RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 FAM167A-AS1Q96KT0 104 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 SMR3AQ99954 134 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 DPH3P1Q9H4G8 78 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 C16orf95Q9H693 158 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 CUBNO60494 3623 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 SONP18583 2426 aaKnown RBP2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 TRGV5A0A0B4J1U4 118 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 hADV29S1A0JD25 119 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 H3BT86 120 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 LY6HO94772 140 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 TFF1P04155 84 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 CCL3P10147 92 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 UBE2L3P68036 154 aaKnown RBP2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 ZNF56Q15929 161 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 SDIM1Q6ZPB5 146 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 SERP2Q8N6R1 65 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 DSCR8Q96T75 97 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 NABP2Q9BQ15 211 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 C11orf68Q9H3H3 251 aaKnown RBP2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 TMEM167BQ9NRX6 74 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 HHLA3Q9XRX5 114 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 TIMM8BQ9Y5J9 83 aaPredicted RBP2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 WNK1Q9H4A3 2382 aa2.31□□□□□ -2.04
SFSWAP-211ENST00000542813 RYR3Q15413 4870 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 KMT2CQ8NEZ4 4911 aaKnown RBP2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 IGHV3-73A0A0B4J1V6 119 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 LOC107984156A0A0G2JMH3 177 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 TRBV10-2A0A0K0K1G8 114 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 C19orf84I3L1E1 186 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 LYZL6O75951 148 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 RPL27AP46776 148 aaKnown RBP2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 FXYD7P58549 80 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 TMEM155Q4W5P6 130 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 PRR15Q8IV56 129 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 ARL17AQ8IVW1 177 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 WFDC11Q8NEX6 87 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 FDCSPQ8NFU4 85 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 MUC7Q8TAX7 377 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 RTL8AQ9BWD3 113 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 PROK2Q9HC23 129 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 NXT2Q9NPJ8 142 aaKnown RBP2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 OTORQ9NRC9 128 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 TANC2Q9HCD6 1990 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 RP1P56715 2156 aa2.3□□□□□ -2.04
SFSWAP-211ENST00000542813 ZANQ9Y493 2812 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 PRRC2AP48634 2157 aaKnown RBP2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 BIRC6Q9NR09 4857 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 IGKV2-28A0A075B6P5 120 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 TRBV7-6A0A0J9YX20 115 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 LINC01546A6NGU7 62 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 LINC01549A6NIU2 74 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 H3BVH4 76 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 IGKV2D-28P01615 120 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 IGHV1-69P01742 117 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 HBDP02042 147 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 ARMS2P0C7Q2 107 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 IFI27P40305 119 aaPredicted RBP2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 MOBPQ13875 183 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 ATXN8Q156A1 80 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 IGFL3Q6UXB1 125 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 PATE2Q6UY27 113 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 NDUFA11Q86Y39 141 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 RNF182Q8N6D2 247 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 CNEP1R1Q8N9A8 125 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 AMMECR1Q9Y4X0 333 aaPredicted RBP2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 AKAP6Q13023 2319 aa2.29□□□□□ -2.04
SFSWAP-211ENST00000542813 CNTRLQ7Z7A1 2325 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 USF3Q68DE3 2245 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 UNC13CQ8NB66 2214 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 TRBV19A0A075B6N1 114 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 TMSB15BA0A087X1C1 80 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 DEFB108AA8MXU0 73 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 RNASE2P10153 161 aaKnown RBP2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 DEFB113Q30KQ7 82 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 KRTAP25-1Q3LHN0 102 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 FAM229BQ4G0N7 80 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 RPL39P5Q59GN2 51 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 FP248Q71RG6 208 aaPredicted RBP2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 Q8NAQ8 132 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 C10orf105Q8TEF2 133 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 BRK1Q8WUW1 75 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 TOMM6Q96B49 74 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 ZNF714Q96N38 554 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 DYNLRB1Q9NP97 96 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 MRPL36Q9P0J6 103 aaKnown RBP2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 PRO1854Q9UHT4 67 aa2.28□□□□□ -2.04
SFSWAP-211ENST00000542813 TEX49A0A1B0GTD5 131 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 A0A1B0GU33 70 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 TMEM30CPA0ZSE6 113 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 BCE1O60756 84 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 TCRAP04437 139 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 PRM2P04554 102 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 PRB4P10163 310 aaPredicted RBP2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 PLNP26678 52 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 FCER1GP30273 86 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 ATP5EP56381 51 aaPredicted RBP2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 PCBD1P61457 104 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 LINC00305Q7Z4B0 112 aa2.27□□□□□ -2.05
SFSWAP-211ENST00000542813 Q86TA4 180 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms