RNA–Protein interactions for RNA: ENST00000541614.5

LRTOMT-218, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-218ENST00000541614 C7orf33Q8WU49 177 aa3.94□□□□□ -1.78
LRTOMT-218ENST00000541614 YPEL4Q96NS1 127 aa3.94□□□□□ -1.78
LRTOMT-218ENST00000541614 A0A0J9YXV3 536 aa3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 PCP4L1A6NKN8 68 aa3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 KRTAP29-1A8MX34 341 aaPredicted RBP3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 AKR1D1P51857 326 aa3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 HNRNPA3P51991 378 aaKnown RBP3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 RAB5BP61020 215 aa3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 RPL18AQ02543 176 aaKnown RBP3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 C10orf25Q5T742 122 aa3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 UNQ6190/PRO20217Q6UXQ8 127 aa3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 GEMIN7Q9H840 131 aaKnown RBP3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 C6orf48Q9UBA6 75 aa3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 CDKN2A-AS1Q9UH64 79 aa3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 TNXBP22105 4242 aa3.93□□□□□ -1.78
LRTOMT-218ENST00000541614 IGLV5-45A0A087WSX0 123 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 A0A096LNJ9 63 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 TRBV30A0A0K0K1B3 111 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 TINCRA0A1B0GVN0 87 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 HBDP02042 147 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 LINC00614P0C842 121 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 CTAG1AP78358 180 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 ODF1Q14990 250 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 PMVKQ15126 192 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 Q8IZM0 81 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 PACRGQ96M98 296 aaPredicted RBP3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 C12orf57Q99622 126 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 CST9LQ9H4G1 147 aa3.92□□□□□ -1.78
LRTOMT-218ENST00000541614 A0A1W2PNN7 141 aa3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 C5orf52A6NGY3 159 aa3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 SMIM1B2RUZ4 78 aa3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 OXTP01178 125 aa3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 PRSS2P07478 247 aa3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 SNRPEP62304 92 aaKnown RBP3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 PRR3P79522 188 aaKnown RBP3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 C9orf116Q5BN46 136 aaPredicted RBP3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 C2orf82Q6UX34 121 aa3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 Q6ZRP5 223 aa3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 LINC00469Q8N7U9 141 aa3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 TOMM7Q9P0U1 55 aa3.91□□□□□ -1.78
LRTOMT-218ENST00000541614 NDUFC2-KCTD14E9PQ53 114 aa3.9□□□□□ -1.79
LRTOMT-218ENST00000541614 IGLC3P0DOY3 106 aa3.9□□□□□ -1.79
LRTOMT-218ENST00000541614 CXCL5P42830 114 aa3.9□□□□□ -1.79
LRTOMT-218ENST00000541614 CKS1BP61024 79 aa3.9□□□□□ -1.79
LRTOMT-218ENST00000541614 S100A12P80511 92 aa3.9□□□□□ -1.79
LRTOMT-218ENST00000541614 PDZD11Q5EBL8 140 aa3.9□□□□□ -1.79
LRTOMT-218ENST00000541614 C6orf226Q5I0X4 101 aa3.9□□□□□ -1.79
LRTOMT-218ENST00000541614 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.79
LRTOMT-218ENST00000541614 F8VRH5 84 aa3.89□□□□□ -1.79
LRTOMT-218ENST00000541614 H3BRM9 83 aa3.89□□□□□ -1.79
LRTOMT-218ENST00000541614 ATP5LO75964 103 aa3.89□□□□□ -1.79
LRTOMT-218ENST00000541614 S100A6P06703 90 aa3.89□□□□□ -1.79
LRTOMT-218ENST00000541614 PMCHL1Q16048 86 aa3.89□□□□□ -1.79
LRTOMT-218ENST00000541614 GAGE2EQ4V326 116 aa3.89□□□□□ -1.79
LRTOMT-218ENST00000541614 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
LRTOMT-218ENST00000541614 COX7B2Q8TF08 81 aa3.89□□□□□ -1.79
LRTOMT-218ENST00000541614 CHCHD1Q96BP2 118 aaKnown RBP3.89□□□□□ -1.79
LRTOMT-218ENST00000541614 GAGE2DQ9UEU5 116 aa3.89□□□□□ -1.79
LRTOMT-218ENST00000541614 FAM168BA1KXE4 195 aa3.88□□□□□ -1.79
LRTOMT-218ENST00000541614 SPINK8P0C7L1 97 aa3.88□□□□□ -1.79
LRTOMT-218ENST00000541614 SMIM6P0DI80 62 aa3.88□□□□□ -1.79
LRTOMT-218ENST00000541614 ZNF22P17026 224 aaPredicted RBP3.88□□□□□ -1.79
LRTOMT-218ENST00000541614 C9orf129Q5T035 196 aaKnown RBP3.88□□□□□ -1.79
LRTOMT-218ENST00000541614 SFTA2Q6UW10 78 aa3.88□□□□□ -1.79
LRTOMT-218ENST00000541614 PHF5AQ7RTV0 110 aaKnown RBP3.88□□□□□ -1.79
LRTOMT-218ENST00000541614 IGLV5-39A0A0G2JS06 123 aa3.87□□□□□ -1.79
LRTOMT-218ENST00000541614 M0QXV9 152 aa3.87□□□□□ -1.79
LRTOMT-218ENST00000541614 HSBP1O75506 76 aa3.87□□□□□ -1.79
LRTOMT-218ENST00000541614 TRGC2P03986 189 aa3.87□□□□□ -1.79
LRTOMT-218ENST00000541614 NDUFA6P56556 154 aa3.87□□□□□ -1.79
LRTOMT-218ENST00000541614 SPINK6Q6UWN8 80 aa3.87□□□□□ -1.79
LRTOMT-218ENST00000541614 FAM19A5Q7Z5A7 132 aaPredicted RBP3.87□□□□□ -1.79
LRTOMT-218ENST00000541614 BAGE3Q86Y29 109 aa3.87□□□□□ -1.79
LRTOMT-218ENST00000541614 KRTAP7-1Q8IUC3 87 aa3.87□□□□□ -1.79
LRTOMT-218ENST00000541614 PSORS1C2Q9UIG4 136 aa3.87□□□□□ -1.79
LRTOMT-218ENST00000541614 TRAV12-1A0A0B4J245 112 aa3.86□□□□□ -1.79
LRTOMT-218ENST00000541614 C11orf86A6NJI1 115 aa3.86□□□□□ -1.79
LRTOMT-218ENST00000541614 LINC00587B1AMM8 73 aa3.86□□□□□ -1.79
LRTOMT-218ENST00000541614 SRSF9Q13242 221 aaKnown RBP eCLIP3.86□□□□□ -1.79
LRTOMT-218ENST00000541614 IFI27L1Q96BM0 104 aa3.86□□□□□ -1.79
LRTOMT-218ENST00000541614 XAGE1AQ9HD64 81 aa3.86□□□□□ -1.79
LRTOMT-218ENST00000541614 CHTOPQ9Y3Y2 248 aaKnown RBP3.86□□□□□ -1.79
LRTOMT-218ENST00000541614 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
LRTOMT-218ENST00000541614 LINC00310P59036 64 aa3.85□□□□□ -1.79
LRTOMT-218ENST00000541614 C1orf137Q5JT78 98 aa3.85□□□□□ -1.79
LRTOMT-218ENST00000541614 TMEM170BQ5T4T1 132 aa3.85□□□□□ -1.79
LRTOMT-218ENST00000541614 SERTAD4-AS1Q5TG53 156 aa3.85□□□□□ -1.79
LRTOMT-218ENST00000541614 KRTAP11-1Q8IUC1 163 aa3.85□□□□□ -1.79
LRTOMT-218ENST00000541614 FAM19A2Q8N3H0 131 aa3.85□□□□□ -1.79
LRTOMT-218ENST00000541614 HIST1H2BKO60814 126 aa3.84□□□□□ -1.79
LRTOMT-218ENST00000541614 SERF1AO75920 110 aa3.84□□□□□ -1.79
LRTOMT-218ENST00000541614 IGLV7-43P04211 117 aa3.84□□□□□ -1.79
LRTOMT-218ENST00000541614 HIST1H2BJP06899 126 aa3.84□□□□□ -1.79
LRTOMT-218ENST00000541614 HIST1H2BOP23527 126 aa3.84□□□□□ -1.79
LRTOMT-218ENST00000541614 HIST1H2BBP33778 126 aa3.84□□□□□ -1.79
LRTOMT-218ENST00000541614 HIST1H2BDP58876 126 aa3.84□□□□□ -1.79
LRTOMT-218ENST00000541614 HIST1H2BCP62807 126 aa3.84□□□□□ -1.79
LRTOMT-218ENST00000541614 UBE2BP63146 152 aa3.84□□□□□ -1.79
LRTOMT-218ENST00000541614 HIST2H2BEQ16778 126 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms