RNA–Protein interactions for RNA: ENST00000546872.1

SLC4A8-208, Transcript of solute carrier family 4 member 8, human

TSL 2

Gene SLC4A8, Length 493 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC4A8-208	ENST00000546872	HERV-K104	P63124	156 aa		4.29	□□□□□ -1.72
SLC4A8-208	ENST00000546872	SCGB1D4	Q6XE38	83 aa		4.29	□□□□□ -1.72
SLC4A8-208	ENST00000546872	CEND1	Q8N111	149 aa		4.29	□□□□□ -1.72
SLC4A8-208	ENST00000546872	LINC00269	Q8N2A0	174 aa		4.29	□□□□□ -1.72
SLC4A8-208	ENST00000546872	ORAOV1	Q8WV07	137 aa		4.29	□□□□□ -1.72
SLC4A8-208	ENST00000546872	UPK3B	Q9BT76	320 aa		4.29	□□□□□ -1.72
SLC4A8-208	ENST00000546872	PPDPF	Q9H3Y8	114 aa		4.29	□□□□□ -1.72
SLC4A8-208	ENST00000546872	NDUFA12	Q9UI09	145 aa		4.29	□□□□□ -1.72
SLC4A8-208	ENST00000546872	COL7A1	Q02388	2944 aa		4.28	□□□□□ -1.72
SLC4A8-208	ENST00000546872		A0A0J9YXY3	114 aa		4.28	□□□□□ -1.72
SLC4A8-208	ENST00000546872		A6NDN8	102 aa		4.28	□□□□□ -1.72
SLC4A8-208	ENST00000546872	TMEM238	C9JI98	176 aa		4.28	□□□□□ -1.72
SLC4A8-208	ENST00000546872	DNAH10OS	P0CZ25	163 aa		4.28	□□□□□ -1.72
SLC4A8-208	ENST00000546872	CCL18	P55774	89 aa		4.28	□□□□□ -1.72
SLC4A8-208	ENST00000546872	MIA	Q16674	131 aa		4.28	□□□□□ -1.72
SLC4A8-208	ENST00000546872	ZNF625	Q96I27	306 aa	Predicted RBP	4.28	□□□□□ -1.72
SLC4A8-208	ENST00000546872	HIST1H4G	Q99525	98 aa		4.28	□□□□□ -1.72
SLC4A8-208	ENST00000546872		A0A1B0GWB2	263 aa		4.27	□□□□□ -1.73
SLC4A8-208	ENST00000546872	ENHO	Q6UWT2	76 aa		4.27	□□□□□ -1.73
SLC4A8-208	ENST00000546872	WFDC10B	Q8IUB3	73 aa		4.27	□□□□□ -1.73
SLC4A8-208	ENST00000546872		Q8IZM0	81 aa		4.27	□□□□□ -1.73
SLC4A8-208	ENST00000546872	C10orf126	Q8N4M7	172 aa		4.27	□□□□□ -1.73
SLC4A8-208	ENST00000546872	COX7B2	Q8TF08	81 aa		4.27	□□□□□ -1.73
SLC4A8-208	ENST00000546872	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.27	□□□□□ -1.73
SLC4A8-208	ENST00000546872	SPANXD	Q9BXN6	97 aa		4.27	□□□□□ -1.73
SLC4A8-208	ENST00000546872	SPANXC	Q9NY87	97 aa		4.27	□□□□□ -1.73
SLC4A8-208	ENST00000546872	IGHV3-64	A0A075B6Q5	118 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	IGKV3OR2-268	A0A0C4DH90	116 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	COX7A2L	O14548	114 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	APOM	O95445	188 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	IGHV3-30	P01768	117 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	IGHV3-30-5	P0DP03	117 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	IFITM1	P13164	125 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	CXCL5	P42830	114 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	CIRBP	Q14011	172 aa	Known RBP	4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	BATF	Q16520	125 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	COPS9	Q8WXC6	57 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	LITAF	Q99732	161 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	KLK12	Q9UKR0	248 aa		4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	KLK5	Q9Y337	293 aa	Predicted RBP	4.26	□□□□□ -1.73
SLC4A8-208	ENST00000546872	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	NUPR2	A6NF83	97 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	IGLL5	B9A064	214 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	CRP	P02741	224 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	XCL1	P47992	114 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	FXYD2	P54710	66 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	KIAA0087	Q14695	138 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	KRTAP26-1	Q6PEX3	210 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	C5orf38	Q86SI9	138 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	MUC7	Q8TAX7	377 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872		Q9H8V8	135 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	APLN	Q9ULZ1	77 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	LINC00588	Q9Y4M8	146 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	MEGF8	Q7Z7M0	2845 aa		4.25	□□□□□ -1.73
SLC4A8-208	ENST00000546872	IBA57-AS1	B1ANH7	110 aa		4.24	□□□□□ -1.73
SLC4A8-208	ENST00000546872		F8WDY8	70 aa		4.24	□□□□□ -1.73
SLC4A8-208	ENST00000546872	TAX1BP3	O14907	124 aa		4.24	□□□□□ -1.73
SLC4A8-208	ENST00000546872	IGHV3-33	P01772	117 aa		4.24	□□□□□ -1.73
SLC4A8-208	ENST00000546872	SMIM13	P0DJ93	91 aa		4.24	□□□□□ -1.73
SLC4A8-208	ENST00000546872	RPL24	P83731	157 aa	Known RBP	4.24	□□□□□ -1.73
SLC4A8-208	ENST00000546872	C6orf226	Q5I0X4	101 aa		4.24	□□□□□ -1.73
SLC4A8-208	ENST00000546872	CLPSL2	Q6UWE3	100 aa		4.24	□□□□□ -1.73
SLC4A8-208	ENST00000546872	UBE2W	Q96B02	151 aa		4.24	□□□□□ -1.73
SLC4A8-208	ENST00000546872	DNAH9	Q9NYC9	4486 aa		4.24	□□□□□ -1.73
SLC4A8-208	ENST00000546872	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.23	□□□□□ -1.73
SLC4A8-208	ENST00000546872	PRSS2	P07478	247 aa		4.23	□□□□□ -1.73
SLC4A8-208	ENST00000546872	COX17	Q14061	63 aa		4.23	□□□□□ -1.73
SLC4A8-208	ENST00000546872	ADAMTSL4-AS1	Q5T5F5	129 aa		4.23	□□□□□ -1.73
SLC4A8-208	ENST00000546872	IGLV10-54	A0A075B6I4	117 aa		4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872		A0A0B4J2C4	111 aa		4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872	LOC107984156	A0A0G2JMH3	177 aa		4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872		A0A1B0GV90	55 aa		4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872	MUSTN1	Q8IVN3	82 aa		4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872	ARL17A	Q8IVW1	177 aa		4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872	RMI2	Q96E14	147 aa		4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872	NHP2	Q9NX24	153 aa	Known RBP	4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872	TOMM7	Q9P0U1	55 aa		4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872	STAB2	Q8WWQ8	2551 aa		4.22	□□□□□ -1.73
SLC4A8-208	ENST00000546872		A4D1N5	150 aa		4.21	□□□□□ -1.74
SLC4A8-208	ENST00000546872	CFC1B	P0CG36	223 aa		4.21	□□□□□ -1.74
SLC4A8-208	ENST00000546872	CFC1	P0CG37	223 aa		4.21	□□□□□ -1.74
SLC4A8-208	ENST00000546872	CKS1B	P61024	79 aa		4.21	□□□□□ -1.74
SLC4A8-208	ENST00000546872	MEIG1	Q5JSS6	88 aa		4.21	□□□□□ -1.74
SLC4A8-208	ENST00000546872	LINC00308	Q8TCZ7	52 aa		4.21	□□□□□ -1.74
SLC4A8-208	ENST00000546872	C2orf48	Q96LS8	159 aa		4.21	□□□□□ -1.74
SLC4A8-208	ENST00000546872	ERG28	Q9UKR5	140 aa		4.21	□□□□□ -1.74
SLC4A8-208	ENST00000546872	PRY	O14603	147 aa		4.2	□□□□□ -1.74
SLC4A8-208	ENST00000546872	SPAG11B	Q08648	103 aa		4.2	□□□□□ -1.74
SLC4A8-208	ENST00000546872	PRO1854	Q9UHT4	67 aa		4.2	□□□□□ -1.74
SLC4A8-208	ENST00000546872	IGKV2D-24	A0A075B6R9	120 aa		4.19	□□□□□ -1.74
SLC4A8-208	ENST00000546872	TRBV30	A0A0K0K1B3	111 aa		4.19	□□□□□ -1.74
SLC4A8-208	ENST00000546872	LINC00158	P58513	81 aa		4.19	□□□□□ -1.74
SLC4A8-208	ENST00000546872	MIR7-3HG	Q8N6C7	128 aa		4.19	□□□□□ -1.74
SLC4A8-208	ENST00000546872	C15orf56	Q8N910	161 aa		4.19	□□□□□ -1.74
SLC4A8-208	ENST00000546872	DNHD1	Q96M86	4753 aa		4.18	□□□□□ -1.74
SLC4A8-208	ENST00000546872	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.18	□□□□□ -1.74
SLC4A8-208	ENST00000546872		A0A1W2PPM0	123 aa		4.18	□□□□□ -1.74
SLC4A8-208	ENST00000546872		H3BUT2	72 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms