RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 SMR3AQ99954 134 aa10.58□□□□□ -0.72
CNN3-207ENST00000545882 X6R8D5 127 aa10.58□□□□□ -0.72
CNN3-207ENST00000545882 LINC00643Q86TS7 51 aa10.57□□□□□ -0.72
CNN3-207ENST00000545882 IMUPQ9GZP8 106 aa10.57□□□□□ -0.72
CNN3-207ENST00000545882 C11orf68Q9H3H3 251 aaKnown RBP10.57□□□□□ -0.72
CNN3-207ENST00000545882 A0A1B0GUV1 79 aa10.56□□□□□ -0.72
CNN3-207ENST00000545882 H0YGX0 51 aa10.56□□□□□ -0.72
CNN3-207ENST00000545882 ATP5G1P05496 136 aa10.56□□□□□ -0.72
CNN3-207ENST00000545882 XCL1P47992 114 aa10.56□□□□□ -0.72
CNN3-207ENST00000545882 FN1P02751 2386 aaKnown RBP10.56□□□□□ -0.72
CNN3-207ENST00000545882 PAX4O43316 350 aa10.55□□□□□ -0.72
CNN3-207ENST00000545882 INAFM2P0DMQ5 153 aa10.55□□□□□ -0.72
CNN3-207ENST00000545882 C6orf226Q5I0X4 101 aa10.55□□□□□ -0.72
CNN3-207ENST00000545882 LY6G6DO95868 133 aa10.54□□□□□ -0.72
CNN3-207ENST00000545882 SS18Q15532 418 aa10.54□□□□□ -0.72
CNN3-207ENST00000545882 GAGE2AQ6NT46 116 aa10.54□□□□□ -0.72
CNN3-207ENST00000545882 CLPSL2Q6UWE3 100 aa10.54□□□□□ -0.72
CNN3-207ENST00000545882 OBSCN-AS1Q96MR7 158 aa10.54□□□□□ -0.72
CNN3-207ENST00000545882 A0A096LPF7 62 aa10.53□□□□□ -0.72
CNN3-207ENST00000545882 FAM236AA0A1B0GUQ0 79 aa10.53□□□□□ -0.72
CNN3-207ENST00000545882 FAM236BA0A1B0GV22 79 aa10.53□□□□□ -0.72
CNN3-207ENST00000545882 Q8IZM0 81 aa10.53□□□□□ -0.72
CNN3-207ENST00000545882 LINC00482Q8N8I6 264 aa10.53□□□□□ -0.72
CNN3-207ENST00000545882 LECT2O14960 151 aa10.52□□□□□ -0.72
CNN3-207ENST00000545882 DNAL4O96015 105 aa10.52□□□□□ -0.72
CNN3-207ENST00000545882 FASNP49327 2511 aaKnown RBP10.52□□□□□ -0.73
CNN3-207ENST00000545882 OR13C6PQ8NH95 151 aa10.52□□□□□ -0.73
CNN3-207ENST00000545882 PRO0255Q9UI72 69 aa10.52□□□□□ -0.73
CNN3-207ENST00000545882 SPATA3Q8NHX4 192 aa10.51□□□□□ -0.73
CNN3-207ENST00000545882 NANOS2P60321 138 aaKnown RBP10.5□□□□□ -0.73
CNN3-207ENST00000545882 KIAA0087Q14695 138 aa10.5□□□□□ -0.73
CNN3-207ENST00000545882 LINC01561Q8N1V8 128 aa10.5□□□□□ -0.73
CNN3-207ENST00000545882 C14orf132Q9NPU4 83 aa10.5□□□□□ -0.73
CNN3-207ENST00000545882 SLPIP03973 132 aa10.5□□□□□ -0.73
CNN3-207ENST00000545882 HIVEP2P31629 2446 aa10.5□□□□□ -0.73
CNN3-207ENST00000545882 Q8N3U1 123 aa10.49□□□□□ -0.73
CNN3-207ENST00000545882 GCN1Q92616 2671 aaKnown RBP10.49□□□□□ -0.73
CNN3-207ENST00000545882 SMIM9A6NGZ8 99 aa10.48□□□□□ -0.73
CNN3-207ENST00000545882 PRR3P79522 188 aaKnown RBP10.48□□□□□ -0.73
CNN3-207ENST00000545882 KLK5Q9Y337 293 aaPredicted RBP10.48□□□□□ -0.73
CNN3-207ENST00000545882 CXCL5P42830 114 aa10.48□□□□□ -0.73
CNN3-207ENST00000545882 LINC00269Q8N2A0 174 aa10.47□□□□□ -0.73
CNN3-207ENST00000545882 NCR3O14931 201 aa10.46□□□□□ -0.73
CNN3-207ENST00000545882 CD164L2Q6UWJ8 174 aa10.46□□□□□ -0.74
CNN3-207ENST00000545882 LINC00167Q96N53 147 aa10.46□□□□□ -0.74
CNN3-207ENST00000545882 DEFB4AO15263 64 aa10.45□□□□□ -0.74
CNN3-207ENST00000545882 NBEAL2Q6ZNJ1 2754 aa10.45□□□□□ -0.74
CNN3-207ENST00000545882 OTOGQ6ZRI0 2925 aa10.45□□□□□ -0.74
CNN3-207ENST00000545882 LYRM9A8MSI8 78 aa10.45□□□□□ -0.74
CNN3-207ENST00000545882 CHCHD10Q8WYQ3 142 aaPredicted RBP10.45□□□□□ -0.74
CNN3-207ENST00000545882 IGLV10-54A0A075B6I4 117 aa10.44□□□□□ -0.74
CNN3-207ENST00000545882 Q8NDZ9 215 aa10.44□□□□□ -0.74
CNN3-207ENST00000545882 LINC00846Q9NV44 126 aa10.44□□□□□ -0.74
CNN3-207ENST00000545882 NDUFC2O95298 119 aa10.43□□□□□ -0.74
CNN3-207ENST00000545882 C9orf116Q5BN46 136 aaPredicted RBP10.43□□□□□ -0.74
CNN3-207ENST00000545882 ORMDL1Q9P0S3 153 aa10.43□□□□□ -0.74
CNN3-207ENST00000545882 IGHV4-28A0A0C4DH34 117 aa10.43□□□□□ -0.74
CNN3-207ENST00000545882 HIST1H4AP62805 103 aaKnown RBP10.43□□□□□ -0.74
CNN3-207ENST00000545882 REG3AQ06141 175 aa10.43□□□□□ -0.74
CNN3-207ENST00000545882 C3orf56Q8N813 242 aa10.43□□□□□ -0.74
CNN3-207ENST00000545882 INAFM1C9JVW0 142 aa10.42□□□□□ -0.74
CNN3-207ENST00000545882 COX17Q14061 63 aa10.42□□□□□ -0.74
CNN3-207ENST00000545882 DEFB135Q30KP9 77 aa10.42□□□□□ -0.74
CNN3-207ENST00000545882 ANGP03950 147 aaKnown RBP10.41□□□□□ -0.74
CNN3-207ENST00000545882 CFAP161Q6P656 301 aa10.41□□□□□ -0.74
CNN3-207ENST00000545882 Q8N814 137 aa10.41□□□□□ -0.74
CNN3-207ENST00000545882 VWFP04275 2813 aa10.4□□□□□ -0.74
CNN3-207ENST00000545882 Q6JHZ5 121 aa10.4□□□□□ -0.74
CNN3-207ENST00000545882 CELA1Q9UNI1 258 aa10.4□□□□□ -0.74
CNN3-207ENST00000545882 HECTD1Q9ULT8 2610 aa10.39□□□□□ -0.75
CNN3-207ENST00000545882 A0A1B0GX51 115 aa10.39□□□□□ -0.75
CNN3-207ENST00000545882 C3orf22Q8N5N4 141 aa10.39□□□□□ -0.75
CNN3-207ENST00000545882 IGKV3D-7A0A0C4DH55 119 aa10.39□□□□□ -0.75
CNN3-207ENST00000545882 C9orf66Q5T8R8 295 aa10.39□□□□□ -0.75
CNN3-207ENST00000545882 NSD1Q96L73 2696 aaPredicted RBP10.38□□□□□ -0.75
CNN3-207ENST00000545882 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
CNN3-207ENST00000545882 TMEM126AQ9H061 195 aa10.38□□□□□ -0.75
CNN3-207ENST00000545882 CCKP06307 115 aa10.37□□□□□ -0.75
CNN3-207ENST00000545882 DAD1P61803 113 aa10.37□□□□□ -0.75
CNN3-207ENST00000545882 C10orf25Q5T742 122 aa10.37□□□□□ -0.75
CNN3-207ENST00000545882 C6orf223Q8N319 242 aa10.37□□□□□ -0.75
CNN3-207ENST00000545882 UQCRQO14949 82 aa10.37□□□□□ -0.75
CNN3-207ENST00000545882 Q8NAQ8 132 aa10.36□□□□□ -0.75
CNN3-207ENST00000545882 LINC00526Q96FQ7 95 aa10.36□□□□□ -0.75
CNN3-207ENST00000545882 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
CNN3-207ENST00000545882 C6orf99Q4VX62 202 aa10.35□□□□□ -0.75
CNN3-207ENST00000545882 COX7CP15954 63 aa10.34□□□□□ -0.75
CNN3-207ENST00000545882 C9orf153Q5TBE3 101 aa10.34□□□□□ -0.75
CNN3-207ENST00000545882 SMIM20Q8N5G0 67 aa10.34□□□□□ -0.75
CNN3-207ENST00000545882 APOC4P55056 127 aa10.33□□□□□ -0.76
CNN3-207ENST00000545882 A0A087WVE0 104 aa10.33□□□□□ -0.76
CNN3-207ENST00000545882 JMJD7-PLA2G4BH0Y9G9 81 aa10.33□□□□□ -0.76
CNN3-207ENST00000545882 TMEM256-PLSCR3K7ERE1 68 aa10.33□□□□□ -0.76
CNN3-207ENST00000545882 SVIPQ8NHG7 77 aa10.33□□□□□ -0.76
CNN3-207ENST00000545882 SPAG11BQ08648 103 aa10.32□□□□□ -0.76
CNN3-207ENST00000545882 LELP1Q5T871 98 aa10.32□□□□□ -0.76
CNN3-207ENST00000545882 LINC00575Q6W349 94 aa10.32□□□□□ -0.76
CNN3-207ENST00000545882 A0A0J9YWU9 116 aa10.31□□□□□ -0.76
CNN3-207ENST00000545882 ATOX1O00244 68 aa10.31□□□□□ -0.76
CNN3-207ENST00000545882 IGHV4-30-4P0DP06 118 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms