RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 GOLGA4Q13439 2230 aaKnown RBP-0.58□□□□□ -2.5
KNTC1-213ENST00000542727 CCDC168Q8NDH2 2452 aa-0.59□□□□□ -2.5
KNTC1-213ENST00000542727 GNG7O60262 68 aa-0.59□□□□□ -2.5
KNTC1-213ENST00000542727 COX6CP09669 75 aa-0.59□□□□□ -2.5
KNTC1-213ENST00000542727 FGF7P21781 194 aa-0.59□□□□□ -2.5
KNTC1-213ENST00000542727 SPRR2EP22531 72 aa-0.59□□□□□ -2.5
KNTC1-213ENST00000542727 ATP5EP56381 51 aaPredicted RBP-0.59□□□□□ -2.5
KNTC1-213ENST00000542727 GNG11P61952 73 aa-0.59□□□□□ -2.5
KNTC1-213ENST00000542727 BTG2P78543 158 aa-0.59□□□□□ -2.5
KNTC1-213ENST00000542727 CDC42SE2Q9NRR3 84 aa-0.59□□□□□ -2.5
KNTC1-213ENST00000542727 PCNX1Q96RV3 2341 aa-0.59□□□□□ -2.5
KNTC1-213ENST00000542727 ZFHX3Q15911 3703 aa-0.6□□□□□ -2.5
KNTC1-213ENST00000542727 RIF1Q5UIP0 2472 aaKnown RBP-0.6□□□□□ -2.51
KNTC1-213ENST00000542727 UBE2L5PA0A1B0GUS4 154 aa-0.6□□□□□ -2.51
KNTC1-213ENST00000542727 I3L3M4 83 aa-0.6□□□□□ -2.51
KNTC1-213ENST00000542727 UBE2L3P68036 154 aaKnown RBP-0.6□□□□□ -2.51
KNTC1-213ENST00000542727 CCDC58Q4VC31 144 aa-0.6□□□□□ -2.51
KNTC1-213ENST00000542727 C9orf62Q8N4C0 152 aa-0.6□□□□□ -2.51
KNTC1-213ENST00000542727 TSC22D3Q99576 134 aa-0.6□□□□□ -2.51
KNTC1-213ENST00000542727 C12orf57Q99622 126 aa-0.6□□□□□ -2.51
KNTC1-213ENST00000542727 HMGXB3Q12766 1538 aa-0.6□□□□□ -2.51
KNTC1-213ENST00000542727 KIAA0556O60303 1618 aa-0.6□□□□□ -2.51
KNTC1-213ENST00000542727 SMG6Q86US8 1419 aaKnown RBP-0.61□□□□□ -2.51
KNTC1-213ENST00000542727 LOC100130705A0A1B0GUX0 176 aa-0.61□□□□□ -2.51
KNTC1-213ENST00000542727 FAM24AA6NFZ4 105 aa-0.61□□□□□ -2.51
KNTC1-213ENST00000542727 H0YGG7 62 aa-0.61□□□□□ -2.51
KNTC1-213ENST00000542727 DEFB112Q30KQ8 113 aa-0.61□□□□□ -2.51
KNTC1-213ENST00000542727 MGAM2Q2M2H8 2515 aa-0.61□□□□□ -2.51
KNTC1-213ENST00000542727 DNAJC13O75165 2243 aa-0.61□□□□□ -2.51
KNTC1-213ENST00000542727 NIPBLQ6KC79 2804 aaeCLIP-0.61□□□□□ -2.51
KNTC1-213ENST00000542727 DNAH6Q9C0G6 4158 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 DNAH2Q9P225 4427 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 TRAV30A0A087WSZ9 112 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 A0A1B0GU69 56 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 AKAIN1P0CW23 69 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 SAA2P0DJI9 122 aaPredicted RBP-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 SNCAP37840 140 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 KRTAP20-1Q3LI63 56 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 H1FX-AS1Q4G0G2 97 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 SFTA2Q6UW10 78 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 LCN9Q8WX39 176 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 VAMP8Q9BV40 100 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 LINC00474Q9P2X8 69 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 PRO1854Q9UHT4 67 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 C1orf167Q5SNV9 1468 aa-0.62□□□□□ -2.51
KNTC1-213ENST00000542727 PRRC2CQ9Y520 2896 aaKnown RBP-0.63□□□□□ -2.51
KNTC1-213ENST00000542727 NAP1L6A6NFF2 107 aa-0.63□□□□□ -2.51
KNTC1-213ENST00000542727 FAM223BA6NKX1 122 aa-0.63□□□□□ -2.51
KNTC1-213ENST00000542727 UBE2D3P61077 147 aa-0.63□□□□□ -2.51
KNTC1-213ENST00000542727 UBE2D2P62837 147 aa-0.63□□□□□ -2.51
KNTC1-213ENST00000542727 Q0VG73 95 aa-0.63□□□□□ -2.51
KNTC1-213ENST00000542727 LINC00846Q9NV44 126 aa-0.63□□□□□ -2.51
KNTC1-213ENST00000542727 MYOM1P52179 1685 aa-0.63□□□□□ -2.51
KNTC1-213ENST00000542727 TNRC18O15417 2968 aaPredicted RBP-0.63□□□□□ -2.51
KNTC1-213ENST00000542727 EHBP1L1Q8N3D4 1523 aa-0.64□□□□□ -2.51
KNTC1-213ENST00000542727 LOC105371267A0A1B0GV96 52 aa-0.64□□□□□ -2.51
KNTC1-213ENST00000542727 OOSP1A8MZH6 123 aa-0.64□□□□□ -2.51
KNTC1-213ENST00000542727 H3BQF6 201 aa-0.64□□□□□ -2.51
KNTC1-213ENST00000542727 CCL22O00626 93 aa-0.64□□□□□ -2.51
KNTC1-213ENST00000542727 SNAPC5O75971 98 aa-0.64□□□□□ -2.51
KNTC1-213ENST00000542727 HEPN1Q6WQI6 88 aa-0.64□□□□□ -2.51
KNTC1-213ENST00000542727 MTORP42345 2549 aa-0.64□□□□□ -2.51
KNTC1-213ENST00000542727 NBPF19A0A087WUL8 3843 aa-0.64□□□□□ -2.51
KNTC1-213ENST00000542727 HTTP42858 3142 aa-0.65□□□□□ -2.51
KNTC1-213ENST00000542727 CRYM-AS1A6NIL9 109 aa-0.65□□□□□ -2.51
KNTC1-213ENST00000542727 SVBPQ8N300 66 aa-0.65□□□□□ -2.51
KNTC1-213ENST00000542727 C1orf54Q8WWF1 131 aa-0.65□□□□□ -2.51
KNTC1-213ENST00000542727 PP6455Q8WZ26 134 aa-0.65□□□□□ -2.51
KNTC1-213ENST00000542727 FMN2Q9NZ56 1722 aa-0.65□□□□□ -2.51
KNTC1-213ENST00000542727 ANKRD11Q6UB99 2663 aaPredicted RBP-0.65□□□□□ -2.51
KNTC1-213ENST00000542727 TET3O43151 1660 aa-0.65□□□□□ -2.51
KNTC1-213ENST00000542727 LAMA1P25391 3075 aa-0.66□□□□□ -2.51
KNTC1-213ENST00000542727 NKTRP30414 1462 aaKnown RBP-0.66□□□□□ -2.51
KNTC1-213ENST00000542727 MBD5Q9P267 1494 aa-0.66□□□□□ -2.51
KNTC1-213ENST00000542727 GCN1Q92616 2671 aaKnown RBP-0.66□□□□□ -2.51
KNTC1-213ENST00000542727 A0A0G2JMZ2 1700 aa-0.66□□□□□ -2.51
KNTC1-213ENST00000542727 SHROOM2Q13796 1616 aa-0.66□□□□□ -2.51
KNTC1-213ENST00000542727 KRTDAPP60985 99 aa-0.66□□□□□ -2.52
KNTC1-213ENST00000542727 GNGT1P63211 74 aa-0.66□□□□□ -2.52
KNTC1-213ENST00000542727 C6orf201Q7Z4U5 140 aa-0.66□□□□□ -2.52
KNTC1-213ENST00000542727 FAM107BQ9H098 131 aa-0.66□□□□□ -2.52
KNTC1-213ENST00000542727 DPH3P1Q9H4G8 78 aa-0.66□□□□□ -2.52
KNTC1-213ENST00000542727 SCAPERQ9BY12 1400 aa-0.66□□□□□ -2.52
KNTC1-213ENST00000542727 ROBO1Q9Y6N7 1651 aa-0.66□□□□□ -2.52
KNTC1-213ENST00000542727 ITPR2Q14571 2701 aa-0.66□□□□□ -2.52
KNTC1-213ENST00000542727 ADGRL2O95490 1459 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 PLEKHH2Q8IVE3 1493 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 NLRP1Q9C000 1473 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 LRRK2Q5S007 2527 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 TACC2O95359 2948 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 SCN7AQ01118 1682 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 A0A087WVE0 104 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 SPTY2D1-AS1A0A0U1RR47 76 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 NDUFA2O43678 99 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 MRPL34Q9BQ48 92 aaKnown RBP-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 CDKN2A-AS1Q9UH64 79 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 PKHD1L1Q86WI1 4243 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 A2ML1A8K2U0 1454 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 LAMA3Q16787 3333 aa-0.67□□□□□ -2.52
KNTC1-213ENST00000542727 TEX15Q9BXT5 2789 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms