RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 PRR3P79522 188 aaKnown RBP8.15□□□□□ -1.11
CCDC38-202ENST00000546386 COX7B2Q8TF08 81 aa8.15□□□□□ -1.11
CCDC38-202ENST00000546386 TMEM238C9JI98 176 aa8.14□□□□□ -1.11
CCDC38-202ENST00000546386 SS18Q15532 418 aa8.14□□□□□ -1.11
CCDC38-202ENST00000546386 SCGB1C2P0DMR2 95 aa8.14□□□□□ -1.11
CCDC38-202ENST00000546386 MALP21145 153 aa8.14□□□□□ -1.11
CCDC38-202ENST00000546386 PLECQ15149 4684 aaKnown RBP8.13□□□□□ -1.11
CCDC38-202ENST00000546386 FBN3Q75N90 2809 aa8.13□□□□□ -1.11
CCDC38-202ENST00000546386 TAL2Q16559 108 aa8.13□□□□□ -1.11
CCDC38-202ENST00000546386 GAGE12HA6NDE8 117 aa8.13□□□□□ -1.11
CCDC38-202ENST00000546386 NDUFA1O15239 70 aa8.13□□□□□ -1.11
CCDC38-202ENST00000546386 ENHOQ6UWT2 76 aa8.13□□□□□ -1.11
CCDC38-202ENST00000546386 MIR7-3HGQ8N6C7 128 aa8.13□□□□□ -1.11
CCDC38-202ENST00000546386 HIGD2BQ4VC39 106 aa8.12□□□□□ -1.11
CCDC38-202ENST00000546386 WFDC2Q14508 124 aa8.12□□□□□ -1.11
CCDC38-202ENST00000546386 PRO1854Q9UHT4 67 aa8.12□□□□□ -1.11
CCDC38-202ENST00000546386 K7EP34 96 aa8.11□□□□□ -1.11
CCDC38-202ENST00000546386 C10orf25Q5T742 122 aa8.11□□□□□ -1.11
CCDC38-202ENST00000546386 SH2D6Q7Z4S9 175 aa8.11□□□□□ -1.11
CCDC38-202ENST00000546386 A0A087WZ39 114 aa8.11□□□□□ -1.11
CCDC38-202ENST00000546386 A0A1B0GUV1 79 aa8.11□□□□□ -1.11
CCDC38-202ENST00000546386 MIAQ16674 131 aa8.11□□□□□ -1.11
CCDC38-202ENST00000546386 RNF151Q2KHN1 245 aa8.11□□□□□ -1.11
CCDC38-202ENST00000546386 LELP1Q5T871 98 aa8.11□□□□□ -1.11
CCDC38-202ENST00000546386 LINC00308Q8TCZ7 52 aa8.11□□□□□ -1.11
CCDC38-202ENST00000546386 SPANXB1Q9NS25 103 aaPredicted RBP8.11□□□□□ -1.11
CCDC38-202ENST00000546386 H7C423 109 aa8.1□□□□□ -1.11
CCDC38-202ENST00000546386 LECT2O14960 151 aa8.1□□□□□ -1.11
CCDC38-202ENST00000546386 RPL24P83731 157 aaKnown RBP8.1□□□□□ -1.11
CCDC38-202ENST00000546386 STARD9Q9P2P6 4700 aa8.1□□□□□ -1.11
CCDC38-202ENST00000546386 COX7A2LO14548 114 aa8.09□□□□□ -1.12
CCDC38-202ENST00000546386 SMAGPQ0VAQ4 97 aa8.09□□□□□ -1.12
CCDC38-202ENST00000546386 CIRBPQ14011 172 aaKnown RBP8.09□□□□□ -1.12
CCDC38-202ENST00000546386 UNQ6190/PRO20217Q6UXQ8 127 aa8.09□□□□□ -1.12
CCDC38-202ENST00000546386 CLEC2BQ92478 149 aa8.09□□□□□ -1.12
CCDC38-202ENST00000546386 SPATA25Q9BR10 227 aa8.09□□□□□ -1.12
CCDC38-202ENST00000546386 TCL1BO95988 128 aa8.08□□□□□ -1.12
CCDC38-202ENST00000546386 CKS1BP61024 79 aa8.08□□□□□ -1.12
CCDC38-202ENST00000546386 GTF2H5Q6ZYL4 71 aa8.08□□□□□ -1.12
CCDC38-202ENST00000546386 A0A1B0GWB2 263 aa8.08□□□□□ -1.12
CCDC38-202ENST00000546386 CRPP02741 224 aa8.08□□□□□ -1.12
CCDC38-202ENST00000546386 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
CCDC38-202ENST00000546386 FAM229AH3BQW9 127 aa8.07□□□□□ -1.12
CCDC38-202ENST00000546386 RPL13AP40429 203 aaKnown RBP8.07□□□□□ -1.12
CCDC38-202ENST00000546386 TM2D3Q9BRN9 247 aa8.07□□□□□ -1.12
CCDC38-202ENST00000546386 IGKV2D-24A0A075B6R9 120 aa8.07□□□□□ -1.12
CCDC38-202ENST00000546386 FOXI1Q12951 378 aa8.07□□□□□ -1.12
CCDC38-202ENST00000546386 ETDBQ3ZM63 59 aa8.07□□□□□ -1.12
CCDC38-202ENST00000546386 DNAH1Q9P2D7 4330 aa8.06□□□□□ -1.12
CCDC38-202ENST00000546386 TRIAP1O43715 76 aa8.06□□□□□ -1.12
CCDC38-202ENST00000546386 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
CCDC38-202ENST00000546386 CD164L2Q6UWJ8 174 aa8.06□□□□□ -1.12
CCDC38-202ENST00000546386 CASC10Q5T4H9 136 aa8.06□□□□□ -1.12
CCDC38-202ENST00000546386 FAM19A3Q7Z5A8 133 aa8.06□□□□□ -1.12
CCDC38-202ENST00000546386 SRRM2Q9UQ35 2752 aaKnown RBP8.06□□□□□ -1.12
CCDC38-202ENST00000546386 KMT2AQ03164 3969 aa8.05□□□□□ -1.12
CCDC38-202ENST00000546386 XAGE1AQ9HD64 81 aa8.05□□□□□ -1.12
CCDC38-202ENST00000546386 LINC00588Q9Y4M8 146 aa8.05□□□□□ -1.12
CCDC38-202ENST00000546386 OR13C6PQ8NH95 151 aa8.04□□□□□ -1.12
CCDC38-202ENST00000546386 SPANXDQ9BXN6 97 aa8.04□□□□□ -1.12
CCDC38-202ENST00000546386 SPANXCQ9NY87 97 aa8.04□□□□□ -1.12
CCDC38-202ENST00000546386 A0A1B0GV72 72 aa8.03□□□□□ -1.12
CCDC38-202ENST00000546386 CCL18P55774 89 aa8.03□□□□□ -1.12
CCDC38-202ENST00000546386 KIAA0087Q14695 138 aa8.03□□□□□ -1.12
CCDC38-202ENST00000546386 CFAP161Q6P656 301 aa8.03□□□□□ -1.12
CCDC38-202ENST00000546386 Q8NDZ9 215 aa8.03□□□□□ -1.12
CCDC38-202ENST00000546386 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
CCDC38-202ENST00000546386 SPAG11BQ08648 103 aa8.03□□□□□ -1.12
CCDC38-202ENST00000546386 LINC00337Q8N6G1 96 aa8.02□□□□□ -1.13
CCDC38-202ENST00000546386 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
CCDC38-202ENST00000546386 TEX48A0A1B0GUV7 120 aa8.01□□□□□ -1.13
CCDC38-202ENST00000546386 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
CCDC38-202ENST00000546386 C9JAW5 83 aa8.01□□□□□ -1.13
CCDC38-202ENST00000546386 PRR34Q9NV39 138 aa8.01□□□□□ -1.13
CCDC38-202ENST00000546386 TRAV16A0A0A6YYK6 109 aaPredicted RBP8□□□□□ -1.13
CCDC38-202ENST00000546386 TRAV10A0A0B4J240 114 aa8□□□□□ -1.13
CCDC38-202ENST00000546386 NCR3O14931 201 aa8□□□□□ -1.13
CCDC38-202ENST00000546386 A0A0B4J2C4 111 aa7.99□□□□□ -1.13
CCDC38-202ENST00000546386 OCIAD2Q56VL3 154 aa7.99□□□□□ -1.13
CCDC38-202ENST00000546386 HERV-K104P63124 156 aa7.99□□□□□ -1.13
CCDC38-202ENST00000546386 GAGE2EQ4V326 116 aa7.98□□□□□ -1.13
CCDC38-202ENST00000546386 Q8IZM0 81 aa7.98□□□□□ -1.13
CCDC38-202ENST00000546386 GAGE2DQ9UEU5 116 aa7.98□□□□□ -1.13
CCDC38-202ENST00000546386 C1orf43Q9BWL3 253 aa7.97□□□□□ -1.13
CCDC38-202ENST00000546386 ZNF561-AS1K7EIQ3 104 aa7.96□□□□□ -1.13
CCDC38-202ENST00000546386 TIMM17BO60830 172 aa7.96□□□□□ -1.13
CCDC38-202ENST00000546386 FUSP35637 526 aaKnown RBP eCLIP7.96□□□□□ -1.13
CCDC38-202ENST00000546386 KRTAP1-5Q9BYS1 174 aa7.96□□□□□ -1.13
CCDC38-202ENST00000546386 PRO0461Q9UI25 63 aa7.96□□□□□ -1.13
CCDC38-202ENST00000546386 FAM218AQ96MZ4 157 aa7.96□□□□□ -1.14
CCDC38-202ENST00000546386 IBA57-AS1B1ANH7 110 aa7.95□□□□□ -1.14
CCDC38-202ENST00000546386 M0R2N4 97 aa7.95□□□□□ -1.14
CCDC38-202ENST00000546386 Q6ZRU5 148 aa7.95□□□□□ -1.14
CCDC38-202ENST00000546386 CAMK2N2Q96S95 79 aa7.95□□□□□ -1.14
CCDC38-202ENST00000546386 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
CCDC38-202ENST00000546386 IFITM1P13164 125 aa7.95□□□□□ -1.14
CCDC38-202ENST00000546386 LINC01620Q4KN68 170 aa7.94□□□□□ -1.14
CCDC38-202ENST00000546386 C15orf56Q8N910 161 aa7.94□□□□□ -1.14
CCDC38-202ENST00000546386 TRAV8-4A0A0B4J246 113 aa7.94□□□□□ -1.14
CCDC38-202ENST00000546386 SLPIP03973 132 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms