RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 MAST4O15021 2626 aa12.68□□□□□ -0.38
CCT4-204ENST00000544079 IGLV4-60A0A075B6I1 120 aa12.67□□□□□ -0.38
CCT4-204ENST00000544079 RMI2Q96E14 147 aa12.67□□□□□ -0.38
CCT4-204ENST00000544079 Q6ZVQ6 151 aa12.67□□□□□ -0.38
CCT4-204ENST00000544079 TRAV10A0A0B4J240 114 aa12.66□□□□□ -0.38
CCT4-204ENST00000544079 TRBV7-6A0A0J9YX20 115 aa12.66□□□□□ -0.38
CCT4-204ENST00000544079 COX17Q14061 63 aa12.66□□□□□ -0.38
CCT4-204ENST00000544079 DEFB112Q30KQ8 113 aa12.66□□□□□ -0.38
CCT4-204ENST00000544079 C9orf66Q5T8R8 295 aa12.66□□□□□ -0.38
CCT4-204ENST00000544079 SVEP1Q4LDE5 3571 aa12.66□□□□□ -0.38
CCT4-204ENST00000544079 TRBV6-8A0A0A6YYG3 113 aa12.65□□□□□ -0.38
CCT4-204ENST00000544079 LINC00575Q6W349 94 aa12.65□□□□□ -0.38
CCT4-204ENST00000544079 AVPP01185 164 aa12.65□□□□□ -0.38
CCT4-204ENST00000544079 DYNLRB2Q8TF09 96 aa12.65□□□□□ -0.38
CCT4-204ENST00000544079 SPTAN1Q13813 2472 aaKnown RBP12.65□□□□□ -0.38
CCT4-204ENST00000544079 IGKV3OR2-268A0A0C4DH90 116 aa12.64□□□□□ -0.39
CCT4-204ENST00000544079 LINC00959A0A1B0GUT2 108 aa12.64□□□□□ -0.39
CCT4-204ENST00000544079 ERC2-IT1O76042 136 aa12.64□□□□□ -0.39
CCT4-204ENST00000544079 RPL35AP18077 110 aaKnown RBP12.64□□□□□ -0.39
CCT4-204ENST00000544079 SNURFQ9Y675 71 aa12.64□□□□□ -0.39
CCT4-204ENST00000544079 DEFB114Q30KQ6 69 aa12.64□□□□□ -0.39
CCT4-204ENST00000544079 TRBV7-4A0A0J9YYF1 115 aa12.63□□□□□ -0.39
CCT4-204ENST00000544079 B4DSR2 109 aa12.63□□□□□ -0.39
CCT4-204ENST00000544079 HECTD1Q9ULT8 2610 aa12.63□□□□□ -0.39
CCT4-204ENST00000544079 STHQ8IWL8 128 aa12.63□□□□□ -0.39
CCT4-204ENST00000544079 ZNF702PQ9H963 129 aa12.63□□□□□ -0.39
CCT4-204ENST00000544079 NAV2Q8IVL1 2488 aa12.62□□□□□ -0.39
CCT4-204ENST00000544079 HAMPP81172 84 aa12.62□□□□□ -0.39
CCT4-204ENST00000544079 CYSRT1A8MQ03 144 aa12.6□□□□□ -0.39
CCT4-204ENST00000544079 ZFHX3Q15911 3703 aa12.6□□□□□ -0.39
CCT4-204ENST00000544079 MIFP14174 115 aa12.6□□□□□ -0.39
CCT4-204ENST00000544079 ODF3L2Q3SX64 289 aa12.6□□□□□ -0.39
CCT4-204ENST00000544079 C6orf99Q4VX62 202 aa12.6□□□□□ -0.39
CCT4-204ENST00000544079 SPTA1P02549 2419 aa12.59□□□□□ -0.39
CCT4-204ENST00000544079 IGHV4-30-2A0A087WSY4 118 aa12.59□□□□□ -0.39
CCT4-204ENST00000544079 NOP10Q9NPE3 64 aaKnown RBP12.59□□□□□ -0.39
CCT4-204ENST00000544079 Q8N3U1 123 aa12.59□□□□□ -0.39
CCT4-204ENST00000544079 LAMTOR3Q9UHA4 124 aa12.59□□□□□ -0.39
CCT4-204ENST00000544079 LOC100131303A0A0U1RQF7 123 aa12.58□□□□□ -0.4
CCT4-204ENST00000544079 DEFB136Q30KP8 78 aa12.58□□□□□ -0.4
CCT4-204ENST00000544079 WFDC11Q8NEX6 87 aa12.58□□□□□ -0.4
CCT4-204ENST00000544079 C16orf74Q96GX8 76 aa12.58□□□□□ -0.4
CCT4-204ENST00000544079 PTPN13Q12923 2485 aa12.58□□□□□ -0.4
CCT4-204ENST00000544079 RELNP78509 3460 aa12.58□□□□□ -0.4
CCT4-204ENST00000544079 RNASE1P07998 156 aaKnown RBP12.58□□□□□ -0.4
CCT4-204ENST00000544079 C4orf3Q8WVX3 66 aa12.58□□□□□ -0.4
CCT4-204ENST00000544079 PKIGQ9Y2B9 76 aa12.58□□□□□ -0.4
CCT4-204ENST00000544079 PRR3P79522 188 aaKnown RBP12.57□□□□□ -0.4
CCT4-204ENST00000544079 CCL19Q99731 98 aa12.57□□□□□ -0.4
CCT4-204ENST00000544079 C11orf68Q9H3H3 251 aaKnown RBP12.57□□□□□ -0.4
CCT4-204ENST00000544079 TRGV2A0A075B6R0 118 aa12.56□□□□□ -0.4
CCT4-204ENST00000544079 IGHV4-28A0A0C4DH34 117 aa12.56□□□□□ -0.4
CCT4-204ENST00000544079 C18orf65Q6ZTR6 163 aa12.56□□□□□ -0.4
CCT4-204ENST00000544079 MUC7Q8TAX7 377 aa12.55□□□□□ -0.4
CCT4-204ENST00000544079 LINC00474Q9P2X8 69 aa12.55□□□□□ -0.4
CCT4-204ENST00000544079 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.55□□□□□ -0.49e-7■■■■□ 25.1
CCT4-204ENST00000544079 TRGV4A0A0C4DH28 118 aa12.55□□□□□ -0.4
CCT4-204ENST00000544079 M0R2N4 97 aa12.55□□□□□ -0.4
CCT4-204ENST00000544079 TM2D3Q9BRN9 247 aa12.55□□□□□ -0.4
CCT4-204ENST00000544079 UBR5O95071 2799 aaPredicted RBP12.55□□□□□ -0.4
CCT4-204ENST00000544079 A0A1B0GUV1 79 aa12.54□□□□□ -0.4
CCT4-204ENST00000544079 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
CCT4-204ENST00000544079 NREPQ16612 68 aa12.53□□□□□ -0.4
CCT4-204ENST00000544079 C1orf195Q5TG92 126 aa12.53□□□□□ -0.4
CCT4-204ENST00000544079 TMEM254Q8TBM7 123 aa12.53□□□□□ -0.4
CCT4-204ENST00000544079 C19orf84I3L1E1 186 aa12.52□□□□□ -0.41
CCT4-204ENST00000544079 KIAA0087Q14695 138 aa12.52□□□□□ -0.41
CCT4-204ENST00000544079 BRK1Q8WUW1 75 aa12.52□□□□□ -0.41
CCT4-204ENST00000544079 Q6YL49 198 aa12.5□□□□□ -0.41
CCT4-204ENST00000544079 V9GYY9 64 aa12.5□□□□□ -0.41
CCT4-204ENST00000544079 SPATA3Q8NHX4 192 aa12.49□□□□□ -0.41
CCT4-204ENST00000544079 LINC01356Q8N9X3 169 aa12.48□□□□□ -0.41
CCT4-204ENST00000544079 BPY2O14599 106 aa12.48□□□□□ -0.41
CCT4-204ENST00000544079 IGHV4-31P0DP07 118 aa12.48□□□□□ -0.41
CCT4-204ENST00000544079 CMC4P56277 68 aaPredicted RBP12.48□□□□□ -0.41
CCT4-204ENST00000544079 DSCR9P59020 149 aa12.48□□□□□ -0.41
CCT4-204ENST00000544079 IGLV6-57P01721 117 aa12.47□□□□□ -0.41
CCT4-204ENST00000544079 CREBBPQ92793 2442 aa12.47□□□□□ -0.41
CCT4-204ENST00000544079 FLNCQ14315 2725 aa12.47□□□□□ -0.41
CCT4-204ENST00000544079 Q6ZQY7 126 aa12.46□□□□□ -0.42
CCT4-204ENST00000544079 AKAP6Q13023 2319 aa12.46□□□□□ -0.42
CCT4-204ENST00000544079 CD164L2Q6UWJ8 174 aa12.45□□□□□ -0.42
CCT4-204ENST00000544079 A0A0U1RQV1 116 aa12.45□□□□□ -0.42
CCT4-204ENST00000544079 GIG44P09565 113 aaPredicted RBP12.45□□□□□ -0.42
CCT4-204ENST00000544079 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.45□□□□□ -0.42
CCT4-204ENST00000544079 Q8NDZ9 215 aa12.45□□□□□ -0.42
CCT4-204ENST00000544079 ESRGQ1W209 222 aa12.44□□□□□ -0.42
CCT4-204ENST00000544079 KHDC1LQ5JSQ8 128 aa12.44□□□□□ -0.42
CCT4-204ENST00000544079 PRYO14603 147 aa12.44□□□□□ -0.42
CCT4-204ENST00000544079 LRRK2Q5S007 2527 aa12.43□□□□□ -0.42
CCT4-204ENST00000544079 CCL24O00175 119 aa12.43□□□□□ -0.42
CCT4-204ENST00000544079 FSHBP01225 129 aa12.43□□□□□ -0.42
CCT4-204ENST00000544079 GNLYP22749 145 aa12.43□□□□□ -0.42
CCT4-204ENST00000544079 SEC61GP60059 68 aa12.42□□□□□ -0.42
CCT4-204ENST00000544079 COL12A1Q99715 3063 aa12.42□□□□□ -0.42
CCT4-204ENST00000544079 FAM229BQ4G0N7 80 aa12.41□□□□□ -0.42
CCT4-204ENST00000544079 CELSR1Q9NYQ6 3014 aa12.41□□□□□ -0.42
CCT4-204ENST00000544079 FUSP35637 526 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCT4-204ENST00000544079 OCR1Q9BZK8 76 aa12.41□□□□□ -0.42
CCT4-204ENST00000544079 NBASA2RRP1 2371 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms