RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 LOC110117498A0A087WWA1 95 aa6.11□□□□□ -1.43
ATXN3-216ENST00000545170 USF3Q68DE3 2245 aa6.11□□□□□ -1.43
ATXN3-216ENST00000545170 PKDREJQ9NTG1 2253 aa6.11□□□□□ -1.43
ATXN3-216ENST00000545170 IGFL2Q6UWQ7 119 aa6.1□□□□□ -1.43
ATXN3-216ENST00000545170 C19orf84I3L1E1 186 aa6.1□□□□□ -1.43
ATXN3-216ENST00000545170 Q6ZSN1 163 aa6.1□□□□□ -1.43
ATXN3-216ENST00000545170 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
ATXN3-216ENST00000545170 AGRNO00468 2067 aa6.1□□□□□ -1.43
ATXN3-216ENST00000545170 PRRC2AP48634 2157 aaKnown RBP6.09□□□□□ -1.43
ATXN3-216ENST00000545170 ERC2-IT1O76042 136 aa6.09□□□□□ -1.43
ATXN3-216ENST00000545170 ADORA2A-AS1P86434 159 aa6.09□□□□□ -1.43
ATXN3-216ENST00000545170 C11orf72Q8NBR9 251 aa6.09□□□□□ -1.43
ATXN3-216ENST00000545170 Q6YL49 198 aa6.09□□□□□ -1.44
ATXN3-216ENST00000545170 LINC01006Q8NI28 216 aa6.09□□□□□ -1.44
ATXN3-216ENST00000545170 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
ATXN3-216ENST00000545170 COX8CQ7Z4L0 72 aa6.08□□□□□ -1.44
ATXN3-216ENST00000545170 CEP290O15078 2479 aa6.08□□□□□ -1.44
ATXN3-216ENST00000545170 DAZAP2Q15038 168 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-216ENST00000545170 C18orf65Q6ZTR6 163 aa6.08□□□□□ -1.44
ATXN3-216ENST00000545170 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
ATXN3-216ENST00000545170 PLCE1Q9P212 2302 aa6.07□□□□□ -1.44
ATXN3-216ENST00000545170 UQCR11O14957 56 aa6.07□□□□□ -1.44
ATXN3-216ENST00000545170 SORL1Q92673 2214 aa6.07□□□□□ -1.44
ATXN3-216ENST00000545170 M0R2N4 97 aa6.07□□□□□ -1.44
ATXN3-216ENST00000545170 LMO4P61968 165 aa6.06□□□□□ -1.44
ATXN3-216ENST00000545170 RPL37AP61513 92 aaKnown RBP6.06□□□□□ -1.44
ATXN3-216ENST00000545170 IGLV5-39A0A0G2JS06 123 aa6.06□□□□□ -1.44
ATXN3-216ENST00000545170 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
ATXN3-216ENST00000545170 TNCP24821 2201 aa6.06□□□□□ -1.44
ATXN3-216ENST00000545170 ROS1P08922 2347 aa6.05□□□□□ -1.44
ATXN3-216ENST00000545170 PRR14LQ5THK1 2151 aa6.05□□□□□ -1.44
ATXN3-216ENST00000545170 H7BZZ5 65 aa6.05□□□□□ -1.44
ATXN3-216ENST00000545170 ABCA4P78363 2273 aa6.05□□□□□ -1.44
ATXN3-216ENST00000545170 WISP2O76076 250 aa6.05□□□□□ -1.44
ATXN3-216ENST00000545170 KLKP1Q107X0 134 aa6.05□□□□□ -1.44
ATXN3-216ENST00000545170 LINC01556Q5JQF7 62 aa6.05□□□□□ -1.44
ATXN3-216ENST00000545170 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
ATXN3-216ENST00000545170 NOTCH3Q9UM47 2321 aa6.04□□□□□ -1.44
ATXN3-216ENST00000545170 COL6A6A6NMZ7 2263 aa6.03□□□□□ -1.44
ATXN3-216ENST00000545170 TRIOBPQ9H2D6 2365 aa6.03□□□□□ -1.44
ATXN3-216ENST00000545170 Q6ZRU5 148 aa6.03□□□□□ -1.44
ATXN3-216ENST00000545170 A0A1B0GW54 56 aa6.02□□□□□ -1.45
ATXN3-216ENST00000545170 NOTCH4Q99466 2003 aa6.02□□□□□ -1.45
ATXN3-216ENST00000545170 IGLV1-40P01703 118 aa6.02□□□□□ -1.45
ATXN3-216ENST00000545170 ELOF1P60002 83 aaKnown RBP6.02□□□□□ -1.45
ATXN3-216ENST00000545170 PLA2G2CQ5R387 149 aa6.01□□□□□ -1.45
ATXN3-216ENST00000545170 A0A1B0GUV1 79 aa6.01□□□□□ -1.45
ATXN3-216ENST00000545170 C22orf24Q9Y442 160 aa6.01□□□□□ -1.45
ATXN3-216ENST00000545170 TRBV7-4A0A0J9YYF1 115 aa6□□□□□ -1.45
ATXN3-216ENST00000545170 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
ATXN3-216ENST00000545170 CDSNQ15517 529 aa6□□□□□ -1.45
ATXN3-216ENST00000545170 K7EQZ3 153 aa6□□□□□ -1.45
ATXN3-216ENST00000545170 LINC00476Q8WZB0 136 aa6□□□□□ -1.45
ATXN3-216ENST00000545170 CACNA1BQ00975 2339 aa6□□□□□ -1.45
ATXN3-216ENST00000545170 Q8NBF4 154 aa5.99□□□□□ -1.45
ATXN3-216ENST00000545170 KIF25-AS1Q9Y6Z4 181 aa5.99□□□□□ -1.45
ATXN3-216ENST00000545170 APLNQ9ULZ1 77 aa5.98□□□□□ -1.45
ATXN3-216ENST00000545170 DSCAMO60469 2012 aa5.98□□□□□ -1.45
ATXN3-216ENST00000545170 RAI1Q7Z5J4 1906 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-216ENST00000545170 PIP4P1Q86T03 277 aa5.97□□□□□ -1.45
ATXN3-216ENST00000545170 SPTBN2O15020 2390 aa5.97□□□□□ -1.45
ATXN3-216ENST00000545170 CACNA1EQ15878 2313 aa5.97□□□□□ -1.45
ATXN3-216ENST00000545170 ZDBF2Q9HCK1 2354 aa5.96□□□□□ -1.45
ATXN3-216ENST00000545170 J3QKU1 62 aa5.96□□□□□ -1.45
ATXN3-216ENST00000545170 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.96□□□□□ -1.454e-12■■■□□ 18.3
ATXN3-216ENST00000545170 SPTA1P02549 2419 aa5.96□□□□□ -1.46
ATXN3-216ENST00000545170 PTPRSQ13332 1948 aa5.96□□□□□ -1.46
ATXN3-216ENST00000545170 IGLV5-45A0A087WSX0 123 aa5.96□□□□□ -1.46
ATXN3-216ENST00000545170 MOBPQ13875 183 aa5.96□□□□□ -1.46
ATXN3-216ENST00000545170 ODF3L2Q3SX64 289 aa5.96□□□□□ -1.46
ATXN3-216ENST00000545170 LINC00313P59037 77 aa5.96□□□□□ -1.46
ATXN3-216ENST00000545170 FBXL19-AS1Q494R0 122 aa5.96□□□□□ -1.46
ATXN3-216ENST00000545170 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
ATXN3-216ENST00000545170 LRP4O75096 1905 aa5.95□□□□□ -1.46
ATXN3-216ENST00000545170 CPAMD8Q8IZJ3 1885 aa5.94□□□□□ -1.46
ATXN3-216ENST00000545170 LITAFQ99732 161 aa5.94□□□□□ -1.46
ATXN3-216ENST00000545170 IGHV3OR16-9A0A0B4J2B5 98 aa5.94□□□□□ -1.46
ATXN3-216ENST00000545170 ST20-AS1Q8NBB2 130 aa5.94□□□□□ -1.46
ATXN3-216ENST00000545170 A8MWP4 228 aa5.94□□□□□ -1.46
ATXN3-216ENST00000545170 LINC00167Q96N53 147 aa5.94□□□□□ -1.46
ATXN3-216ENST00000545170 IGLV5-52A0A0A0MRZ9 124 aa5.93□□□□□ -1.46
ATXN3-216ENST00000545170 SPTAN1Q13813 2472 aaKnown RBP5.93□□□□□ -1.46
ATXN3-216ENST00000545170 Q1T7F1 81 aa5.93□□□□□ -1.46
ATXN3-216ENST00000545170 C11orf71Q6IPW1 123 aa5.93□□□□□ -1.46
ATXN3-216ENST00000545170 A0A1W2PNU3 283 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-216ENST00000545170 LYPD5Q6UWN5 251 aa5.93□□□□□ -1.46
ATXN3-216ENST00000545170 EPM2AB3EWF7 344 aa5.93□□□□□ -1.46
ATXN3-216ENST00000545170 LINC00315P59091 139 aa5.92□□□□□ -1.46
ATXN3-216ENST00000545170 Q5XG85 94 aa5.92□□□□□ -1.46
ATXN3-216ENST00000545170 SPACA4Q8TDM5 124 aa5.92□□□□□ -1.46
ATXN3-216ENST00000545170 Q6ZRX8 168 aa5.92□□□□□ -1.46
ATXN3-216ENST00000545170 TET2Q6N021 2002 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-216ENST00000545170 Q8NA96 180 aa5.91□□□□□ -1.46
ATXN3-216ENST00000545170 PTPRBP23467 1997 aa5.9□□□□□ -1.46
ATXN3-216ENST00000545170 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.46
ATXN3-216ENST00000545170 LY6G6CO95867 125 aa5.9□□□□□ -1.47
ATXN3-216ENST00000545170 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.47
ATXN3-216ENST00000545170 LUZP6Q538Z0 58 aa5.9□□□□□ -1.47
ATXN3-216ENST00000545170 BRI3O95415 125 aa5.89□□□□□ -1.47
ATXN3-216ENST00000545170 ADAMTS20P59510 1910 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 273.1 ms