RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 CFAP161Q6P656 301 aa8.17□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 Q8IZM0 81 aa8.17□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 J3QQQ9 107 aa8.16□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 CXCL5P42830 114 aa8.16□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 F8WDY8 70 aa8.15□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 DLEU1O43261 78 aa8.15□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 COX8AP10176 69 aa8.15□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 LGALS3P17931 250 aaKnown RBP8.15□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 C6orf223Q8N319 242 aa8.15□□□□□ -1.1
CACNA1C-IT3-201ENST00000542680 GVQW2A0A096LPI5 108 aaPredicted RBP8.14□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 IGKV2D-26A0A0A0MRZ7 120 aa8.14□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 PRSS2P07478 247 aa8.14□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 COX7B2Q8TF08 81 aa8.14□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 ORAOV1Q8WV07 137 aa8.14□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 FAT1Q14517 4588 aa8.13□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 PSCAO43653 123 aa8.13□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 Q6ZRN7 208 aaPredicted RBP8.13□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 BOD1L2Q8IYS8 172 aa8.13□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 MYMXA0A1B0GTQ4 84 aa8.12□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 TSTD3H0UI37 97 aa8.12□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 NDUFA1O15239 70 aa8.12□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 TSPEAR-AS2P59090 65 aa8.12□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 HERV-K104P63124 156 aa8.12□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 SPAG11BQ08648 103 aa8.12□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 C14orf177Q52M58 125 aa8.12□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 C1orf134Q5TEV5 83 aa8.12□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 C15orf56Q8N910 161 aa8.12□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 C2orf48Q96LS8 159 aa8.12□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 ZNF561-AS1K7EIQ3 104 aa8.11□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 KIAA0087Q14695 138 aa8.11□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 C6orf226Q5I0X4 101 aa8.11□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 SLC25A34Q6PIV7 304 aa8.11□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 TOMM7Q9P0U1 55 aa8.11□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 UQCR10Q9UDW1 63 aa8.11□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 RNF213Q63HN8 5207 aa8.1□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 ZNF815PA8K554 130 aa8.1□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 USP17L23D6RBM5 183 aa8.1□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 M0R2N4 97 aa8.1□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 PCP2Q8IVA1 136 aa8.1□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 ZNF625Q96I27 306 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 VPS13BQ7Z7G8 4022 aa8.1□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 LINC00587B1AMM8 73 aa8.09□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 INAFM2P0DMQ5 153 aa8.09□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 CKS1BP61024 79 aa8.09□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 NTN5Q8WTR8 489 aaPredicted RBP8.09□□□□□ -1.11
CACNA1C-IT3-201ENST00000542680 C14orf144Q96I85 54 aa8.08□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 MIEN1Q9BRT3 115 aa8.08□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 TRBV30A0A0K0K1B3 111 aa8.07□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 TIMM17BO60830 172 aa8.07□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 HIGD1BQ9P298 99 aa8.07□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 LRCOL1A6NCL2 159 aa8.06□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 C16orf90A8MZG2 172 aa8.06□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 COX17Q14061 63 aa8.06□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 SCGB1D4Q6XE38 83 aa8.06□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 CAMK2N2Q96S95 79 aa8.06□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 TTTY13Q9BZ97 58 aa8.06□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 A0A0J9YXY3 114 aa8.05□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 TMEM238C9JI98 176 aa8.05□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 GCSHP23434 173 aa8.05□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 CNBPP62633 177 aaKnown RBP8.05□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 CIRBPQ14011 172 aaKnown RBP8.05□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 RNF151Q2KHN1 245 aa8.05□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 HIGD2BQ4VC39 106 aa8.05□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 PRO1933Q9H354 126 aa8.05□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 SYCNQ0VAF6 134 aa8.04□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 Q6ZVH6 145 aa8.04□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 PKIGQ9Y2B9 76 aa8.04□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 A0A087WTM6 91 aa8.03□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 EPM2AB3EWF7 344 aa8.03□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 HNRNPA3P51991 378 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 MEIG1Q5JSS6 88 aa8.03□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 C2orf82Q6UX34 121 aa8.03□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 CARD19Q96LW7 228 aa8.03□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 SPANXB1Q9NS25 103 aaPredicted RBP8.03□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 ERG28Q9UKR5 140 aa8.03□□□□□ -1.12
CACNA1C-IT3-201ENST00000542680 EREGO14944 169 aa8.02□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 WFDC2Q14508 124 aa8.02□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 C2orf91Q6ZV80 131 aa8.02□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 Q8N814 137 aa8.02□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 PPDPFQ9H3Y8 114 aa8.02□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 LECT2O14960 151 aa8.01□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 TAL2Q16559 108 aa8.01□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 UNQ6190/PRO20217Q6UXQ8 127 aa8.01□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 Q6ZRU5 148 aa8.01□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 COPS9Q8WXC6 57 aa8.01□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 LINC00526Q96FQ7 95 aa8.01□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 LITAFQ99732 161 aa8.01□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 SPANXDQ9BXN6 97 aa8.01□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 SPANXCQ9NY87 97 aa8.01□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 C6orf48Q9UBA6 75 aa8.01□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 TLX1NBP0CAT3 122 aa8□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 DDTP30046 118 aa8□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 PTTG1IPP53801 180 aa8□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 C10orf25Q5T742 122 aa8□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 IFITM1P13164 125 aa7.99□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 HSD52Q0P140 79 aa7.99□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 LCE2AQ5TA79 106 aaPredicted RBP7.99□□□□□ -1.13
CACNA1C-IT3-201ENST00000542680 TP73-AS1Q9UF72 201 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms