RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 CELA1Q9UNI1 258 aa12.28□□□□□ -0.44
PTPN6-222ENST00000543744 TRAV26-1A0A087WT03 109 aa12.28□□□□□ -0.44
PTPN6-222ENST00000543744 PFN2P35080 140 aa12.28□□□□□ -0.44
PTPN6-222ENST00000543744 XGP55808 180 aa12.28□□□□□ -0.44
PTPN6-222ENST00000543744 SPART-AS1P0CW21 52 aa12.27□□□□□ -0.44
PTPN6-222ENST00000543744 CCL18P55774 89 aa12.27□□□□□ -0.44
PTPN6-222ENST00000543744 LINC00269Q8N2A0 174 aa12.27□□□□□ -0.44
PTPN6-222ENST00000543744 C11orf68Q9H3H3 251 aaKnown RBP12.27□□□□□ -0.44
PTPN6-222ENST00000543744 IGHV4-30-4P0DP06 118 aa12.27□□□□□ -0.45
PTPN6-222ENST00000543744 Q8IZM0 81 aa12.27□□□□□ -0.45
PTPN6-222ENST00000543744 LINC01561Q8N1V8 128 aa12.27□□□□□ -0.45
PTPN6-222ENST00000543744 IGKV2-28A0A075B6P5 120 aa12.26□□□□□ -0.45
PTPN6-222ENST00000543744 WIPF1O43516 503 aa12.26□□□□□ -0.45
PTPN6-222ENST00000543744 IGKV2D-28P01615 120 aa12.26□□□□□ -0.45
PTPN6-222ENST00000543744 MT-ATP8P03928 68 aa12.26□□□□□ -0.45
PTPN6-222ENST00000543744 LINC00337Q8N6G1 96 aa12.26□□□□□ -0.45
PTPN6-222ENST00000543744 ANGP03950 147 aaKnown RBP12.24□□□□□ -0.45
PTPN6-222ENST00000543744 RPL28P46779 137 aaKnown RBP12.24□□□□□ -0.45
PTPN6-222ENST00000543744 TRAV8-4A0A0B4J246 113 aa12.23□□□□□ -0.45
PTPN6-222ENST00000543744 HTN3P15516 51 aa12.23□□□□□ -0.45
PTPN6-222ENST00000543744 MRPL23Q16540 153 aaKnown RBP12.23□□□□□ -0.45
PTPN6-222ENST00000543744 CD164L2Q6UWJ8 174 aa12.23□□□□□ -0.45
PTPN6-222ENST00000543744 TRACP01848 142 aa12.23□□□□□ -0.45
PTPN6-222ENST00000543744 REG3AQ06141 175 aa12.23□□□□□ -0.45
PTPN6-222ENST00000543744 Q8N3U1 123 aa12.22□□□□□ -0.45
PTPN6-222ENST00000543744 CHCHD10Q8WYQ3 142 aaPredicted RBP12.22□□□□□ -0.45
PTPN6-222ENST00000543744 CKS1BP61024 79 aa12.21□□□□□ -0.45
PTPN6-222ENST00000543744 TRRAPQ9Y4A5 3859 aa12.21□□□□□ -0.45
PTPN6-222ENST00000543744 IGLV10-54A0A075B6I4 117 aa12.2□□□□□ -0.46
PTPN6-222ENST00000543744 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
PTPN6-222ENST00000543744 FAM218AQ96MZ4 157 aa12.2□□□□□ -0.46
PTPN6-222ENST00000543744 MALP21145 153 aa12.19□□□□□ -0.46
PTPN6-222ENST00000543744 SMIM11BQ8TCY0 68 aa12.19□□□□□ -0.46
PTPN6-222ENST00000543744 LELP1Q5T871 98 aa12.18□□□□□ -0.46
PTPN6-222ENST00000543744 CFAP161Q6P656 301 aa12.18□□□□□ -0.46
PTPN6-222ENST00000543744 KIAA0087Q14695 138 aa12.18□□□□□ -0.46
PTPN6-222ENST00000543744 BAALC-AS2P0C853 105 aa12.16□□□□□ -0.46
PTPN6-222ENST00000543744 CXCL5P42830 114 aa12.16□□□□□ -0.46
PTPN6-222ENST00000543744 OR13C6PQ8NH95 151 aa12.16□□□□□ -0.46
PTPN6-222ENST00000543744 OXLD1Q5BKU9 147 aa12.15□□□□□ -0.47
PTPN6-222ENST00000543744 H0YGX0 51 aa12.14□□□□□ -0.47
PTPN6-222ENST00000543744 COX17Q14061 63 aa12.14□□□□□ -0.47
PTPN6-222ENST00000543744 FAM240AA0A1B0GVK7 77 aa12.13□□□□□ -0.47
PTPN6-222ENST00000543744 SNCGO76070 127 aa12.13□□□□□ -0.47
PTPN6-222ENST00000543744 Q9HAA7 133 aa12.13□□□□□ -0.47
PTPN6-222ENST00000543744 A0A087WYN8 130 aa12.11□□□□□ -0.47
PTPN6-222ENST00000543744 DNAL4O96015 105 aa12.11□□□□□ -0.47
PTPN6-222ENST00000543744 KRTAP10-11P60412 298 aa12.11□□□□□ -0.47
PTPN6-222ENST00000543744 KLK12Q9UKR0 248 aa12.11□□□□□ -0.47
PTPN6-222ENST00000543744 A0A1B0GV72 72 aa12.1□□□□□ -0.47
PTPN6-222ENST00000543744 LYPD5Q6UWN5 251 aa12.1□□□□□ -0.47
PTPN6-222ENST00000543744 C15orf53Q8NAA6 179 aa12.1□□□□□ -0.47
PTPN6-222ENST00000543744 PRR34Q9NV39 138 aa12.1□□□□□ -0.47
PTPN6-222ENST00000543744 KLK5Q9Y337 293 aaPredicted RBP12.1□□□□□ -0.47
PTPN6-222ENST00000543744 C22orf24Q9Y442 160 aa12.09□□□□□ -0.47
PTPN6-222ENST00000543744 C9orf116Q5BN46 136 aaPredicted RBP12.08□□□□□ -0.48
PTPN6-222ENST00000543744 RETNQ9HD89 108 aa12.08□□□□□ -0.48
PTPN6-222ENST00000543744 NDUFC2O95298 119 aa12.08□□□□□ -0.48
PTPN6-222ENST00000543744 SPAG11BQ08648 103 aa12.07□□□□□ -0.48
PTPN6-222ENST00000543744 GAGE2BQ13066 116 aa12.07□□□□□ -0.48
PTPN6-222ENST00000543744 GAGE2EQ4V326 116 aa12.07□□□□□ -0.48
PTPN6-222ENST00000543744 GAGE2DQ9UEU5 116 aa12.07□□□□□ -0.48
PTPN6-222ENST00000543744 ACYP1P07311 99 aa12.06□□□□□ -0.48
PTPN6-222ENST00000543744 PRR3P79522 188 aaKnown RBP12.06□□□□□ -0.48
PTPN6-222ENST00000543744 ENHOQ6UWT2 76 aa12.06□□□□□ -0.48
PTPN6-222ENST00000543744 F8P00451 2351 aa12.06□□□□□ -0.48
PTPN6-222ENST00000543744 LECT2O14960 151 aa12.05□□□□□ -0.48
PTPN6-222ENST00000543744 KRTAP24-1Q3LI83 254 aa12.05□□□□□ -0.48
PTPN6-222ENST00000543744 H3BNG1 76 aa12.04□□□□□ -0.48
PTPN6-222ENST00000543744 INAFM2P0DMQ5 153 aa12.04□□□□□ -0.48
PTPN6-222ENST00000543744 UNQ6190/PRO20217Q6UXQ8 127 aa12.04□□□□□ -0.48
PTPN6-222ENST00000543744 C6orf223Q8N319 242 aa12.04□□□□□ -0.48
PTPN6-222ENST00000543744 EGFEM1PQ0D2K5 195 aa12.04□□□□□ -0.48
PTPN6-222ENST00000543744 TTC32Q5I0X7 151 aa12.04□□□□□ -0.48
PTPN6-222ENST00000543744 KPRPQ5T749 579 aaPredicted RBP12.04□□□□□ -0.48
PTPN6-222ENST00000543744 C10orf25Q5T742 122 aa12.03□□□□□ -0.48
PTPN6-222ENST00000543744 TMEM126AQ9H061 195 aa12.03□□□□□ -0.48
PTPN6-222ENST00000543744 C3orf56Q8N813 242 aa12.03□□□□□ -0.48
PTPN6-222ENST00000543744 CYSRT1A8MQ03 144 aa12.02□□□□□ -0.49
PTPN6-222ENST00000543744 NANOS2P60321 138 aaKnown RBP12.02□□□□□ -0.49
PTPN6-222ENST00000543744 LINC00526Q96FQ7 95 aa12.02□□□□□ -0.49
PTPN6-222ENST00000543744 A0A0J9YWU9 116 aa12.01□□□□□ -0.49
PTPN6-222ENST00000543744 Q6Q795 121 aa12.01□□□□□ -0.49
PTPN6-222ENST00000543744 Q6ZTC4 211 aa12.01□□□□□ -0.49
PTPN6-222ENST00000543744 MUC7Q8TAX7 377 aa12.01□□□□□ -0.49
PTPN6-222ENST00000543744 WFDC10BQ8IUB3 73 aa11.99□□□□□ -0.49
PTPN6-222ENST00000543744 NCR3O14931 201 aa11.99□□□□□ -0.49
PTPN6-222ENST00000543744 SLPIP03973 132 aa11.98□□□□□ -0.49
PTPN6-222ENST00000543744 Q8NDZ9 215 aa11.98□□□□□ -0.49
PTPN6-222ENST00000543744 S100A7L2Q5SY68 101 aa11.97□□□□□ -0.49
PTPN6-222ENST00000543744 ANAPC13Q9BS18 74 aa11.97□□□□□ -0.49
PTPN6-222ENST00000543744 ORMDL1Q9P0S3 153 aa11.97□□□□□ -0.49
PTPN6-222ENST00000543744 FLNBO75369 2602 aaKnown RBP11.96□□□□□ -0.49
PTPN6-222ENST00000543744 GVQW2A0A096LPI5 108 aaPredicted RBP11.96□□□□□ -0.49
PTPN6-222ENST00000543744 A0A1B0GX51 115 aa11.96□□□□□ -0.49
PTPN6-222ENST00000543744 GAGE2AQ6NT46 116 aa11.96□□□□□ -0.49
PTPN6-222ENST00000543744 C9orf129Q5T035 196 aaKnown RBP11.95□□□□□ -0.5
PTPN6-222ENST00000543744 Q8N814 137 aa11.94□□□□□ -0.5
PTPN6-222ENST00000543744 OBSCN-AS1Q96MR7 158 aa11.94□□□□□ -0.5
PTPN6-222ENST00000543744 NDUFV3P56181 108 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms