 115 aa11.54□□□□□ -0.56
BRF1-208ENST00000546997 CEMP1Q6PRD7 247 aaPredicted RBP11.54□□□□□ -0.56
BRF1-208ENST00000546997 MRAPQ8TCY5 172 aa11.54□□□□□ -0.56
BRF1-208ENST00000546997 PRKDCP78527 4128 aaKnown RBP11.54□□□□□ -0.56
BRF1-208ENST00000546997 DNAH9Q9NYC9 4486 aa11.53□□□□□ -0.56
BRF1-208ENST00000546997 IGHV3-38A0A0C4DH36 116 aa11.52□□□□□ -0.56
BRF1-208ENST00000546997 C2orf48Q96LS8 159 aa11.52□□□□□ -0.57
BRF1-208ENST00000546997 Q9H8V8 135 aa11.52□□□□□ -0.57
BRF1-208ENST00000546997 DEFB130BP0DP73 79 aa11.51□□□□□ -0.57
BRF1-208ENST00000546997 DEFB130AP0DP74 79 aa11.51□□□□□ -0.57
BRF1-208ENST00000546997 C5orf47Q569G3 176 aa11.51□□□□□ -0.57
BRF1-208ENST00000546997 CELA1Q9UNI1 258 aa11.51□□□□□ -0.57
BRF1-208ENST00000546997 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
BRF1-208ENST00000546997 CSDC2Q9Y534 153 aaKnown RBP11.51□□□□□ -0.57
BRF1-208ENST00000546997 TRGV2A0A075B6R0 118 aa11.5□□□□□ -0.57
BRF1-208ENST00000546997 TRBV10-1A0A0K0K1A3 114 aa11.5□□□□□ -0.57
BRF1-208ENST00000546997 K7EQD1 137 aa11.5□□□□□ -0.57
BRF1-208ENST00000546997 RPL28P46779 137 aaKnown RBP11.5□□□□□ -0.57
BRF1-208ENST00000546997 RNASE13Q5GAN3 156 aaKnown RBP11.5□□□□□ -0.57
BRF1-208ENST00000546997 LINC00612Q8N6U2 182 aa11.5□□□□□ -0.57
BRF1-208ENST00000546997 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
BRF1-208ENST00000546997 KRTAP3-2Q9BYR7 98 aa11.5□□□□□ -0.57
BRF1-208ENST00000546997 TRAV13-2A0A0B4J235 113 aa11.5□□□□□ -0.57
BRF1-208ENST00000546997 STAB2Q8WWQ8 2551 aa11.49□□□□□ -0.57
BRF1-208ENST00000546997 GAGE2AQ6NT46 116 aa11.49□□□□□ -0.57
BRF1-208ENST00000546997 ZNF625Q96I27 306 aaPredicted RBP11.49□□□□□ -0.57
BRF1-208ENST00000546997 TM2D3Q9BRN9 247 aa11.49□□□□□ -0.57
BRF1-208ENST00000546997 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.48□□□□□ -0.57
BRF1-208ENST00000546997 IGKV2-29A2NJV5 120 aaPredicted RBP11.48□□□□□ -0.57
BRF1-208ENST00000546997 RPL36AP83881 106 aaKnown RBP11.48□□□□□ -0.57
BRF1-208ENST00000546997 RPL36ALQ969Q0 106 aaKnown RBP11.48□□□□□ -0.57
BRF1-208ENST00000546997 LYRM9A8MSI8 78 aa11.48□□□□□ -0.57
BRF1-208ENST00000546997 SOSTDC1Q6X4U4 206 aa11.48□□□□□ -0.57
BRF1-208ENST00000546997 LINC00242Q5T6M2 205 aa11.47□□□□□ -0.57
BRF1-208ENST00000546997 SMIM1B2RUZ4 78 aa11.47□□□□□ -0.57
BRF1-208ENST00000546997 Q6JHZ5 121 aa11.47□□□□□ -0.57
BRF1-208ENST00000546997 OBSCN-AS1Q96MR7 158 aa11.46□□□□□ -0.58
BRF1-208ENST00000546997 RPL18AQ02543 176 aaKnown RBP11.45□□□□□ -0.58
BRF1-208ENST00000546997 TMEM258P61165 79 aa11.45□□□□□ -0.58
BRF1-208ENST00000546997 COX6A2Q02221 97 aa11.45□□□□□ -0.58
BRF1-208ENST00000546997 OR13C6PQ8NH95 151 aa11.45□□□□□ -0.58
BRF1-208ENST00000546997 A0A0J9YWU9 116 aa11.44□□□□□ -0.58
BRF1-208ENST00000546997 TRBV6-4A0A1B0GX49 114 aa11.44□□□□□ -0.58
BRF1-208ENST00000546997 H0YGX0 51 aa11.44□□□□□ -0.58
BRF1-208ENST00000546997 SPART-AS1P0CW21 52 aa11.44□□□□□ -0.58
BRF1-208ENST00000546997 NTM-AS1Q6ZSK4 140 aa11.44□□□□□ -0.58
BRF1-208ENST00000546997 C11orf68Q9H3H3 251 aaKnown RBP11.44□□□□□ -0.58
BRF1-208ENST00000546997 DAD1P61803 113 aa11.43□□□□□ -0.58
BRF1-208ENST00000546997 FHL2Q14192 279 aa11.43□□□□□ -0.58
BRF1-208ENST00000546997 FAM218AQ96MZ4 157 aa11.43□□□□□ -0.58
BRF1-208ENST00000546997 TRGV4A0A0C4DH28 118 aa11.42□□□□□ -0.58
BRF1-208ENST00000546997 DNAL4O96015 105 aa11.42□□□□□ -0.58
BRF1-208ENST00000546997 SERP2Q8N6R1 65 aa11.42□□□□□ -0.58
BRF1-208ENST00000546997 F5H768 121 aa11.41□□□□□ -0.58
BRF1-208ENST00000546997 FAM19A5Q7Z5A7 132 aaPredicted RBP11.41□□□□□ -0.58
BRF1-208ENST00000546997 B9D2Q9BPU9 175 aa11.41□□□□□ -0.58
BRF1-208ENST00000546997 CRPP02741 224 aa11.41□□□□□ -0.58
BRF1-208ENST00000546997 LOC100131303A0A0U1RQF7 123 aa11.4□□□□□ -0.58
BRF1-208ENST00000546997 KLK5Q9Y337 293 aaPredicted RBP11.39□□□□□ -0.59
BRF1-208ENST00000546997 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
BRF1-208ENST00000546997 FBN3Q75N90 2809 aa11.37□□□□□ -0.59
BRF1-208ENST00000546997 UPK3BQ9BT76 320 aa11.37□□□□□ -0.59
BRF1-208ENST00000546997 HTN3P15516 51 aa11.36□□□□□ -0.59
BRF1-208ENST00000546997 Q6ZTC4 211 aa11.36□□□□□ -0.59
BRF1-208ENST00000546997 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
BRF1-208ENST00000546997 hADV29S1A0JD25 119 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms