RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 C9orf129Q5T035 196 aaKnown RBP3.79□□□□□ -1.8
KDM3B-209ENST00000542866 C1orf195Q5TG92 126 aa3.79□□□□□ -1.8
KDM3B-209ENST00000542866 ESM1Q9NQ30 184 aa3.79□□□□□ -1.8
KDM3B-209ENST00000542866 SLPIP03973 132 aa3.79□□□□□ -1.8
KDM3B-209ENST00000542866 RPL36AP83881 106 aaKnown RBP3.79□□□□□ -1.8
KDM3B-209ENST00000542866 KRTAP1-1Q07627 177 aa3.79□□□□□ -1.8
KDM3B-209ENST00000542866 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
KDM3B-209ENST00000542866 STHQ8IWL8 128 aa3.79□□□□□ -1.8
KDM3B-209ENST00000542866 RPL36ALQ969Q0 106 aaKnown RBP3.79□□□□□ -1.8
KDM3B-209ENST00000542866 RETNQ9HD89 108 aa3.79□□□□□ -1.8
KDM3B-209ENST00000542866 LECT2O14960 151 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 PFN2P35080 140 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 HIST1H4AP62805 103 aaKnown RBP3.78□□□□□ -1.8
KDM3B-209ENST00000542866 LINC00337Q8N6G1 96 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 C2orf48Q96LS8 159 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 NCR3O14931 201 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 FAM222AQ5U5X8 452 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 SMIM11BQ8TCY0 68 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 CYSTM1Q9H1C7 97 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 LINC00846Q9NV44 126 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 NBPF19A0A087WUL8 3843 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 PAX4O43316 350 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 INSP01308 110 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 RPL28P46779 137 aaKnown RBP3.78□□□□□ -1.8
KDM3B-209ENST00000542866 RPL18AQ02543 176 aaKnown RBP3.78□□□□□ -1.8
KDM3B-209ENST00000542866 FAM19A1Q7Z5A9 133 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 C11orf72Q8NBR9 251 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 DPH3Q96FX2 82 aa3.78□□□□□ -1.8
KDM3B-209ENST00000542866 C11orf68Q9H3H3 251 aaKnown RBP3.78□□□□□ -1.8
KDM3B-209ENST00000542866 CRYGAP11844 174 aa3.77□□□□□ -1.81
KDM3B-209ENST00000542866 NTM-AS1Q6ZSK4 140 aa3.77□□□□□ -1.81
KDM3B-209ENST00000542866 CDC42SE2Q9NRR3 84 aa3.77□□□□□ -1.81
KDM3B-209ENST00000542866 COX7B2Q8TF08 81 aa3.77□□□□□ -1.81
KDM3B-209ENST00000542866 C4orf3Q8WVX3 66 aa3.77□□□□□ -1.81
KDM3B-209ENST00000542866 IGKV2-28A0A075B6P5 120 aa3.77□□□□□ -1.81
KDM3B-209ENST00000542866 IGKV2D-28P01615 120 aa3.77□□□□□ -1.81
KDM3B-209ENST00000542866 DSCR8Q96T75 97 aa3.77□□□□□ -1.81
KDM3B-209ENST00000542866 MAP6D1Q9H9H5 199 aa3.77□□□□□ -1.81
KDM3B-209ENST00000542866 NIPBLQ6KC79 2804 aaeCLIP3.76□□□□□ -1.81
KDM3B-209ENST00000542866 HIVEP1P15822 2718 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 K7EQD1 137 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 Q6ZTI0 123 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 OVOL2Q9BRP0 275 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 USP17L23D6RBM5 183 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 CCL18P55774 89 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 SERP2Q8N6R1 65 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 WFDC9Q8NEX5 89 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 TMEM243Q9BU79 118 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 C16orf95Q9H693 158 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 H0YGX0 51 aa3.76□□□□□ -1.81
KDM3B-209ENST00000542866 Q6JHZ5 121 aa3.75□□□□□ -1.81
KDM3B-209ENST00000542866 LOC100131303A0A0U1RQF7 123 aa3.75□□□□□ -1.81
KDM3B-209ENST00000542866 NOP10Q9NPE3 64 aaKnown RBP3.75□□□□□ -1.81
KDM3B-209ENST00000542866 TRGV2A0A075B6R0 118 aa3.75□□□□□ -1.81
KDM3B-209ENST00000542866 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
KDM3B-209ENST00000542866 VPS13CQ709C8 3753 aa3.75□□□□□ -1.81
KDM3B-209ENST00000542866 TRAV23DV6A0A075B6W5 121 aa3.74□□□□□ -1.81
KDM3B-209ENST00000542866 A0A0U1RQV1 116 aa3.74□□□□□ -1.81
KDM3B-209ENST00000542866 CMC4P56277 68 aaPredicted RBP3.74□□□□□ -1.81
KDM3B-209ENST00000542866 TMEM258P61165 79 aa3.74□□□□□ -1.81
KDM3B-209ENST00000542866 ORMDL1Q9P0S3 153 aa3.74□□□□□ -1.81
KDM3B-209ENST00000542866 ZANQ9Y493 2812 aa3.74□□□□□ -1.81
KDM3B-209ENST00000542866 C9orf66Q5T8R8 295 aa3.74□□□□□ -1.81
KDM3B-209ENST00000542866 C1orf158Q8N1D5 194 aa3.74□□□□□ -1.81
KDM3B-209ENST00000542866 TRBV10-1A0A0K0K1A3 114 aa3.74□□□□□ -1.81
KDM3B-209ENST00000542866 KRTAP24-1Q3LI83 254 aa3.74□□□□□ -1.81
KDM3B-209ENST00000542866 FAM19A3Q7Z5A8 133 aa3.74□□□□□ -1.81
KDM3B-209ENST00000542866 FBN2P35556 2912 aa3.73□□□□□ -1.81
KDM3B-209ENST00000542866 IGLV4-60A0A075B6I1 120 aa3.73□□□□□ -1.81
KDM3B-209ENST00000542866 GHRHP01286 108 aa3.73□□□□□ -1.81
KDM3B-209ENST00000542866 LINC00482Q8N8I6 264 aa3.73□□□□□ -1.81
KDM3B-209ENST00000542866 CR1P17927 2039 aa3.73□□□□□ -1.81
KDM3B-209ENST00000542866 TRGV4A0A0C4DH28 118 aa3.73□□□□□ -1.81
KDM3B-209ENST00000542866 CYSRT1A8MQ03 144 aa3.73□□□□□ -1.81
KDM3B-209ENST00000542866 A8MTW9 85 aa3.73□□□□□ -1.81
KDM3B-209ENST00000542866 DEFB114Q30KQ6 69 aa3.73□□□□□ -1.81
KDM3B-209ENST00000542866 PRR3P79522 188 aaKnown RBP3.72□□□□□ -1.81
KDM3B-209ENST00000542866 ENHOQ6UWT2 76 aa3.72□□□□□ -1.81
KDM3B-209ENST00000542866 NSD1Q96L73 2696 aaPredicted RBP3.72□□□□□ -1.81
KDM3B-209ENST00000542866 IBA57-AS1B1ANH7 110 aa3.72□□□□□ -1.81
KDM3B-209ENST00000542866 SPATA3Q8NHX4 192 aa3.72□□□□□ -1.81
KDM3B-209ENST00000542866 UPK3BQ9BT76 320 aa3.72□□□□□ -1.81
KDM3B-209ENST00000542866 CCKP06307 115 aa3.72□□□□□ -1.81
KDM3B-209ENST00000542866 ODF3L2Q3SX64 289 aa3.72□□□□□ -1.81
KDM3B-209ENST00000542866 CLPSL2Q6UWE3 100 aa3.72□□□□□ -1.81
KDM3B-209ENST00000542866 C20orf197Q8N268 126 aa3.72□□□□□ -1.81
KDM3B-209ENST00000542866 CUBNO60494 3623 aa3.72□□□□□ -1.81
KDM3B-209ENST00000542866 XCL1P47992 114 aa3.71□□□□□ -1.81
KDM3B-209ENST00000542866 FHL2Q14192 279 aa3.71□□□□□ -1.81
KDM3B-209ENST00000542866 AKAP9Q99996 3911 aa3.71□□□□□ -1.82
KDM3B-209ENST00000542866 TRBV6-4A0A1B0GX49 114 aa3.71□□□□□ -1.82
KDM3B-209ENST00000542866 S100A7L2Q5SY68 101 aa3.71□□□□□ -1.82
KDM3B-209ENST00000542866 OBSCN-AS1Q96MR7 158 aa3.71□□□□□ -1.82
KDM3B-209ENST00000542866 IGHV3OR16-9A0A0B4J2B5 98 aa3.71□□□□□ -1.82
KDM3B-209ENST00000542866 KRTAP21-3Q3LHN1 58 aa3.7□□□□□ -1.82
KDM3B-209ENST00000542866 UBL5Q9BZL1 73 aa3.7□□□□□ -1.82
KDM3B-209ENST00000542866 JMJD7-PLA2G4BH0Y9G9 81 aa3.7□□□□□ -1.82
KDM3B-209ENST00000542866 A0A087WZ39 114 aa3.7□□□□□ -1.82
KDM3B-209ENST00000542866 SS18Q15532 418 aa3.7□□□□□ -1.82
KDM3B-209ENST00000542866 CSMD2Q7Z408 3487 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms