RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 TEX43Q6ZNM6 134 aa15.76■□□□□ 0.11
CHFR-218ENST00000540963 CTDSP1Q9GZU7 261 aa15.76■□□□□ 0.11
CHFR-218ENST00000540963 KIAA1644Q3SXP7 199 aa15.75■□□□□ 0.11
CHFR-218ENST00000540963 FAM19A3Q7Z5A8 133 aa15.75■□□□□ 0.11
CHFR-218ENST00000540963 TYMSOSQ8TAI1 123 aa15.75■□□□□ 0.11
CHFR-218ENST00000540963 TP73-AS1Q9UF72 201 aa15.75■□□□□ 0.11
CHFR-218ENST00000540963 TMEM218A2RU14 115 aa15.74■□□□□ 0.11
CHFR-218ENST00000540963 ORMDL2Q53FV1 153 aa15.73■□□□□ 0.11
CHFR-218ENST00000540963 PRSS2P07478 247 aa15.72■□□□□ 0.11
CHFR-218ENST00000540963 VCX2Q9H322 139 aa15.72■□□□□ 0.11
CHFR-218ENST00000540963 CKS1BP61024 79 aa15.71■□□□□ 0.11
CHFR-218ENST00000540963 Q6ZN92 141 aa15.71■□□□□ 0.11
CHFR-218ENST00000540963 K7EMI3 77 aa15.7■□□□□ 0.1
CHFR-218ENST00000540963 BCE1O60756 84 aa15.7■□□□□ 0.1
CHFR-218ENST00000540963 NPSP0C0P6 89 aa15.7■□□□□ 0.1
CHFR-218ENST00000540963 C2orf88Q9BSF0 95 aa15.7■□□□□ 0.1
CHFR-218ENST00000540963 NXT2Q9NPJ8 142 aaKnown RBP15.7■□□□□ 0.1
CHFR-218ENST00000540963 UQCC3Q6UW78 93 aa15.69■□□□□ 0.1
CHFR-218ENST00000540963 Q8IZM0 81 aa15.69■□□□□ 0.1
CHFR-218ENST00000540963 MRPL55Q7Z7F7 128 aaKnown RBP15.68■□□□□ 0.1
CHFR-218ENST00000540963 LINC00469Q8N7U9 141 aa15.68■□□□□ 0.1
CHFR-218ENST00000540963 C6orf226Q5I0X4 101 aa15.67■□□□□ 0.1
CHFR-218ENST00000540963 TOMM6Q96B49 74 aa15.67■□□□□ 0.1
CHFR-218ENST00000540963 XAGE1AQ9HD64 81 aa15.67■□□□□ 0.1
CHFR-218ENST00000540963 CDKN2A-AS1Q9UH64 79 aa15.66■□□□□ 0.1
CHFR-218ENST00000540963 TPRXLQ17RH7 258 aa15.65■□□□□ 0.1
CHFR-218ENST00000540963 TIMM17AQ99595 171 aa15.65■□□□□ 0.1
CHFR-218ENST00000540963 TOMM7Q9P0U1 55 aa15.65■□□□□ 0.1
CHFR-218ENST00000540963 LINC01546A6NGU7 62 aa15.63■□□□□ 0.09
CHFR-218ENST00000540963 CTAG1AP78358 180 aa15.63■□□□□ 0.09
CHFR-218ENST00000540963 ALKBH7Q9BT30 221 aaPredicted RBP15.63■□□□□ 0.09
CHFR-218ENST00000540963 TRAV9-1A0A075B6T8 112 aa15.62■□□□□ 0.09
CHFR-218ENST00000540963 SEC11CQ9BY50 192 aa15.62■□□□□ 0.09
CHFR-218ENST00000540963 F8VRH5 84 aa15.61■□□□□ 0.09
CHFR-218ENST00000540963 CDIP1Q9H305 208 aa15.61■□□□□ 0.09
CHFR-218ENST00000540963 FAM229BQ4G0N7 80 aa15.6■□□□□ 0.09
CHFR-218ENST00000540963 ERASQ7Z444 233 aa15.6■□□□□ 0.09
CHFR-218ENST00000540963 GNB1LQ9BYB4 327 aa15.6■□□□□ 0.09
CHFR-218ENST00000540963 MUC17Q685J3 4493 aa15.59■□□□□ 0.09
CHFR-218ENST00000540963 KRTAP13-2Q52LG2 175 aa15.59■□□□□ 0.09
CHFR-218ENST00000540963 HERVK_113P63121 156 aa15.58■□□□□ 0.08
CHFR-218ENST00000540963 SEC11AP67812 179 aa15.58■□□□□ 0.08
CHFR-218ENST00000540963 C10orf91Q5T1B1 145 aa15.58■□□□□ 0.08
CHFR-218ENST00000540963 LINC00304Q8N9R0 145 aa15.58■□□□□ 0.08
CHFR-218ENST00000540963 CXCL5P42830 114 aa15.57■□□□□ 0.08
CHFR-218ENST00000540963 LINC00167Q96N53 147 aa15.57■□□□□ 0.08
CHFR-218ENST00000540963 SCGB3A1Q96QR1 104 aa15.57■□□□□ 0.08
CHFR-218ENST00000540963 KRTAP13-1Q8IUC0 172 aa15.56■□□□□ 0.08
CHFR-218ENST00000540963 RETNLBQ9BQ08 111 aa15.56■□□□□ 0.08
CHFR-218ENST00000540963 PAPPA-AS1Q5QFB9 102 aa15.55■□□□□ 0.08
CHFR-218ENST00000540963 COMMD7Q86VX2 200 aa15.55■□□□□ 0.08
CHFR-218ENST00000540963 ANAPC11Q9NYG5 84 aa15.55■□□□□ 0.08
CHFR-218ENST00000540963 SMIM1B2RUZ4 78 aa15.54■□□□□ 0.08
CHFR-218ENST00000540963 G0S2P27469 103 aa15.54■□□□□ 0.08
CHFR-218ENST00000540963 IGLV7-46A0A075B6I9 117 aa15.53■□□□□ 0.08
CHFR-218ENST00000540963 IGLV5-45A0A087WSX0 123 aa15.53■□□□□ 0.08
CHFR-218ENST00000540963 RPL37AP8A6NKH3 93 aa15.53■□□□□ 0.08
CHFR-218ENST00000540963 CST9LQ9H4G1 147 aa15.53■□□□□ 0.08
CHFR-218ENST00000540963 GEMIN7Q9H840 131 aaKnown RBP15.53■□□□□ 0.08
CHFR-218ENST00000540963 IGLV5-37A0A075B6J1 123 aa15.51■□□□□ 0.07
CHFR-218ENST00000540963 TINCRA0A1B0GVN0 87 aa15.51■□□□□ 0.07
CHFR-218ENST00000540963 UBE2AP49459 152 aa15.51■□□□□ 0.07
CHFR-218ENST00000540963 URB1-AS1Q96HZ7 61 aa15.51■□□□□ 0.07
CHFR-218ENST00000540963 S100PP25815 95 aa15.5■□□□□ 0.07
CHFR-218ENST00000540963 MRPL18Q9H0U6 180 aaKnown RBP15.5■□□□□ 0.07
CHFR-218ENST00000540963 A0A096LNJ9 63 aa15.49■□□□□ 0.07
CHFR-218ENST00000540963 FABP9Q0Z7S8 132 aa15.48■□□□□ 0.07
CHFR-218ENST00000540963 IGKV2D-26A0A0A0MRZ7 120 aa15.47■□□□□ 0.07
CHFR-218ENST00000540963 PDZD11Q5EBL8 140 aa15.47■□□□□ 0.07
CHFR-218ENST00000540963 RPS10P5Q9NQ39 176 aa15.46■□□□□ 0.07
CHFR-218ENST00000540963 SPINK8P0C7L1 97 aa15.45■□□□□ 0.06
CHFR-218ENST00000540963 COX7B2Q8TF08 81 aa15.45■□□□□ 0.06
CHFR-218ENST00000540963 GAGE10A6NGK3 116 aa15.44■□□□□ 0.06
CHFR-218ENST00000540963 PMVKQ15126 192 aa15.44■□□□□ 0.06
CHFR-218ENST00000540963 COX19Q49B96 90 aa15.44■□□□□ 0.06
CHFR-218ENST00000540963 NKAPP1Q8N9T2 125 aa15.44■□□□□ 0.06
CHFR-218ENST00000540963 RHEBQ15382 184 aa15.43■□□□□ 0.06
CHFR-218ENST00000540963 FA2HQ7L5A8 372 aa15.42■□□□□ 0.06
CHFR-218ENST00000540963 LINC01549A6NIU2 74 aa15.41■□□□□ 0.06
CHFR-218ENST00000540963 PPDPFQ9H3Y8 114 aa15.4■□□□□ 0.06
CHFR-218ENST00000540963 C18orf32Q8TCD1 76 aa15.39■□□□□ 0.05
CHFR-218ENST00000540963 IGLC3P0DOY3 106 aa15.37■□□□□ 0.05
CHFR-218ENST00000540963 RAB5BP61020 215 aa15.37■□□□□ 0.05
CHFR-218ENST00000540963 SMCO4Q9NRQ5 59 aa15.37■□□□□ 0.05
CHFR-218ENST00000540963 IGLV5-39A0A0G2JS06 123 aa15.36■□□□□ 0.05
CHFR-218ENST00000540963 PMCHL1Q16048 86 aa15.35■□□□□ 0.05
CHFR-218ENST00000540963 SPAG11AQ6PDA7 123 aa15.35■□□□□ 0.05
CHFR-218ENST00000540963 IGKV2-28A0A075B6P5 120 aa15.34■□□□□ 0.05
CHFR-218ENST00000540963 IGKV2D-28P01615 120 aa15.34■□□□□ 0.05
CHFR-218ENST00000540963 LINC00614P0C842 121 aa15.34■□□□□ 0.05
CHFR-218ENST00000540963 ZNF22P17026 224 aaPredicted RBP15.34■□□□□ 0.05
CHFR-218ENST00000540963 FP248Q71RG6 208 aaPredicted RBP15.34■□□□□ 0.05
CHFR-218ENST00000540963 TRAPPC1Q9Y5R8 145 aa15.34■□□□□ 0.05
CHFR-218ENST00000540963 PRLHP81277 87 aa15.32■□□□□ 0.04
CHFR-218ENST00000540963 LCE2DQ5TA82 110 aaPredicted RBP15.31■□□□□ 0.04
CHFR-218ENST00000540963 SCO1O75880 301 aa15.3■□□□□ 0.04
CHFR-218ENST00000540963 FAM19A1Q7Z5A9 133 aa15.3■□□□□ 0.04
CHFR-218ENST00000540963 PLEKHB2Q96CS7 222 aa15.3■□□□□ 0.04
CHFR-218ENST00000540963 YPEL4Q96NS1 127 aa15.3■□□□□ 0.04
CHFR-218ENST00000540963 TMEM126AQ9H061 195 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms