RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 CIRBP-AS1Q8TBR5 109 aa8.04□□□□□ -1.12
ACTN1-206ENST00000544964 MAP1LC3CQ9BXW4 147 aa8.04□□□□□ -1.12
ACTN1-206ENST00000544964 MRPL35Q9NZE8 188 aaKnown RBP8.04□□□□□ -1.12
ACTN1-206ENST00000544964 ZNF561-AS1K7EIQ3 104 aa8.03□□□□□ -1.12
ACTN1-206ENST00000544964 ZNF22P17026 224 aaPredicted RBP8.03□□□□□ -1.12
ACTN1-206ENST00000544964 SNRPEP62304 92 aaKnown RBP8.03□□□□□ -1.12
ACTN1-206ENST00000544964 SPAG11BQ08648 103 aa8.03□□□□□ -1.12
ACTN1-206ENST00000544964 ODF1Q14990 250 aa8.03□□□□□ -1.12
ACTN1-206ENST00000544964 HIST3H2BBQ8N257 126 aa8.03□□□□□ -1.12
ACTN1-206ENST00000544964 PACRGQ96M98 296 aaPredicted RBP8.03□□□□□ -1.12
ACTN1-206ENST00000544964 PMCHL2Q9BQD1 86 aa8.03□□□□□ -1.12
ACTN1-206ENST00000544964 PKHD1L1Q86WI1 4243 aa8.03□□□□□ -1.12
ACTN1-206ENST00000544964 F8VRH5 84 aa8.02□□□□□ -1.13
ACTN1-206ENST00000544964 SPINK8P0C7L1 97 aa8.02□□□□□ -1.13
ACTN1-206ENST00000544964 LINC01561Q8N1V8 128 aa8.02□□□□□ -1.13
ACTN1-206ENST00000544964 OR10D4PQ8NGN7 298 aa8.02□□□□□ -1.13
ACTN1-206ENST00000544964 SMIM1B2RUZ4 78 aa8.01□□□□□ -1.13
ACTN1-206ENST00000544964 SYS1-DBNDD2H3BUS1 97 aa8.01□□□□□ -1.13
ACTN1-206ENST00000544964 CNBPP62633 177 aaKnown RBP8.01□□□□□ -1.13
ACTN1-206ENST00000544964 TMEM170BQ5T4T1 132 aa8.01□□□□□ -1.13
ACTN1-206ENST00000544964 TOMM7Q9P0U1 55 aa8.01□□□□□ -1.13
ACTN1-206ENST00000544964 H3BRM9 83 aa8□□□□□ -1.13
ACTN1-206ENST00000544964 C3orf79P0CE67 100 aa8□□□□□ -1.13
ACTN1-206ENST00000544964 S100A2P29034 98 aa8□□□□□ -1.13
ACTN1-206ENST00000544964 KRTDAPP60985 99 aa8□□□□□ -1.13
ACTN1-206ENST00000544964 KIAA0087Q14695 138 aa8□□□□□ -1.13
ACTN1-206ENST00000544964 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.99□□□□□ -1.13
ACTN1-206ENST00000544964 C5orf52A6NGY3 159 aa7.99□□□□□ -1.13
ACTN1-206ENST00000544964 SYCNQ0VAF6 134 aa7.99□□□□□ -1.13
ACTN1-206ENST00000544964 CAMK2N2Q96S95 79 aa7.99□□□□□ -1.13
ACTN1-206ENST00000544964 HIST1H2BLQ99880 126 aa7.99□□□□□ -1.13
ACTN1-206ENST00000544964 DPM2O94777 84 aa7.98□□□□□ -1.13
ACTN1-206ENST00000544964 PRSS2P07478 247 aa7.98□□□□□ -1.13
ACTN1-206ENST00000544964 PET117Q6UWS5 81 aa7.98□□□□□ -1.13
ACTN1-206ENST00000544964 C2orf82Q6UX34 121 aa7.98□□□□□ -1.13
ACTN1-206ENST00000544964 Q6ZRU5 148 aa7.98□□□□□ -1.13
ACTN1-206ENST00000544964 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
ACTN1-206ENST00000544964 C2orf48Q96LS8 159 aa7.98□□□□□ -1.13
ACTN1-206ENST00000544964 CARD19Q96LW7 228 aa7.98□□□□□ -1.13
ACTN1-206ENST00000544964 TMEM223A0PJW6 202 aa7.97□□□□□ -1.13
ACTN1-206ENST00000544964 MAJINQ3KP22 176 aa7.97□□□□□ -1.13
ACTN1-206ENST00000544964 C6orf226Q5I0X4 101 aa7.97□□□□□ -1.13
ACTN1-206ENST00000544964 C10orf25Q5T742 122 aa7.97□□□□□ -1.13
ACTN1-206ENST00000544964 Q8IZM0 81 aa7.97□□□□□ -1.13
ACTN1-206ENST00000544964 COX7B2Q8TF08 81 aa7.97□□□□□ -1.13
ACTN1-206ENST00000544964 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
ACTN1-206ENST00000544964 NDUFA1O15239 70 aa7.96□□□□□ -1.14
ACTN1-206ENST00000544964 IGKCP01834 107 aa7.96□□□□□ -1.14
ACTN1-206ENST00000544964 PLNP26678 52 aa7.96□□□□□ -1.14
ACTN1-206ENST00000544964 HNRNPA3P51991 378 aaKnown RBP7.96□□□□□ -1.14
ACTN1-206ENST00000544964 LINC01545Q5VT33 79 aa7.96□□□□□ -1.14
ACTN1-206ENST00000544964 UNQ6190/PRO20217Q6UXQ8 127 aa7.96□□□□□ -1.14
ACTN1-206ENST00000544964 IGLV5-39A0A0G2JS06 123 aa7.95□□□□□ -1.14
ACTN1-206ENST00000544964 OXTP01178 125 aa7.95□□□□□ -1.14
ACTN1-206ENST00000544964 CKS1BP61024 79 aa7.95□□□□□ -1.14
ACTN1-206ENST00000544964 F8WDY8 70 aa7.94□□□□□ -1.14
ACTN1-206ENST00000544964 PANO1I0J062 215 aa7.94□□□□□ -1.14
ACTN1-206ENST00000544964 SDIM1Q6ZPB5 146 aa7.94□□□□□ -1.14
ACTN1-206ENST00000544964 C6orf48Q9UBA6 75 aa7.94□□□□□ -1.14
ACTN1-206ENST00000544964 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
ACTN1-206ENST00000544964 RPL37AP61513 92 aaKnown RBP7.93□□□□□ -1.14
ACTN1-206ENST00000544964 C20orf202A1L168 122 aa7.92□□□□□ -1.14
ACTN1-206ENST00000544964 C9orf116Q5BN46 136 aaPredicted RBP7.92□□□□□ -1.14
ACTN1-206ENST00000544964 SERTAD4-AS1Q5TG53 156 aa7.92□□□□□ -1.14
ACTN1-206ENST00000544964 CHTF8P0CG12 524 aa7.91□□□□□ -1.14
ACTN1-206ENST00000544964 CXCL5P42830 114 aa7.91□□□□□ -1.14
ACTN1-206ENST00000544964 RNF151Q2KHN1 245 aa7.91□□□□□ -1.14
ACTN1-206ENST00000544964 ATOH7Q8N100 152 aa7.91□□□□□ -1.14
ACTN1-206ENST00000544964 A0A096LNI7 61 aa7.9□□□□□ -1.14
ACTN1-206ENST00000544964 TRBV30A0A0K0K1B3 111 aa7.9□□□□□ -1.14
ACTN1-206ENST00000544964 LOC107984640A0A0U1RRK4 108 aa7.9□□□□□ -1.14
ACTN1-206ENST00000544964 LOC105371267A0A1B0GV96 52 aa7.9□□□□□ -1.14
ACTN1-206ENST00000544964 HERVK_113P61574 105 aa7.9□□□□□ -1.14
ACTN1-206ENST00000544964 RPL18AQ02543 176 aaKnown RBP7.9□□□□□ -1.14
ACTN1-206ENST00000544964 CBY1Q9Y3M2 126 aa7.9□□□□□ -1.14
ACTN1-206ENST00000544964 IGKV2-24A0A0C4DH68 120 aa7.89□□□□□ -1.15
ACTN1-206ENST00000544964 LEPROTO15243 131 aa7.89□□□□□ -1.15
ACTN1-206ENST00000544964 TSPEAR-AS2P59090 65 aa7.89□□□□□ -1.15
ACTN1-206ENST00000544964 GAGE2BQ13066 116 aa7.89□□□□□ -1.15
ACTN1-206ENST00000544964 CIRBPQ14011 172 aaKnown RBP7.89□□□□□ -1.15
ACTN1-206ENST00000544964 STPG4Q8N801 248 aa7.89□□□□□ -1.15
ACTN1-206ENST00000544964 ZNF625Q96I27 306 aaPredicted RBP7.89□□□□□ -1.15
ACTN1-206ENST00000544964 MT1HL1P0DM35 61 aa7.88□□□□□ -1.15
ACTN1-206ENST00000544964 C21orf62-AS1Q17RA5 79 aa7.87□□□□□ -1.15
ACTN1-206ENST00000544964 PLEKHB2Q96CS7 222 aa7.87□□□□□ -1.15
ACTN1-206ENST00000544964 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
ACTN1-206ENST00000544964 PLA2G2DQ9UNK4 145 aa7.87□□□□□ -1.15
ACTN1-206ENST00000544964 PKIGQ9Y2B9 76 aa7.87□□□□□ -1.15
ACTN1-206ENST00000544964 E9PLD3 99 aa7.86□□□□□ -1.15
ACTN1-206ENST00000544964 J3QQQ9 107 aa7.86□□□□□ -1.15
ACTN1-206ENST00000544964 SCGB1D1O95968 90 aa7.86□□□□□ -1.15
ACTN1-206ENST00000544964 TLX1NBP0CAT3 122 aa7.86□□□□□ -1.15
ACTN1-206ENST00000544964 PTTG1IPP53801 180 aa7.86□□□□□ -1.15
ACTN1-206ENST00000544964 S100A12P80511 92 aa7.86□□□□□ -1.15
ACTN1-206ENST00000544964 GAGE2EQ4V326 116 aa7.86□□□□□ -1.15
ACTN1-206ENST00000544964 Q6ZRP5 223 aa7.86□□□□□ -1.15
ACTN1-206ENST00000544964 GAGE2DQ9UEU5 116 aa7.86□□□□□ -1.15
ACTN1-206ENST00000544964 NDUFA12Q9UI09 145 aa7.86□□□□□ -1.15
ACTN1-206ENST00000544964 IGKV2D-26A0A0A0MRZ7 120 aa7.85□□□□□ -1.15
ACTN1-206ENST00000544964 NDUFC2-KCTD14E9PQ53 114 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms