RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MRPL35Q9NZE8 188 aaKnown RBP4.42□□□□□ -1.7
CDCA3-209ENST00000544610 IGLV4-60A0A075B6I1 120 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 IGHV3OR16-9A0A0B4J2B5 98 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 LINC00959A0A1B0GUT2 108 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 IBA57-AS1B1ANH7 110 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 ANGP03950 147 aaKnown RBP4.41□□□□□ -1.7
CDCA3-209ENST00000544610 HERVK_113P61574 105 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 REG3AQ06141 175 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 LINC00242Q5T6M2 205 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 CD164L2Q6UWJ8 174 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 Q6ZRN7 208 aaPredicted RBP4.41□□□□□ -1.7
CDCA3-209ENST00000544610 LINC00518Q8N0U6 118 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 RMI2Q96E14 147 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 TM2D2Q9BX73 214 aa4.41□□□□□ -1.7
CDCA3-209ENST00000544610 GEMIN7Q9H840 131 aaKnown RBP4.41□□□□□ -1.7
CDCA3-209ENST00000544610 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.7
CDCA3-209ENST00000544610 A0A087WZ39 114 aa4.4□□□□□ -1.71
CDCA3-209ENST00000544610 E9PLD3 99 aa4.4□□□□□ -1.71
CDCA3-209ENST00000544610 F8WDY8 70 aa4.4□□□□□ -1.71
CDCA3-209ENST00000544610 DLEU1O43261 78 aa4.4□□□□□ -1.71
CDCA3-209ENST00000544610 CRPP02741 224 aa4.4□□□□□ -1.71
CDCA3-209ENST00000544610 WFDC10BQ8IUB3 73 aa4.4□□□□□ -1.71
CDCA3-209ENST00000544610 CHAC1Q9BUX1 264 aa4.4□□□□□ -1.71
CDCA3-209ENST00000544610 VAMP8Q9BV40 100 aa4.4□□□□□ -1.71
CDCA3-209ENST00000544610 IGLV5-39A0A0G2JS06 123 aa4.39□□□□□ -1.71
CDCA3-209ENST00000544610 INAFM2P0DMQ5 153 aa4.39□□□□□ -1.71
CDCA3-209ENST00000544610 ZNF22P17026 224 aaPredicted RBP4.39□□□□□ -1.71
CDCA3-209ENST00000544610 NMUP48645 174 aa4.39□□□□□ -1.71
CDCA3-209ENST00000544610 XGP55808 180 aa4.39□□□□□ -1.71
CDCA3-209ENST00000544610 ZC2HC1BQ5TFG8 222 aa4.39□□□□□ -1.71
CDCA3-209ENST00000544610 BOD1L2Q8IYS8 172 aa4.39□□□□□ -1.71
CDCA3-209ENST00000544610 LINC00269Q8N2A0 174 aa4.39□□□□□ -1.71
CDCA3-209ENST00000544610 PLEKHB2Q96CS7 222 aa4.39□□□□□ -1.71
CDCA3-209ENST00000544610 C12orf57Q99622 126 aa4.39□□□□□ -1.71
CDCA3-209ENST00000544610 OPRPNQ99935 248 aaPredicted RBP4.39□□□□□ -1.71
CDCA3-209ENST00000544610 PMCHL2Q9BQD1 86 aa4.39□□□□□ -1.71
CDCA3-209ENST00000544610 TRAV13-1A0A0B4J241 112 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 IGHV1-58A0A0C4DH39 117 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 A0A0J9YXV3 536 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 TMEM223A0PJW6 202 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 H0Y8G0 127 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 APOMO95445 188 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 Q5VSD8 79 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 ENHOQ6UWT2 76 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 LINC00469Q8N7U9 141 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 KLK12Q9UKR0 248 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 HMCN2Q8NDA2 5059 aa4.38□□□□□ -1.71
CDCA3-209ENST00000544610 LINC00587B1AMM8 73 aa4.37□□□□□ -1.71
CDCA3-209ENST00000544610 TSTD3H0UI37 97 aa4.37□□□□□ -1.71
CDCA3-209ENST00000544610 COX7A2LO14548 114 aa4.37□□□□□ -1.71
CDCA3-209ENST00000544610 LEPROTO15243 131 aa4.37□□□□□ -1.71
CDCA3-209ENST00000544610 COX8AP10176 69 aa4.37□□□□□ -1.71
CDCA3-209ENST00000544610 FUSP35637 526 aaKnown RBP eCLIP4.37□□□□□ -1.71
CDCA3-209ENST00000544610 CXCL5P42830 114 aa4.37□□□□□ -1.71
CDCA3-209ENST00000544610 TMEM170BQ5T4T1 132 aa4.37□□□□□ -1.71
CDCA3-209ENST00000544610 DEFB104AQ8WTQ1 72 aa4.37□□□□□ -1.71
CDCA3-209ENST00000544610 CHCHD10Q8WYQ3 142 aaPredicted RBP4.37□□□□□ -1.71
CDCA3-209ENST00000544610 CDKN2A-AS1Q9UH64 79 aa4.37□□□□□ -1.71
CDCA3-209ENST00000544610 A0A087WTM6 91 aa4.36□□□□□ -1.71
CDCA3-209ENST00000544610 SMIM1B2RUZ4 78 aa4.36□□□□□ -1.71
CDCA3-209ENST00000544610 HERV-K104P63124 156 aa4.36□□□□□ -1.71
CDCA3-209ENST00000544610 FOXI1Q12951 378 aa4.36□□□□□ -1.71
CDCA3-209ENST00000544610 SPATA45Q537H7 98 aa4.36□□□□□ -1.71
CDCA3-209ENST00000544610 Q8IZM0 81 aa4.36□□□□□ -1.71
CDCA3-209ENST00000544610 UBE2WQ96B02 151 aa4.36□□□□□ -1.71
CDCA3-209ENST00000544610 PPDPFQ9H3Y8 114 aa4.36□□□□□ -1.71
CDCA3-209ENST00000544610 IGHV3-64A0A075B6Q5 118 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 J3QQQ9 107 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 IGHV3-30P01768 117 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 IGHV3-33P01772 117 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 IGHV3-30-3P0DP02 117 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 IGHV3-30-5P0DP03 117 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 COX6A2Q02221 97 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 RNASE13Q5GAN3 156 aaKnown RBP4.35□□□□□ -1.71
CDCA3-209ENST00000544610 KRTAP26-1Q6PEX3 210 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 SLC25A34Q6PIV7 304 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 Q6ZVH6 145 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 STPG4Q8N801 248 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 HIGD1BQ9P298 99 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 UQCR10Q9UDW1 63 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 PAM16Q9Y3D7 125 aa4.35□□□□□ -1.71
CDCA3-209ENST00000544610 GVQW2A0A096LPI5 108 aaPredicted RBP4.34□□□□□ -1.71
CDCA3-209ENST00000544610 A0A0J9YXY3 114 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 MYMXA0A1B0GTQ4 84 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 hDV102S1A0JD36 115 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 NDUFA1O15239 70 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 TIMM17BO60830 172 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 XCL1P47992 114 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 C14orf177Q52M58 125 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 ATOH7Q8N100 152 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 C2orf48Q96LS8 159 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 MIEN1Q9BRT3 115 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 UBR4Q5T4S7 5183 aa4.34□□□□□ -1.71
CDCA3-209ENST00000544610 DMBT1Q9UGM3 2413 aaPredicted RBP4.33□□□□□ -1.72
CDCA3-209ENST00000544610 SMR3BP02814 79 aaPredicted RBP4.33□□□□□ -1.72
CDCA3-209ENST00000544610 LGALS3P17931 250 aaKnown RBP4.33□□□□□ -1.72
CDCA3-209ENST00000544610 COX17Q14061 63 aa4.33□□□□□ -1.72
CDCA3-209ENST00000544610 COPS9Q8WXC6 57 aa4.33□□□□□ -1.72
CDCA3-209ENST00000544610 ZNF625Q96I27 306 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms