RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SNURFQ9Y675 71 aa9.12□□□□□ -0.95
CHD4-211ENST00000544484 PRRC2CQ9Y520 2896 aaKnown RBP9.12□□□□□ -0.95
CHD4-211ENST00000544484 EGFEM1PQ0D2K5 195 aa9.11□□□□□ -0.95
CHD4-211ENST00000544484 PRR4Q16378 134 aa9.1□□□□□ -0.95
CHD4-211ENST00000544484 BEAN1Q3B7T3 259 aa9.1□□□□□ -0.95
CHD4-211ENST00000544484 AMELXQ99217 191 aa9.1□□□□□ -0.95
CHD4-211ENST00000544484 FAM236DA0A1B0GTK5 79 aa9.1□□□□□ -0.95
CHD4-211ENST00000544484 FAM236CP0DP71 79 aa9.1□□□□□ -0.95
CHD4-211ENST00000544484 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.1□□□□□ -0.95
CHD4-211ENST00000544484 BRK1Q8WUW1 75 aa9.1□□□□□ -0.95
CHD4-211ENST00000544484 C3orf22Q8N5N4 141 aa9.1□□□□□ -0.95
CHD4-211ENST00000544484 XGP55808 180 aa9.1□□□□□ -0.95
CHD4-211ENST00000544484 MUC4Q99102 2169 aa9.1□□□□□ -0.95
CHD4-211ENST00000544484 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.95
CHD4-211ENST00000544484 EPG5Q9HCE0 2579 aa9.09□□□□□ -0.95
CHD4-211ENST00000544484 NDUFC2O95298 119 aa9.09□□□□□ -0.95
CHD4-211ENST00000544484 NTM-AS1Q6ZSK4 140 aa9.09□□□□□ -0.95
CHD4-211ENST00000544484 ANKRD17O75179 2603 aaKnown RBP9.09□□□□□ -0.95
CHD4-211ENST00000544484 A0A087WYN8 130 aa9.08□□□□□ -0.96
CHD4-211ENST00000544484 NUPR2A6NF83 97 aa9.07□□□□□ -0.96
CHD4-211ENST00000544484 LINC00474Q9P2X8 69 aa9.07□□□□□ -0.96
CHD4-211ENST00000544484 FAM19A3Q7Z5A8 133 aa9.07□□□□□ -0.96
CHD4-211ENST00000544484 CSDC2Q9Y534 153 aaKnown RBP9.07□□□□□ -0.96
CHD4-211ENST00000544484 Q8N814 137 aa9.07□□□□□ -0.96
CHD4-211ENST00000544484 CEP350Q5VT06 3117 aa9.06□□□□□ -0.96
CHD4-211ENST00000544484 LYPD5Q6UWN5 251 aa9.06□□□□□ -0.96
CHD4-211ENST00000544484 SPTSSBQ8NFR3 76 aa9.06□□□□□ -0.96
CHD4-211ENST00000544484 MUC7Q8TAX7 377 aa9.06□□□□□ -0.96
CHD4-211ENST00000544484 CELA1Q9UNI1 258 aa9.05□□□□□ -0.96
CHD4-211ENST00000544484 RPL28P46779 137 aaKnown RBP9.05□□□□□ -0.96
CHD4-211ENST00000544484 SERP2Q8N6R1 65 aa9.05□□□□□ -0.96
CHD4-211ENST00000544484 FAM30AQ9NZY2 134 aa9.05□□□□□ -0.96
CHD4-211ENST00000544484 A8MTW9 85 aa9.04□□□□□ -0.96
CHD4-211ENST00000544484 REG3GQ6UW15 175 aa9.03□□□□□ -0.96
CHD4-211ENST00000544484 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
CHD4-211ENST00000544484 C10orf25Q5T742 122 aa9.03□□□□□ -0.96
CHD4-211ENST00000544484 KIF25-AS1Q9Y6Z4 181 aa9.03□□□□□ -0.96
CHD4-211ENST00000544484 A0A1B0GUV1 79 aa9.02□□□□□ -0.97
CHD4-211ENST00000544484 NDUFC2-KCTD14E9PQ53 114 aa9.02□□□□□ -0.97
CHD4-211ENST00000544484 SVIPQ8NHG7 77 aa9.02□□□□□ -0.97
CHD4-211ENST00000544484 IMUPQ9GZP8 106 aa9.02□□□□□ -0.97
CHD4-211ENST00000544484 CCDC179H3BU77 68 aa9.02□□□□□ -0.97
CHD4-211ENST00000544484 IGLV5-52A0A0A0MRZ9 124 aa9.02□□□□□ -0.97
CHD4-211ENST00000544484 C11orf72Q8NBR9 251 aa9.02□□□□□ -0.97
CHD4-211ENST00000544484 CIRBP-AS1Q8TBR5 109 aa9.01□□□□□ -0.97
CHD4-211ENST00000544484 A0A087WVE0 104 aa9.01□□□□□ -0.97
CHD4-211ENST00000544484 Q6ZRU5 148 aa9□□□□□ -0.97
CHD4-211ENST00000544484 LINC01556Q5JQF7 62 aa8.99□□□□□ -0.97
CHD4-211ENST00000544484 Q6JHZ5 121 aa8.99□□□□□ -0.97
CHD4-211ENST00000544484 Q8N2B8 174 aa8.99□□□□□ -0.97
CHD4-211ENST00000544484 COX7CP15954 63 aa8.98□□□□□ -0.97
CHD4-211ENST00000544484 FHL3Q13643 280 aa8.97□□□□□ -0.97
CHD4-211ENST00000544484 Q8N9L7 120 aa8.97□□□□□ -0.97
CHD4-211ENST00000544484 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
CHD4-211ENST00000544484 FLNBO75369 2602 aaKnown RBP8.97□□□□□ -0.97
CHD4-211ENST00000544484 Q9UF83 564 aa8.96□□□□□ -0.97
CHD4-211ENST00000544484 PTPRBP23467 1997 aa8.96□□□□□ -0.98
CHD4-211ENST00000544484 LINC00337Q8N6G1 96 aa8.96□□□□□ -0.98
CHD4-211ENST00000544484 DEFB116Q30KQ4 102 aa8.96□□□□□ -0.98
CHD4-211ENST00000544484 LINC00315P59091 139 aa8.96□□□□□ -0.98
CHD4-211ENST00000544484 Q9BRP9 147 aa8.95□□□□□ -0.98
CHD4-211ENST00000544484 C2orf48Q96LS8 159 aa8.95□□□□□ -0.98
CHD4-211ENST00000544484 PRLHP81277 87 aa8.94□□□□□ -0.98
CHD4-211ENST00000544484 ESRGQ1W209 222 aa8.94□□□□□ -0.98
CHD4-211ENST00000544484 C1orf134Q5TEV5 83 aa8.94□□□□□ -0.98
CHD4-211ENST00000544484 LINC00575Q6W349 94 aa8.94□□□□□ -0.98
CHD4-211ENST00000544484 A0A0U1RQV1 116 aa8.94□□□□□ -0.98
CHD4-211ENST00000544484 NDUFC1O43677 76 aa8.94□□□□□ -0.98
CHD4-211ENST00000544484 A0A087WSZ3 146 aa8.93□□□□□ -0.98
CHD4-211ENST00000544484 FAM240AA0A1B0GVK7 77 aa8.93□□□□□ -0.98
CHD4-211ENST00000544484 F8P00451 2351 aa8.93□□□□□ -0.98
CHD4-211ENST00000544484 IGHV6-1A0A0B4J1U7 121 aa8.93□□□□□ -0.98
CHD4-211ENST00000544484 LINC00208Q96KT6 92 aa8.92□□□□□ -0.98
CHD4-211ENST00000544484 FAM19A4Q96LR4 140 aa8.92□□□□□ -0.98
CHD4-211ENST00000544484 LINC01547P58512 204 aaPredicted RBP8.92□□□□□ -0.98
CHD4-211ENST00000544484 Q6Q795 121 aa8.92□□□□□ -0.98
CHD4-211ENST00000544484 RETNLBQ9BQ08 111 aa8.92□□□□□ -0.98
CHD4-211ENST00000544484 COL4A2P08572 1712 aa8.91□□□□□ -0.98
CHD4-211ENST00000544484 IGHV3OR16-9A0A0B4J2B5 98 aa8.91□□□□□ -0.98
CHD4-211ENST00000544484 COL27A1Q8IZC6 1860 aaPredicted RBP8.91□□□□□ -0.98
CHD4-211ENST00000544484 Q8N3U1 123 aa8.9□□□□□ -0.98
CHD4-211ENST00000544484 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
CHD4-211ENST00000544484 IGLV5-39A0A0G2JS06 123 aa8.89□□□□□ -0.99
CHD4-211ENST00000544484 PRYO14603 147 aa8.89□□□□□ -0.99
CHD4-211ENST00000544484 USP24Q9UPU5 2620 aa8.89□□□□□ -0.99
CHD4-211ENST00000544484 PCNTO95613 3336 aa8.88□□□□□ -0.99
CHD4-211ENST00000544484 LINC01561Q8N1V8 128 aa8.88□□□□□ -0.99
CHD4-211ENST00000544484 TRAV7A0A075B6U4 112 aa8.87□□□□□ -0.99
CHD4-211ENST00000544484 LINC00846Q9NV44 126 aa8.87□□□□□ -0.99
CHD4-211ENST00000544484 ATP5EP56381 51 aaPredicted RBP8.87□□□□□ -0.99
CHD4-211ENST00000544484 KRTAP24-1Q3LI83 254 aa8.87□□□□□ -0.99
CHD4-211ENST00000544484 X6R8D5 127 aa8.87□□□□□ -0.99
CHD4-211ENST00000544484 A6NED7 52 aa8.87□□□□□ -0.99
CHD4-211ENST00000544484 SBSPONQ8IVN8 264 aa8.86□□□□□ -0.99
CHD4-211ENST00000544484 F8WDY8 70 aa8.86□□□□□ -0.99
CHD4-211ENST00000544484 MDFIQ99750 246 aa8.86□□□□□ -0.99
CHD4-211ENST00000544484 HECTD1Q9ULT8 2610 aa8.86□□□□□ -0.99
CHD4-211ENST00000544484 K7ERS5 55 aa8.86□□□□□ -0.99
CHD4-211ENST00000544484 Q6ZVQ6 151 aa8.86□□□□□ -0.99
CHD4-211ENST00000544484 PRR15LQ9BU68 103 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms