RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-221	ENST00000545367	KRTAP7-1	Q8IUC3	87 aa		4.97	□□□□□ -1.61
NPIPB4-221	ENST00000545367	GATD1	Q8NB37	220 aa		4.97	□□□□□ -1.61
NPIPB4-221	ENST00000545367	C2orf48	Q96LS8	159 aa		4.97	□□□□□ -1.61
NPIPB4-221	ENST00000545367	RPS10P5	Q9NQ39	176 aa		4.97	□□□□□ -1.61
NPIPB4-221	ENST00000545367	SMCO4	Q9NRQ5	59 aa		4.97	□□□□□ -1.61
NPIPB4-221	ENST00000545367		A8MWL6	223 aa		4.96	□□□□□ -1.62
NPIPB4-221	ENST00000545367	RNASE13	Q5GAN3	156 aa	Known RBP	4.96	□□□□□ -1.62
NPIPB4-221	ENST00000545367	LINC00173	Q6ZV60	143 aa		4.96	□□□□□ -1.62
NPIPB4-221	ENST00000545367	MRAP2	Q96G30	205 aa		4.96	□□□□□ -1.62
NPIPB4-221	ENST00000545367	SDHAF1	A6NFY7	115 aa		4.95	□□□□□ -1.62
NPIPB4-221	ENST00000545367		K7EN84	100 aa		4.95	□□□□□ -1.62
NPIPB4-221	ENST00000545367	GATC	O43716	136 aa	Known RBP	4.95	□□□□□ -1.62
NPIPB4-221	ENST00000545367	ZNF861P	O60384	105 aa		4.95	□□□□□ -1.62
NPIPB4-221	ENST00000545367	ESD	P10768	282 aa		4.95	□□□□□ -1.62
NPIPB4-221	ENST00000545367	LYZL1	Q6UWQ5	148 aa		4.95	□□□□□ -1.62
NPIPB4-221	ENST00000545367	C5orf38	Q86SI9	138 aa		4.95	□□□□□ -1.62
NPIPB4-221	ENST00000545367	NRAC	Q8N912	160 aa		4.95	□□□□□ -1.62
NPIPB4-221	ENST00000545367	TRAV13-1	A0A0B4J241	112 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367		A0A1B0GW15	77 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	S100A8	P05109	93 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	CTRL	P40313	264 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	COX19	Q49B96	90 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	LINC00304	Q8N9R0	145 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	ORAOV1	Q8WV07	137 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	BORCS7	Q96B45	105 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	KRTAP4-1	Q9BYQ7	146 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	RNASE7	Q9H1E1	156 aa	Known RBP	4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	CDC42SE2	Q9NRR3	84 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	MRPL35	Q9NZE8	188 aa	Known RBP	4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	NAT8B	Q9UHF3	227 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367		V9GYV3	84 aa		4.94	□□□□□ -1.62
NPIPB4-221	ENST00000545367	SMIM27	A0A1W2PRY6	76 aa		4.93	□□□□□ -1.62
NPIPB4-221	ENST00000545367		F2Z2F3	143 aa		4.93	□□□□□ -1.62
NPIPB4-221	ENST00000545367		I3L3M4	83 aa		4.93	□□□□□ -1.62
NPIPB4-221	ENST00000545367	NDUFA1	O15239	70 aa		4.93	□□□□□ -1.62
NPIPB4-221	ENST00000545367	PMCH	P20382	165 aa		4.93	□□□□□ -1.62
NPIPB4-221	ENST00000545367	FOXA3	P55318	350 aa	Predicted RBP	4.93	□□□□□ -1.62
NPIPB4-221	ENST00000545367	ATP5L2	Q7Z4Y8	100 aa		4.93	□□□□□ -1.62
NPIPB4-221	ENST00000545367	OR10D4P	Q8NGN7	298 aa		4.93	□□□□□ -1.62
NPIPB4-221	ENST00000545367	ANAPC11	Q9NYG5	84 aa		4.93	□□□□□ -1.62
NPIPB4-221	ENST00000545367	C6orf48	Q9UBA6	75 aa		4.93	□□□□□ -1.62
NPIPB4-221	ENST00000545367	TRBV24-1	A0A075B6N3	115 aa		4.92	□□□□□ -1.62
NPIPB4-221	ENST00000545367	C1orf196	B1AJZ1	125 aa		4.92	□□□□□ -1.62
NPIPB4-221	ENST00000545367	TLX1NB	P0CAT3	122 aa		4.92	□□□□□ -1.62
NPIPB4-221	ENST00000545367	KRTAP13-2	Q52LG2	175 aa		4.92	□□□□□ -1.62
NPIPB4-221	ENST00000545367		Q6ZUT4	128 aa		4.92	□□□□□ -1.62
NPIPB4-221	ENST00000545367	MRPL52	Q86TS9	123 aa	Known RBP	4.92	□□□□□ -1.62
NPIPB4-221	ENST00000545367	PPDPF	Q9H3Y8	114 aa		4.92	□□□□□ -1.62
NPIPB4-221	ENST00000545367	HIGD1C	A8MV81	97 aa		4.91	□□□□□ -1.62
NPIPB4-221	ENST00000545367	ASB16-AS1	Q495Z4	193 aa		4.91	□□□□□ -1.62
NPIPB4-221	ENST00000545367	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.91	□□□□□ -1.62
NPIPB4-221	ENST00000545367	CNFN	Q9BYD5	112 aa		4.91	□□□□□ -1.62
NPIPB4-221	ENST00000545367		A0A1B0GUT8	65 aa		4.9	□□□□□ -1.63
NPIPB4-221	ENST00000545367	NUPR1	O60356	82 aa		4.9	□□□□□ -1.63
NPIPB4-221	ENST00000545367	RPL28	P46779	137 aa	Known RBP	4.9	□□□□□ -1.63
NPIPB4-221	ENST00000545367	C9orf129	Q5T035	196 aa	Known RBP	4.9	□□□□□ -1.63
NPIPB4-221	ENST00000545367	SMIM15	Q7Z3B0	74 aa		4.9	□□□□□ -1.63
NPIPB4-221	ENST00000545367	CBLN2	Q8IUK8	224 aa		4.9	□□□□□ -1.63
NPIPB4-221	ENST00000545367	FAM218A	Q96MZ4	157 aa		4.9	□□□□□ -1.63
NPIPB4-221	ENST00000545367	HBB	P68871	147 aa		4.89	□□□□□ -1.63
NPIPB4-221	ENST00000545367	GNB1L	Q9BYB4	327 aa		4.89	□□□□□ -1.63
NPIPB4-221	ENST00000545367	GEMIN7	Q9H840	131 aa	Known RBP	4.89	□□□□□ -1.63
NPIPB4-221	ENST00000545367	RAB5A	P20339	215 aa		4.88	□□□□□ -1.63
NPIPB4-221	ENST00000545367	LINC00242	Q5T6M2	205 aa		4.88	□□□□□ -1.63
NPIPB4-221	ENST00000545367	YPEL4	Q96NS1	127 aa		4.88	□□□□□ -1.63
NPIPB4-221	ENST00000545367	ST20	Q9HBF5	79 aa		4.88	□□□□□ -1.63
NPIPB4-221	ENST00000545367	UBE2D4	Q9Y2X8	147 aa		4.88	□□□□□ -1.63
NPIPB4-221	ENST00000545367	TRBV6-5	A0A0K0K1A5	114 aa		4.87	□□□□□ -1.63
NPIPB4-221	ENST00000545367	COLCA2	A8K830	154 aa		4.87	□□□□□ -1.63
NPIPB4-221	ENST00000545367	BCE1	O60756	84 aa		4.87	□□□□□ -1.63
NPIPB4-221	ENST00000545367	SCO1	O75880	301 aa		4.87	□□□□□ -1.63
NPIPB4-221	ENST00000545367	FCER1G	P30273	86 aa		4.87	□□□□□ -1.63
NPIPB4-221	ENST00000545367	MT1H	P80294	61 aa		4.87	□□□□□ -1.63
NPIPB4-221	ENST00000545367	KRTAP13-3	Q3SY46	172 aa		4.87	□□□□□ -1.63
NPIPB4-221	ENST00000545367	LINC00337	Q8N6G1	96 aa		4.87	□□□□□ -1.63
NPIPB4-221	ENST00000545367	CSDC2	Q9Y534	153 aa	Known RBP	4.87	□□□□□ -1.63
NPIPB4-221	ENST00000545367	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.86	□□□□□ -1.63
NPIPB4-221	ENST00000545367		A0A1B0GXF2	115 aa		4.86	□□□□□ -1.63
NPIPB4-221	ENST00000545367	NDUFC2-KCTD14	E9PQ53	114 aa		4.86	□□□□□ -1.63
NPIPB4-221	ENST00000545367	CFC1B	P0CG36	223 aa		4.86	□□□□□ -1.63
NPIPB4-221	ENST00000545367	LINC00469	Q8N7U9	141 aa		4.86	□□□□□ -1.63
NPIPB4-221	ENST00000545367	TMEM191A	Q9H0A3	160 aa		4.86	□□□□□ -1.63
NPIPB4-221	ENST00000545367	IGKV2D-26	A0A0A0MRZ7	120 aa		4.85	□□□□□ -1.63
NPIPB4-221	ENST00000545367	PPP1R17	O96001	155 aa		4.85	□□□□□ -1.63
NPIPB4-221	ENST00000545367	PPBP	P02775	128 aa		4.85	□□□□□ -1.63
NPIPB4-221	ENST00000545367	KIAA1644	Q3SXP7	199 aa		4.85	□□□□□ -1.63
NPIPB4-221	ENST00000545367	FAM229B	Q4G0N7	80 aa		4.85	□□□□□ -1.63
NPIPB4-221	ENST00000545367	MRPL54	Q6P161	138 aa	Known RBP	4.85	□□□□□ -1.63
NPIPB4-221	ENST00000545367	C2orf82	Q6UX34	121 aa		4.85	□□□□□ -1.63
NPIPB4-221	ENST00000545367	LAMTOR2	Q9Y2Q5	125 aa		4.85	□□□□□ -1.63
NPIPB4-221	ENST00000545367	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.84	□□□□□ -1.63
NPIPB4-221	ENST00000545367	TRBV30	A0A0K0K1B3	111 aa		4.84	□□□□□ -1.63
NPIPB4-221	ENST00000545367	TRBV27	A0A0K0K1C4	114 aa		4.84	□□□□□ -1.63
NPIPB4-221	ENST00000545367	RAB5B	P61020	215 aa		4.84	□□□□□ -1.63
NPIPB4-221	ENST00000545367	SMAGP	Q0VAQ4	97 aa		4.84	□□□□□ -1.63
NPIPB4-221	ENST00000545367	FP248	Q71RG6	208 aa	Predicted RBP	4.84	□□□□□ -1.63
NPIPB4-221	ENST00000545367	PACRG	Q96M98	296 aa	Predicted RBP	4.84	□□□□□ -1.63
NPIPB4-221	ENST00000545367	XAGE1A	Q9HD64	81 aa		4.84	□□□□□ -1.63
NPIPB4-221	ENST00000545367	C22orf24	Q9Y442	160 aa		4.84	□□□□□ -1.63
NPIPB4-221	ENST00000545367	TRAPPC1	Q9Y5R8	145 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms