RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 SLC7A5P1Q8MH63 180 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 LINC01561Q8N1V8 128 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 Q8N8P6 123 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 OR10D4PQ8NGN7 298 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 C7orf33Q8WU49 177 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 C2orf48Q96LS8 159 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 LRP1BQ9NZR2 4599 aa3.62□□□□□ -1.83
SUDS3-202ENST00000541280 SEC11AP67812 179 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 HAMPP81172 84 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 COX6A2Q02221 97 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 HIGD2BQ4VC39 106 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 SPACA4Q8TDM5 124 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 CARD19Q96LW7 228 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 C2orf88Q9BSF0 95 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 GNB1LQ9BYB4 327 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 VCX2Q9H322 139 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 PLAC8Q9NZF1 115 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 CYSLTR1Q9Y271 337 aa3.61□□□□□ -1.83
SUDS3-202ENST00000541280 DYNC1H1Q14204 4646 aaKnown RBP3.61□□□□□ -1.83
SUDS3-202ENST00000541280 TGIF2-C20orf24A0A0A6YYL0 155 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 IGHV3OR16-9A0A0B4J2B5 98 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 LOC107984640A0A0U1RRK4 108 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 LOC389332A0A1B0GUA5 103 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 MT-ND6P03923 174 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 IFITM2Q01629 132 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 RHEBQ15382 184 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 MAJINQ3KP22 176 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 TEX43Q6ZNM6 134 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 Q6ZRU5 148 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 Q6ZUT4 128 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 TMEM141Q96I45 108 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 CAMK2N2Q96S95 79 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 DNAH5Q8TE73 4624 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
SUDS3-202ENST00000541280 RYR1P21817 5038 aa3.59□□□□□ -1.83
SUDS3-202ENST00000541280 A0A087WZ39 114 aa3.59□□□□□ -1.83
SUDS3-202ENST00000541280 NDUFA1O15239 70 aa3.59□□□□□ -1.83
SUDS3-202ENST00000541280 RPL39P62891 51 aaKnown RBP3.59□□□□□ -1.83
SUDS3-202ENST00000541280 NDUFA5Q16718 116 aa3.59□□□□□ -1.83
SUDS3-202ENST00000541280 C10orf91Q5T1B1 145 aa3.59□□□□□ -1.83
SUDS3-202ENST00000541280 C2orf66Q6UXQ4 117 aa3.59□□□□□ -1.83
SUDS3-202ENST00000541280 C5orf38Q86SI9 138 aa3.59□□□□□ -1.83
SUDS3-202ENST00000541280 COMMD7Q86VX2 200 aa3.59□□□□□ -1.83
SUDS3-202ENST00000541280 Q8N377 158 aa3.59□□□□□ -1.83
SUDS3-202ENST00000541280 MRPL35Q9NZE8 188 aaKnown RBP3.59□□□□□ -1.83
SUDS3-202ENST00000541280 CARHSP1Q9Y2V2 147 aaKnown RBP3.59□□□□□ -1.83
SUDS3-202ENST00000541280 HSPG2P98160 4391 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 IGLV4-3A0A075B6K6 122 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 IGIPA6NJ69 53 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 TLX1NBP0CAT3 122 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 ADCYAP1P18509 176 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
SUDS3-202ENST00000541280 HERVK_113P63121 156 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 SPAG11BQ08648 103 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 LINC00242Q5T6M2 205 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 Q6ZRP5 223 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 ERASQ7Z444 233 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 FAM19A3Q7Z5A8 133 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 ORAOV1Q8WV07 137 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 AMELXQ99217 191 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 TIMM17AQ99595 171 aa3.58□□□□□ -1.84
SUDS3-202ENST00000541280 IGKV2-24A0A0C4DH68 120 aa3.57□□□□□ -1.84
SUDS3-202ENST00000541280 TRBV30A0A0K0K1B3 111 aa3.57□□□□□ -1.84
SUDS3-202ENST00000541280 LINC01546A6NGU7 62 aa3.57□□□□□ -1.84
SUDS3-202ENST00000541280 PANO1I0J062 215 aa3.57□□□□□ -1.84
SUDS3-202ENST00000541280 SNAPINO95295 136 aa3.57□□□□□ -1.84
SUDS3-202ENST00000541280 UBE2D1P51668 147 aa3.57□□□□□ -1.84
SUDS3-202ENST00000541280 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
SUDS3-202ENST00000541280 RNASE13Q5GAN3 156 aaKnown RBP3.57□□□□□ -1.84
SUDS3-202ENST00000541280 SVBPQ8N300 66 aa3.57□□□□□ -1.84
SUDS3-202ENST00000541280 FAM104AQ969W3 186 aa3.57□□□□□ -1.84
SUDS3-202ENST00000541280 TOMM6Q96B49 74 aa3.57□□□□□ -1.84
SUDS3-202ENST00000541280 PACRGQ96M98 296 aaPredicted RBP3.57□□□□□ -1.84
SUDS3-202ENST00000541280 GEMIN7Q9H840 131 aaKnown RBP3.57□□□□□ -1.84
SUDS3-202ENST00000541280 A0A096LNI7 61 aa3.56□□□□□ -1.84
SUDS3-202ENST00000541280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.56□□□□□ -1.84
SUDS3-202ENST00000541280 CHTF8P0CG12 524 aa3.56□□□□□ -1.84
SUDS3-202ENST00000541280 RAB5BP61020 215 aa3.56□□□□□ -1.84
SUDS3-202ENST00000541280 CKS1BP61024 79 aa3.56□□□□□ -1.84
SUDS3-202ENST00000541280 FABP9Q0Z7S8 132 aa3.56□□□□□ -1.84
SUDS3-202ENST00000541280 C6orf226Q5I0X4 101 aa3.56□□□□□ -1.84
SUDS3-202ENST00000541280 FA2HQ7L5A8 372 aa3.56□□□□□ -1.84
SUDS3-202ENST00000541280 LINC00526Q96FQ7 95 aa3.56□□□□□ -1.84
SUDS3-202ENST00000541280 SCGB3A1Q96QR1 104 aa3.56□□□□□ -1.84
SUDS3-202ENST00000541280 ALKBH7Q9BT30 221 aaPredicted RBP3.56□□□□□ -1.84
SUDS3-202ENST00000541280 SMCO4Q9NRQ5 59 aa3.56□□□□□ -1.84
SUDS3-202ENST00000541280 LOC105371267A0A1B0GV96 52 aa3.55□□□□□ -1.84
SUDS3-202ENST00000541280 TINCRA0A1B0GVN0 87 aa3.55□□□□□ -1.84
SUDS3-202ENST00000541280 A8MU10 97 aa3.55□□□□□ -1.84
SUDS3-202ENST00000541280 CXCL5P42830 114 aa3.55□□□□□ -1.84
SUDS3-202ENST00000541280 RPL18AQ02543 176 aaKnown RBP3.55□□□□□ -1.84
SUDS3-202ENST00000541280 KIAA0087Q14695 138 aa3.55□□□□□ -1.84
SUDS3-202ENST00000541280 SPINK6Q6UWN8 80 aa3.55□□□□□ -1.84
SUDS3-202ENST00000541280 Q8IZM0 81 aa3.55□□□□□ -1.84
SUDS3-202ENST00000541280 TRAPPC1Q9Y5R8 145 aa3.55□□□□□ -1.84
SUDS3-202ENST00000541280 NDUFC2-KCTD14E9PQ53 114 aa3.54□□□□□ -1.84
SUDS3-202ENST00000541280 H3BRM9 83 aa3.54□□□□□ -1.84
SUDS3-202ENST00000541280 APOC3P02656 99 aa3.54□□□□□ -1.84
SUDS3-202ENST00000541280 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
SUDS3-202ENST00000541280 LINC00614P0C842 121 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms