RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 HERVK_113P63121 156 aa10.59□□□□□ -0.71
LIMS2-217ENST00000545738 PMCHL2Q9BQD1 86 aa10.59□□□□□ -0.71
LIMS2-217ENST00000545738 ZNF22P17026 224 aaPredicted RBP10.58□□□□□ -0.72
LIMS2-217ENST00000545738 MALP21145 153 aa10.58□□□□□ -0.72
LIMS2-217ENST00000545738 GEMIN7Q9H840 131 aaKnown RBP10.58□□□□□ -0.72
LIMS2-217ENST00000545738 IGHV1-58A0A0C4DH39 117 aa10.58□□□□□ -0.72
LIMS2-217ENST00000545738 BIRC6Q9NR09 4857 aa10.57□□□□□ -0.72
LIMS2-217ENST00000545738 IGHV3-64A0A075B6Q5 118 aa10.57□□□□□ -0.72
LIMS2-217ENST00000545738 SMIM1B2RUZ4 78 aa10.56□□□□□ -0.72
LIMS2-217ENST00000545738 F8VRH5 84 aa10.56□□□□□ -0.72
LIMS2-217ENST00000545738 SEC11AP67812 179 aa10.56□□□□□ -0.72
LIMS2-217ENST00000545738 KIAA0087Q14695 138 aa10.56□□□□□ -0.72
LIMS2-217ENST00000545738 SYS1-DBNDD2H3BUS1 97 aa10.55□□□□□ -0.72
LIMS2-217ENST00000545738 C3orf79P0CE67 100 aa10.55□□□□□ -0.72
LIMS2-217ENST00000545738 HNRNPA3P51991 378 aaKnown RBP10.55□□□□□ -0.72
LIMS2-217ENST00000545738 IGLV5-52A0A0A0MRZ9 124 aa10.55□□□□□ -0.72
LIMS2-217ENST00000545738 SPINK8P0C7L1 97 aa10.55□□□□□ -0.72
LIMS2-217ENST00000545738 C14orf177Q52M58 125 aa10.55□□□□□ -0.72
LIMS2-217ENST00000545738 KIAA1109Q2LD37 5005 aa10.55□□□□□ -0.72
LIMS2-217ENST00000545738 SPAG11BQ08648 103 aa10.54□□□□□ -0.72
LIMS2-217ENST00000545738 MAP1LC3CQ9BXW4 147 aa10.54□□□□□ -0.72
LIMS2-217ENST00000545738 CNBPP62633 177 aaKnown RBP10.53□□□□□ -0.72
LIMS2-217ENST00000545738 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
LIMS2-217ENST00000545738 KRTAP10-1P60331 282 aa10.53□□□□□ -0.72
LIMS2-217ENST00000545738 C10orf25Q5T742 122 aa10.53□□□□□ -0.72
LIMS2-217ENST00000545738 LINC01561Q8N1V8 128 aa10.53□□□□□ -0.72
LIMS2-217ENST00000545738 STPG4Q8N801 248 aa10.53□□□□□ -0.72
LIMS2-217ENST00000545738 C16orf90A8MZG2 172 aa10.52□□□□□ -0.73
LIMS2-217ENST00000545738 APOMO95445 188 aa10.52□□□□□ -0.73
LIMS2-217ENST00000545738 MTURNQ8N3F0 131 aa10.52□□□□□ -0.73
LIMS2-217ENST00000545738 HSPG2P98160 4391 aa10.51□□□□□ -0.73
LIMS2-217ENST00000545738 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
LIMS2-217ENST00000545738 KRTDAPP60985 99 aa10.51□□□□□ -0.73
LIMS2-217ENST00000545738 TMEM170BQ5T4T1 132 aa10.51□□□□□ -0.73
LIMS2-217ENST00000545738 LINC01545Q5VT33 79 aa10.51□□□□□ -0.73
LIMS2-217ENST00000545738 C2orf82Q6UX34 121 aa10.51□□□□□ -0.73
LIMS2-217ENST00000545738 Q6ZRU5 148 aa10.51□□□□□ -0.73
LIMS2-217ENST00000545738 IGLV5-39A0A0G2JS06 123 aa10.5□□□□□ -0.73
LIMS2-217ENST00000545738 PAM16Q9Y3D7 125 aa10.5□□□□□ -0.73
LIMS2-217ENST00000545738 VAMP3Q15836 100 aa10.5□□□□□ -0.73
LIMS2-217ENST00000545738 C9orf163Q8N9P6 203 aa10.5□□□□□ -0.73
LIMS2-217ENST00000545738 TOMM7Q9P0U1 55 aa10.5□□□□□ -0.73
LIMS2-217ENST00000545738 RYR1P21817 5038 aa10.49□□□□□ -0.73
LIMS2-217ENST00000545738 TMEM223A0PJW6 202 aa10.49□□□□□ -0.73
LIMS2-217ENST00000545738 UNQ6190/PRO20217Q6UXQ8 127 aa10.49□□□□□ -0.73
LIMS2-217ENST00000545738 GCSHP23434 173 aa10.48□□□□□ -0.73
LIMS2-217ENST00000545738 Q8IZM0 81 aa10.48□□□□□ -0.73
LIMS2-217ENST00000545738 DPM2O94777 84 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 IGKCP01834 107 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 SYCNQ0VAF6 134 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 C2orf48Q96LS8 159 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 CAMK2N2Q96S95 79 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 FAM30AQ9NZY2 134 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 H3BRM9 83 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 PANO1I0J062 215 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 PLNP26678 52 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 SPATA45Q537H7 98 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 CARD19Q96LW7 228 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 C6orf48Q9UBA6 75 aa10.47□□□□□ -0.73
LIMS2-217ENST00000545738 SDIM1Q6ZPB5 146 aa10.46□□□□□ -0.74
LIMS2-217ENST00000545738 COX7B2Q8TF08 81 aa10.46□□□□□ -0.74
LIMS2-217ENST00000545738 TSPEAR-AS2P59090 65 aa10.44□□□□□ -0.74
LIMS2-217ENST00000545738 C9orf116Q5BN46 136 aaPredicted RBP10.44□□□□□ -0.74
LIMS2-217ENST00000545738 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.44□□□□□ -0.74
LIMS2-217ENST00000545738 HAMPP81172 84 aa10.44□□□□□ -0.74
LIMS2-217ENST00000545738 C6orf226Q5I0X4 101 aa10.44□□□□□ -0.74
LIMS2-217ENST00000545738 NDUFA1O15239 70 aa10.43□□□□□ -0.74
LIMS2-217ENST00000545738 PRSS2P07478 247 aa10.43□□□□□ -0.74
LIMS2-217ENST00000545738 ATOH7Q8N100 152 aa10.43□□□□□ -0.74
LIMS2-217ENST00000545738 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.43□□□□□ -0.74
LIMS2-217ENST00000545738 FAT1Q14517 4588 aa10.42□□□□□ -0.74
LIMS2-217ENST00000545738 CHTF8P0CG12 524 aa10.42□□□□□ -0.74
LIMS2-217ENST00000545738 Q6ZSA8 131 aa10.42□□□□□ -0.74
LIMS2-217ENST00000545738 A0A096LNI7 61 aa10.4□□□□□ -0.74
LIMS2-217ENST00000545738 CKS1BP61024 79 aa10.4□□□□□ -0.74
LIMS2-217ENST00000545738 GTF2H5Q6ZYL4 71 aa10.4□□□□□ -0.74
LIMS2-217ENST00000545738 ZNF625Q96I27 306 aaPredicted RBP10.4□□□□□ -0.74
LIMS2-217ENST00000545738 IGKV2D-26A0A0A0MRZ7 120 aa10.38□□□□□ -0.75
LIMS2-217ENST00000545738 F8WDY8 70 aa10.38□□□□□ -0.75
LIMS2-217ENST00000545738 XGP55808 180 aa10.38□□□□□ -0.75
LIMS2-217ENST00000545738 Q6ZRP5 223 aa10.38□□□□□ -0.75
LIMS2-217ENST00000545738 TRBV30A0A0K0K1B3 111 aa10.38□□□□□ -0.75
LIMS2-217ENST00000545738 HINT1P49773 126 aaPredicted RBP10.38□□□□□ -0.75
LIMS2-217ENST00000545738 KRTAP17-1Q9BYP8 105 aa10.38□□□□□ -0.75
LIMS2-217ENST00000545738 IGKV2-24A0A0C4DH68 120 aa10.37□□□□□ -0.75
LIMS2-217ENST00000545738 CXCL5P42830 114 aa10.37□□□□□ -0.75
LIMS2-217ENST00000545738 E9PLD3 99 aa10.36□□□□□ -0.75
LIMS2-217ENST00000545738 LEPROTO15243 131 aa10.36□□□□□ -0.75
LIMS2-217ENST00000545738 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
LIMS2-217ENST00000545738 TTTY13Q9BZ97 58 aa10.36□□□□□ -0.75
LIMS2-217ENST00000545738 J3QQQ9 107 aa10.35□□□□□ -0.75
LIMS2-217ENST00000545738 TAX1BP3O14907 124 aa10.35□□□□□ -0.75
LIMS2-217ENST00000545738 TLX1NBP0CAT3 122 aa10.35□□□□□ -0.75
LIMS2-217ENST00000545738 RPL18AQ02543 176 aaKnown RBP10.35□□□□□ -0.75
LIMS2-217ENST00000545738 SPACA4Q8TDM5 124 aa10.35□□□□□ -0.75
LIMS2-217ENST00000545738 SIGMAR1Q99720 223 aa10.35□□□□□ -0.75
LIMS2-217ENST00000545738 VPS13BQ7Z7G8 4022 aa10.35□□□□□ -0.75
LIMS2-217ENST00000545738 HERC2O95714 4834 aa10.35□□□□□ -0.75
LIMS2-217ENST00000545738 LOC107984640A0A0U1RRK4 108 aa10.34□□□□□ -0.75
LIMS2-217ENST00000545738 GAGE2BQ13066 116 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms