RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TRBV20OR9-2A0A075B6H5 130 aa5.46□□□□□ -1.54
CHD4-212ENST00000545083 TRAV13-1A0A0B4J241 112 aa5.46□□□□□ -1.54
CHD4-212ENST00000545083 DDTP30046 118 aa5.46□□□□□ -1.54
CHD4-212ENST00000545083 UNQ6190/PRO20217Q6UXQ8 127 aa5.46□□□□□ -1.54
CHD4-212ENST00000545083 NUDT10Q8NFP7 164 aa5.46□□□□□ -1.54
CHD4-212ENST00000545083 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
CHD4-212ENST00000545083 NUDT11Q96G61 164 aa5.46□□□□□ -1.54
CHD4-212ENST00000545083 GNG4P50150 75 aa5.45□□□□□ -1.54
CHD4-212ENST00000545083 LINC01551Q86U37 167 aa5.45□□□□□ -1.54
CHD4-212ENST00000545083 ORAOV1Q8WV07 137 aa5.45□□□□□ -1.54
CHD4-212ENST00000545083 TRAPPC1Q9Y5R8 145 aa5.45□□□□□ -1.54
CHD4-212ENST00000545083 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
CHD4-212ENST00000545083 NDUFA1O15239 70 aa5.44□□□□□ -1.54
CHD4-212ENST00000545083 POLR2KP53803 58 aaKnown RBP5.44□□□□□ -1.54
CHD4-212ENST00000545083 LINC01547P58512 204 aaPredicted RBP5.44□□□□□ -1.54
CHD4-212ENST00000545083 KRTAP13-2Q52LG2 175 aa5.44□□□□□ -1.54
CHD4-212ENST00000545083 C9orf129Q5T035 196 aaKnown RBP5.44□□□□□ -1.54
CHD4-212ENST00000545083 Q6ZUT4 128 aa5.44□□□□□ -1.54
CHD4-212ENST00000545083 C2orf88Q9BSF0 95 aa5.44□□□□□ -1.54
CHD4-212ENST00000545083 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
CHD4-212ENST00000545083 ANAPC11Q9NYG5 84 aa5.44□□□□□ -1.54
CHD4-212ENST00000545083 UBE2D4Q9Y2X8 147 aa5.44□□□□□ -1.54
CHD4-212ENST00000545083 CRYGAP11844 174 aa5.43□□□□□ -1.54
CHD4-212ENST00000545083 PDZD11Q5EBL8 140 aa5.43□□□□□ -1.54
CHD4-212ENST00000545083 SMIM12Q96EX1 92 aa5.43□□□□□ -1.54
CHD4-212ENST00000545083 ST20Q9HBF5 79 aa5.43□□□□□ -1.54
CHD4-212ENST00000545083 TRBV27A0A0K0K1C4 114 aa5.42□□□□□ -1.54
CHD4-212ENST00000545083 F8WDY8 70 aa5.42□□□□□ -1.54
CHD4-212ENST00000545083 LINC00173Q6ZV60 143 aa5.42□□□□□ -1.54
CHD4-212ENST00000545083 SMIM15Q7Z3B0 74 aa5.42□□□□□ -1.54
CHD4-212ENST00000545083 C14orf144Q96I85 54 aa5.42□□□□□ -1.54
CHD4-212ENST00000545083 GNB1LQ9BYB4 327 aa5.42□□□□□ -1.54
CHD4-212ENST00000545083 OSTCQ9NRP0 149 aa5.42□□□□□ -1.54
CHD4-212ENST00000545083 CSDC2Q9Y534 153 aaKnown RBP5.42□□□□□ -1.54
CHD4-212ENST00000545083 IGHV3OR16-9A0A0B4J2B5 98 aa5.41□□□□□ -1.54
CHD4-212ENST00000545083 FAM104AQ969W3 186 aa5.41□□□□□ -1.54
CHD4-212ENST00000545083 HSBP1L1C9JCN9 74 aa5.4□□□□□ -1.54
CHD4-212ENST00000545083 K7EN84 100 aa5.4□□□□□ -1.54
CHD4-212ENST00000545083 M0R143 59 aa5.4□□□□□ -1.54
CHD4-212ENST00000545083 KIAA0087Q14695 138 aa5.4□□□□□ -1.54
CHD4-212ENST00000545083 LINC00304Q8N9R0 145 aa5.4□□□□□ -1.54
CHD4-212ENST00000545083 PPDPFQ9H3Y8 114 aa5.4□□□□□ -1.54
CHD4-212ENST00000545083 CBY1Q9Y3M2 126 aa5.4□□□□□ -1.54
CHD4-212ENST00000545083 NDUFC2-KCTD14E9PQ53 114 aa5.39□□□□□ -1.55
CHD4-212ENST00000545083 NUPR1O60356 82 aa5.39□□□□□ -1.55
CHD4-212ENST00000545083 RAB4AP20338 218 aa5.39□□□□□ -1.55
CHD4-212ENST00000545083 C2orf82Q6UX34 121 aa5.39□□□□□ -1.55
CHD4-212ENST00000545083 BAGE3Q86Y29 109 aa5.39□□□□□ -1.55
CHD4-212ENST00000545083 PRO1933Q9H354 126 aa5.39□□□□□ -1.55
CHD4-212ENST00000545083 C22orf24Q9Y442 160 aa5.39□□□□□ -1.55
CHD4-212ENST00000545083 SMKR1H3BMG3 65 aa5.38□□□□□ -1.55
CHD4-212ENST00000545083 VPREB1P12018 145 aa5.38□□□□□ -1.55
CHD4-212ENST00000545083 FCER1GP30273 86 aa5.38□□□□□ -1.55
CHD4-212ENST00000545083 ASB16-AS1Q495Z4 193 aa5.38□□□□□ -1.55
CHD4-212ENST00000545083 LINC00242Q5T6M2 205 aa5.38□□□□□ -1.55
CHD4-212ENST00000545083 FAM231DQ6ZW35 169 aa5.38□□□□□ -1.55
CHD4-212ENST00000545083 TRBV30A0A0K0K1B3 111 aa5.37□□□□□ -1.55
CHD4-212ENST00000545083 VCYO14598 125 aa5.37□□□□□ -1.55
CHD4-212ENST00000545083 TRIAP1O43715 76 aa5.37□□□□□ -1.55
CHD4-212ENST00000545083 RPL28P46779 137 aaKnown RBP5.37□□□□□ -1.55
CHD4-212ENST00000545083 TIMM21Q9BVV7 248 aa5.37□□□□□ -1.55
CHD4-212ENST00000545083 C20orf202A1L168 122 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 BCE1O60756 84 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 RPL39P62891 51 aaKnown RBP5.36□□□□□ -1.55
CHD4-212ENST00000545083 SMAGPQ0VAQ4 97 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 TEX43Q6ZNM6 134 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 ATP5L2Q7Z4Y8 100 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 AMN1Q8IY45 258 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 NRACQ8N912 160 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 MIEN1Q9BRT3 115 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 VAMP8Q9BV40 100 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 TMEM191AQ9H0A3 160 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 NAT8BQ9UHF3 227 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 V9GYV3 84 aa5.36□□□□□ -1.55
CHD4-212ENST00000545083 SMIM27A0A1W2PRY6 76 aa5.35□□□□□ -1.55
CHD4-212ENST00000545083 TCAPO15273 167 aa5.35□□□□□ -1.55
CHD4-212ENST00000545083 PMCHL1Q16048 86 aa5.35□□□□□ -1.55
CHD4-212ENST00000545083 BORCS7Q96B45 105 aa5.35□□□□□ -1.55
CHD4-212ENST00000545083 XAGE1AQ9HD64 81 aa5.35□□□□□ -1.55
CHD4-212ENST00000545083 A0A1B0GV90 55 aa5.34□□□□□ -1.55
CHD4-212ENST00000545083 H0Y8G0 127 aa5.34□□□□□ -1.55
CHD4-212ENST00000545083 SERF1AO75920 110 aa5.34□□□□□ -1.55
CHD4-212ENST00000545083 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.55
CHD4-212ENST00000545083 SUMO2P61956 95 aaKnown RBP5.34□□□□□ -1.55
CHD4-212ENST00000545083 KRTAP13-3Q3SY46 172 aa5.34□□□□□ -1.55
CHD4-212ENST00000545083 TMEM136Q6ZRR5 245 aa5.34□□□□□ -1.55
CHD4-212ENST00000545083 KRTAP13-1Q8IUC0 172 aa5.34□□□□□ -1.55
CHD4-212ENST00000545083 KIR2DL4Q99706 377 aa5.34□□□□□ -1.55
CHD4-212ENST00000545083 A8MWL6 223 aa5.33□□□□□ -1.56
CHD4-212ENST00000545083 FAM229BQ4G0N7 80 aa5.33□□□□□ -1.56
CHD4-212ENST00000545083 MRPL55Q7Z7F7 128 aaKnown RBP5.33□□□□□ -1.56
CHD4-212ENST00000545083 A0A1B0GUT8 65 aa5.32□□□□□ -1.56
CHD4-212ENST00000545083 A0A1B0GW15 77 aa5.32□□□□□ -1.56
CHD4-212ENST00000545083 RPL37AP8A6NKH3 93 aa5.32□□□□□ -1.56
CHD4-212ENST00000545083 HBBP68871 147 aa5.32□□□□□ -1.56
CHD4-212ENST00000545083 MRPS36P82909 103 aaKnown RBP5.32□□□□□ -1.56
CHD4-212ENST00000545083 COL5A1-AS1Q5SY13 56 aa5.32□□□□□ -1.56
CHD4-212ENST00000545083 UQCR10Q9UDW1 63 aa5.32□□□□□ -1.56
CHD4-212ENST00000545083 IGKV2D-26A0A0A0MRZ7 120 aa5.31□□□□□ -1.56
CHD4-212ENST00000545083 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms