RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 MUC4Q99102 2169 aa2.57□□□□□ -2
MDM2-229ENST00000543046 NAV3Q8IVL0 2385 aa2.57□□□□□ -2
MDM2-229ENST00000543046 TRBV6-4A0A1B0GX49 114 aa2.56□□□□□ -2
MDM2-229ENST00000543046 C16orf90A8MZG2 172 aa2.56□□□□□ -2
MDM2-229ENST00000543046 KRTAP4-16G5E9R7 235 aaPredicted RBP2.56□□□□□ -2
MDM2-229ENST00000543046 PSCAO43653 123 aa2.56□□□□□ -2
MDM2-229ENST00000543046 IGHV1-46P01743 117 aa2.56□□□□□ -2
MDM2-229ENST00000543046 APELAP0DMC3 54 aa2.56□□□□□ -2
MDM2-229ENST00000543046 PRB4P10163 310 aaPredicted RBP2.56□□□□□ -2
MDM2-229ENST00000543046 ASB16-AS1Q495Z4 193 aa2.56□□□□□ -2
MDM2-229ENST00000543046 C1orf64Q8NEQ6 169 aa2.56□□□□□ -2
MDM2-229ENST00000543046 DEFB108BQ8NET1 73 aa2.56□□□□□ -2
MDM2-229ENST00000543046 C7orf33Q8WU49 177 aa2.56□□□□□ -2
MDM2-229ENST00000543046 ZCCHC13Q8WW36 166 aaKnown RBP2.56□□□□□ -2
MDM2-229ENST00000543046 CHCHD7Q9BUK0 85 aa2.56□□□□□ -2
MDM2-229ENST00000543046 PDE4DIPQ5VU43 2346 aa2.56□□□□□ -2
MDM2-229ENST00000543046 IGHV3-72A0A0B4J1Y9 119 aa2.55□□□□□ -2
MDM2-229ENST00000543046 TRBV10-1A0A0K0K1A3 114 aa2.55□□□□□ -2
MDM2-229ENST00000543046 A0A1B0GW54 56 aa2.55□□□□□ -2
MDM2-229ENST00000543046 NDUFB1O75438 58 aa2.55□□□□□ -2
MDM2-229ENST00000543046 HAMPP81172 84 aa2.55□□□□□ -2
MDM2-229ENST00000543046 Q5VV11 94 aa2.55□□□□□ -2
MDM2-229ENST00000543046 NTM-AS1Q6ZSK4 140 aa2.55□□□□□ -2
MDM2-229ENST00000543046 LOC101927531A0A1B0GV80 90 aa2.54□□□□□ -2
MDM2-229ENST00000543046 A8MUN3 132 aa2.54□□□□□ -2
MDM2-229ENST00000543046 HCG22E2RYF7 251 aa2.54□□□□□ -2
MDM2-229ENST00000543046 CCL18P55774 89 aa2.54□□□□□ -2
MDM2-229ENST00000543046 COX6A2Q02221 97 aa2.54□□□□□ -2
MDM2-229ENST00000543046 KIAA0087Q14695 138 aa2.54□□□□□ -2
MDM2-229ENST00000543046 Q6ZTI0 123 aa2.54□□□□□ -2
MDM2-229ENST00000543046 Q8N9L7 120 aa2.54□□□□□ -2
MDM2-229ENST00000543046 CADP27708 2225 aa2.53□□□□□ -2
MDM2-229ENST00000543046 PSPHP1O15172 72 aa2.53□□□□□ -2
MDM2-229ENST00000543046 COX7A1P24310 79 aa2.53□□□□□ -2
MDM2-229ENST00000543046 MINOS1Q5TGZ0 78 aa2.53□□□□□ -2
MDM2-229ENST00000543046 CLEC19AQ6UXS0 136 aa2.53□□□□□ -2
MDM2-229ENST00000543046 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
MDM2-229ENST00000543046 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.52□□□□□ -2.01
MDM2-229ENST00000543046 CHKB-CPT1BH3BT56 60 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 NDUFA4O00483 81 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 CHTF8P0CG12 524 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 FAM74A4Q5TZK3 123 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 IGFL3Q6UXB1 125 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 LYPD2Q6UXB3 125 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 LINC00575Q6W349 94 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 SPANXA2-OT1Q8N9U9 137 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 COX7B2Q8TF08 81 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 Q9BRP9 147 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 HIGD2AQ9BW72 106 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 S4R3C0 116 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 U3KQA8 63 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 ABCA1O95477 2261 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 F5P12259 2224 aa2.52□□□□□ -2.01
MDM2-229ENST00000543046 A0A096LNT2 108 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 IGHV3-49A0A0A0MS15 119 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 ODF3BA8MYP8 253 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 IGHV3-53P01767 116 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 IGKV4-1P06312 121 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 LINC00158P58513 81 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 C9orf116Q5BN46 136 aaPredicted RBP2.51□□□□□ -2.01
MDM2-229ENST00000543046 MUC7Q8TAX7 377 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 LINC00467Q9BRT7 94 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 CDC42SE2Q9NRR3 84 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 MINOS1-NBL1R4GNA1 71 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 ASXL3Q9C0F0 2248 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 CNTRLQ7Z7A1 2325 aa2.51□□□□□ -2.01
MDM2-229ENST00000543046 A0A0C4DFX4 3053 aa2.5□□□□□ -2.01
MDM2-229ENST00000543046 IGHV3-66A0A0C4DH42 116 aa2.5□□□□□ -2.01
MDM2-229ENST00000543046 C3orf84H3BNL1 204 aa2.5□□□□□ -2.01
MDM2-229ENST00000543046 H3BPC8 53 aa2.5□□□□□ -2.01
MDM2-229ENST00000543046 COX7BP24311 80 aa2.5□□□□□ -2.01
MDM2-229ENST00000543046 COX17Q14061 63 aa2.5□□□□□ -2.01
MDM2-229ENST00000543046 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.5□□□□□ -2.01
MDM2-229ENST00000543046 CNEP1R1Q8N9A8 125 aa2.5□□□□□ -2.01
MDM2-229ENST00000543046 DEFB104AQ8WTQ1 72 aa2.5□□□□□ -2.01
MDM2-229ENST00000543046 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
MDM2-229ENST00000543046 ETDCA0A1B0GVM5 59 aa2.49□□□□□ -2.01
MDM2-229ENST00000543046 H3BUA1 57 aa2.49□□□□□ -2.01
MDM2-229ENST00000543046 PRM2P04554 102 aa2.49□□□□□ -2.01
MDM2-229ENST00000543046 LINC01554Q52M75 96 aa2.49□□□□□ -2.01
MDM2-229ENST00000543046 RNASE13Q5GAN3 156 aaKnown RBP2.49□□□□□ -2.01
MDM2-229ENST00000543046 DEFB119Q8N690 84 aa2.49□□□□□ -2.01
MDM2-229ENST00000543046 Q8N9W7 124 aa2.49□□□□□ -2.01
MDM2-229ENST00000543046 B9D2Q9BPU9 175 aa2.49□□□□□ -2.01
MDM2-229ENST00000543046 KLK12Q9UKR0 248 aa2.49□□□□□ -2.01
MDM2-229ENST00000543046 DNAJC13O75165 2243 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 TRGV2A0A075B6R0 118 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 IGHV3OR16-8A0A075B7F1 116 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 IGHV3OR16-9A0A0B4J2B5 98 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 LRCOL1A6NCL2 159 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 A8MTW9 85 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 C19orf84I3L1E1 186 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 M0R2N4 97 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 MP68P56378 58 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 CNBPP62633 177 aaKnown RBP2.48□□□□□ -2.01
MDM2-229ENST00000543046 PRR3P79522 188 aaKnown RBP2.48□□□□□ -2.01
MDM2-229ENST00000543046 MOBPQ13875 183 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 SPTSSBQ8NFR3 76 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 USMG5Q96IX5 58 aa2.48□□□□□ -2.01
MDM2-229ENST00000543046 PLAC8Q9NZF1 115 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms