RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 CIRBPQ14011 172 aaKnown RBP9.12□□□□□ -0.95
SCARB1-209ENST00000545305 C2orf82Q6UX34 121 aa9.12□□□□□ -0.95
SCARB1-209ENST00000545305 Q6ZR54 194 aa9.12□□□□□ -0.95
SCARB1-209ENST00000545305 LINC00587B1AMM8 73 aa9.11□□□□□ -0.95
SCARB1-209ENST00000545305 F8WDY8 70 aa9.11□□□□□ -0.95
SCARB1-209ENST00000545305 TIMM17BO60830 172 aa9.11□□□□□ -0.95
SCARB1-209ENST00000545305 CTAG1AP78358 180 aa9.11□□□□□ -0.95
SCARB1-209ENST00000545305 C6orf223Q8N319 242 aa9.11□□□□□ -0.95
SCARB1-209ENST00000545305 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
SCARB1-209ENST00000545305 C2orf48Q96LS8 159 aa9.11□□□□□ -0.95
SCARB1-209ENST00000545305 CAMK2N2Q96S95 79 aa9.11□□□□□ -0.95
SCARB1-209ENST00000545305 DNAH1Q9P2D7 4330 aa9.11□□□□□ -0.95
SCARB1-209ENST00000545305 HSD52Q0P140 79 aa9.1□□□□□ -0.95
SCARB1-209ENST00000545305 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
SCARB1-209ENST00000545305 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
SCARB1-209ENST00000545305 HIST1H4GQ99525 98 aa9.1□□□□□ -0.95
SCARB1-209ENST00000545305 LYSTQ99698 3801 aa9.1□□□□□ -0.95
SCARB1-209ENST00000545305 SPANXB1Q9NS25 103 aaPredicted RBP9.1□□□□□ -0.95
SCARB1-209ENST00000545305 LECT2O14960 151 aa9.09□□□□□ -0.95
SCARB1-209ENST00000545305 SRSF9Q13242 221 aaKnown RBP eCLIP9.09□□□□□ -0.95
SCARB1-209ENST00000545305 TAL2Q16559 108 aa9.09□□□□□ -0.95
SCARB1-209ENST00000545305 C1orf134Q5TEV5 83 aa9.09□□□□□ -0.95
SCARB1-209ENST00000545305 M0R143 59 aa9.08□□□□□ -0.96
SCARB1-209ENST00000545305 UNQ6190/PRO20217Q6UXQ8 127 aa9.08□□□□□ -0.96
SCARB1-209ENST00000545305 Q6ZRN7 208 aaPredicted RBP9.08□□□□□ -0.96
SCARB1-209ENST00000545305 ERG28Q9UKR5 140 aa9.08□□□□□ -0.96
SCARB1-209ENST00000545305 DNAH6Q9C0G6 4158 aa9.07□□□□□ -0.96
SCARB1-209ENST00000545305 SMIM13P0DJ93 91 aa9.07□□□□□ -0.96
SCARB1-209ENST00000545305 LINC00158P58513 81 aa9.07□□□□□ -0.96
SCARB1-209ENST00000545305 SYCNQ0VAF6 134 aa9.07□□□□□ -0.96
SCARB1-209ENST00000545305 Q6ZVH6 145 aa9.07□□□□□ -0.96
SCARB1-209ENST00000545305 SPANXDQ9BXN6 97 aa9.07□□□□□ -0.96
SCARB1-209ENST00000545305 SPANXCQ9NY87 97 aa9.07□□□□□ -0.96
SCARB1-209ENST00000545305 TRBV30A0A0K0K1B3 111 aa9.06□□□□□ -0.96
SCARB1-209ENST00000545305 A0A0U1RRA0 63 aa9.06□□□□□ -0.96
SCARB1-209ENST00000545305 GCSHP23434 173 aa9.06□□□□□ -0.96
SCARB1-209ENST00000545305 PFN2P35080 140 aa9.06□□□□□ -0.96
SCARB1-209ENST00000545305 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
SCARB1-209ENST00000545305 LITAFQ99732 161 aa9.06□□□□□ -0.96
SCARB1-209ENST00000545305 HINT1P49773 126 aaPredicted RBP9.05□□□□□ -0.96
SCARB1-209ENST00000545305 COX17Q14061 63 aa9.05□□□□□ -0.96
SCARB1-209ENST00000545305 C10orf25Q5T742 122 aa9.05□□□□□ -0.96
SCARB1-209ENST00000545305 Q6ZRU5 148 aa9.05□□□□□ -0.96
SCARB1-209ENST00000545305 CARD19Q96LW7 228 aa9.05□□□□□ -0.96
SCARB1-209ENST00000545305 LCE6AA0A183 80 aa9.04□□□□□ -0.96
SCARB1-209ENST00000545305 WFDC2Q14508 124 aa9.04□□□□□ -0.96
SCARB1-209ENST00000545305 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
SCARB1-209ENST00000545305 CEND1Q8N111 149 aa9.04□□□□□ -0.96
SCARB1-209ENST00000545305 C6orf48Q9UBA6 75 aa9.04□□□□□ -0.96
SCARB1-209ENST00000545305 IFITM1P13164 125 aa9.03□□□□□ -0.96
SCARB1-209ENST00000545305 PTTG1IPP53801 180 aa9.03□□□□□ -0.96
SCARB1-209ENST00000545305 BATFQ16520 125 aa9.03□□□□□ -0.96
SCARB1-209ENST00000545305 MIR7-3HGQ8N6C7 128 aa9.03□□□□□ -0.96
SCARB1-209ENST00000545305 DAND5Q8N907 189 aa9.03□□□□□ -0.96
SCARB1-209ENST00000545305 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.02□□□□□ -0.97
SCARB1-209ENST00000545305 TMEM238LA0A1B0GVL6 79 aa9.02□□□□□ -0.97
SCARB1-209ENST00000545305 LRCOL1A6NCL2 159 aa9.02□□□□□ -0.97
SCARB1-209ENST00000545305 A6NJY4 79 aa9.02□□□□□ -0.97
SCARB1-209ENST00000545305 RPL24P83731 157 aaKnown RBP9.02□□□□□ -0.97
SCARB1-209ENST00000545305 RNF151Q2KHN1 245 aa9.02□□□□□ -0.97
SCARB1-209ENST00000545305 C9orf116Q5BN46 136 aaPredicted RBP9.02□□□□□ -0.97
SCARB1-209ENST00000545305 BVES-AS1Q5T3Y7 98 aa9.02□□□□□ -0.97
SCARB1-209ENST00000545305 NPC2P61916 151 aa9.01□□□□□ -0.97
SCARB1-209ENST00000545305 MUSTN1Q8IVN3 82 aa9.01□□□□□ -0.97
SCARB1-209ENST00000545305 CNBPP62633 177 aaKnown RBP9□□□□□ -0.97
SCARB1-209ENST00000545305 LINC00308Q8TCZ7 52 aa9□□□□□ -0.97
SCARB1-209ENST00000545305 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.99□□□□□ -0.97
SCARB1-209ENST00000545305 A0A087WTM6 91 aa8.99□□□□□ -0.97
SCARB1-209ENST00000545305 A6NDN8 102 aa8.99□□□□□ -0.97
SCARB1-209ENST00000545305 EREGO14944 169 aa8.99□□□□□ -0.97
SCARB1-209ENST00000545305 FXYD2P54710 66 aa8.99□□□□□ -0.97
SCARB1-209ENST00000545305 SNHG12Q9BXW3 62 aa8.99□□□□□ -0.97
SCARB1-209ENST00000545305 NDUFC2-KCTD14E9PQ53 114 aa8.98□□□□□ -0.97
SCARB1-209ENST00000545305 Q8N814 137 aa8.98□□□□□ -0.97
SCARB1-209ENST00000545305 PPDPFQ9H3Y8 114 aa8.98□□□□□ -0.97
SCARB1-209ENST00000545305 SLPIP03973 132 aa8.97□□□□□ -0.97
SCARB1-209ENST00000545305 PKIGQ9Y2B9 76 aa8.97□□□□□ -0.97
SCARB1-209ENST00000545305 LOC107984640A0A0U1RRK4 108 aa8.96□□□□□ -0.98
SCARB1-209ENST00000545305 A4D1N5 150 aa8.96□□□□□ -0.98
SCARB1-209ENST00000545305 RPL18AQ02543 176 aaKnown RBP8.96□□□□□ -0.98
SCARB1-209ENST00000545305 SND1-IT1Q9HBX3 110 aa8.96□□□□□ -0.98
SCARB1-209ENST00000545305 NHP2Q9NX24 153 aaKnown RBP8.96□□□□□ -0.98
SCARB1-209ENST00000545305 TLX1NBP0CAT3 122 aa8.95□□□□□ -0.98
SCARB1-209ENST00000545305 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
SCARB1-209ENST00000545305 DNAH10Q8IVF4 4471 aa8.94□□□□□ -0.98
SCARB1-209ENST00000545305 GAGE2EQ4V326 116 aa8.94□□□□□ -0.98
SCARB1-209ENST00000545305 COL5A1-AS1Q5SY13 56 aa8.94□□□□□ -0.98
SCARB1-209ENST00000545305 GAGE2DQ9UEU5 116 aa8.94□□□□□ -0.98
SCARB1-209ENST00000545305 KMT2AQ03164 3969 aa8.94□□□□□ -0.98
SCARB1-209ENST00000545305 LOC107984156A0A0G2JMH3 177 aa8.93□□□□□ -0.98
SCARB1-209ENST00000545305 RTL8CO15255 209 aa8.93□□□□□ -0.98
SCARB1-209ENST00000545305 EIF4EBP3O60516 100 aaPredicted RBP8.93□□□□□ -0.98
SCARB1-209ENST00000545305 ARL17AQ8IVW1 177 aa8.93□□□□□ -0.98
SCARB1-209ENST00000545305 RAB37Q96AX2 223 aa8.93□□□□□ -0.98
SCARB1-209ENST00000545305 TNP2Q05952 138 aa8.92□□□□□ -0.98
SCARB1-209ENST00000545305 Q6ZRP5 223 aa8.92□□□□□ -0.98
SCARB1-209ENST00000545305 XAGE1AQ9HD64 81 aa8.92□□□□□ -0.98
SCARB1-209ENST00000545305 A0A0B4J2C4 111 aa8.91□□□□□ -0.98
SCARB1-209ENST00000545305 GAGE2BQ13066 116 aa8.91□□□□□ -0.98
SCARB1-209ENST00000545305 C9orf163Q8N9P6 203 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms