RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	PHF5A	Q7RTV0	110 aa	Known RBP	12.34	□□□□□ -0.43
RAP1B-222	ENST00000540781		Q8IZM0	81 aa		12.34	□□□□□ -0.43
RAP1B-222	ENST00000540781	LINC00469	Q8N7U9	141 aa		12.33	□□□□□ -0.44
RAP1B-222	ENST00000540781	FAM168B	A1KXE4	195 aa		12.32	□□□□□ -0.44
RAP1B-222	ENST00000540781	NDUFC2-KCTD14	E9PQ53	114 aa		12.32	□□□□□ -0.44
RAP1B-222	ENST00000540781	SPINK6	Q6UWN8	80 aa		12.32	□□□□□ -0.44
RAP1B-222	ENST00000540781	CST9L	Q9H4G1	147 aa		12.32	□□□□□ -0.44
RAP1B-222	ENST00000540781	TINCR	A0A1B0GVN0	87 aa		12.31	□□□□□ -0.44
RAP1B-222	ENST00000540781	C18orf32	Q8TCD1	76 aa		12.31	□□□□□ -0.44
RAP1B-222	ENST00000540781	MT1HL1	P0DM35	61 aa		12.3	□□□□□ -0.44
RAP1B-222	ENST00000540781	PMVK	Q15126	192 aa		12.3	□□□□□ -0.44
RAP1B-222	ENST00000540781	SERTAD4-AS1	Q5TG53	156 aa		12.3	□□□□□ -0.44
RAP1B-222	ENST00000540781	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	12.3	□□□□□ -0.44
RAP1B-222	ENST00000540781	PSORS1C2	Q9UIG4	136 aa		12.3	□□□□□ -0.44
RAP1B-222	ENST00000540781	LINC00614	P0C842	121 aa		12.29	□□□□□ -0.44
RAP1B-222	ENST00000540781	SRSF9	Q13242	221 aa	Known RBP eCLIP	12.29	□□□□□ -0.44
RAP1B-222	ENST00000540781	URB1-AS1	Q96HZ7	61 aa		12.29	□□□□□ -0.44
RAP1B-222	ENST00000540781	IGLV5-45	A0A087WSX0	123 aa		12.28	□□□□□ -0.44
RAP1B-222	ENST00000540781	SMIM1	B2RUZ4	78 aa		12.28	□□□□□ -0.44
RAP1B-222	ENST00000540781	PDZD11	Q5EBL8	140 aa		12.27	□□□□□ -0.45
RAP1B-222	ENST00000540781		A0A096LNJ9	63 aa		12.26	□□□□□ -0.45
RAP1B-222	ENST00000540781		F8VRH5	84 aa		12.26	□□□□□ -0.45
RAP1B-222	ENST00000540781	CXCL5	P42830	114 aa		12.26	□□□□□ -0.45
RAP1B-222	ENST00000540781	C1orf137	Q5JT78	98 aa		12.26	□□□□□ -0.45
RAP1B-222	ENST00000540781	C9orf129	Q5T035	196 aa	Known RBP	12.26	□□□□□ -0.45
RAP1B-222	ENST00000540781	HBD	P02042	147 aa		12.25	□□□□□ -0.45
RAP1B-222	ENST00000540781	NDUFA6	P56556	154 aa		12.25	□□□□□ -0.45
RAP1B-222	ENST00000540781	RAB5B	P61020	215 aa		12.25	□□□□□ -0.45
RAP1B-222	ENST00000540781	REG3G	Q6UW15	175 aa		12.25	□□□□□ -0.45
RAP1B-222	ENST00000540781	KRTAP7-1	Q8IUC3	87 aa		12.25	□□□□□ -0.45
RAP1B-222	ENST00000540781	COX7B2	Q8TF08	81 aa		12.25	□□□□□ -0.45
RAP1B-222	ENST00000540781	LINC01600	Q96MT4	127 aa		12.25	□□□□□ -0.45
RAP1B-222	ENST00000540781		M0QXV9	152 aa		12.24	□□□□□ -0.45
RAP1B-222	ENST00000540781	SPINK8	P0C7L1	97 aa		12.24	□□□□□ -0.45
RAP1B-222	ENST00000540781	YPEL4	Q96NS1	127 aa		12.24	□□□□□ -0.45
RAP1B-222	ENST00000540781	PMCHL1	Q16048	86 aa		12.23	□□□□□ -0.45
RAP1B-222	ENST00000540781		H3BRM9	83 aa		12.22	□□□□□ -0.45
RAP1B-222	ENST00000540781	KRTAP11-1	Q8IUC1	163 aa		12.22	□□□□□ -0.45
RAP1B-222	ENST00000540781	IGLC3	P0DOY3	106 aa		12.21	□□□□□ -0.45
RAP1B-222	ENST00000540781	UBE2B	P63146	152 aa		12.21	□□□□□ -0.45
RAP1B-222	ENST00000540781	XAGE1A	Q9HD64	81 aa		12.21	□□□□□ -0.45
RAP1B-222	ENST00000540781	ATP5L	O75964	103 aa		12.2	□□□□□ -0.46
RAP1B-222	ENST00000540781	IGLV7-43	P04211	117 aa		12.19	□□□□□ -0.46
RAP1B-222	ENST00000540781	CBLN2	Q8IUK8	224 aa		12.18	□□□□□ -0.46
RAP1B-222	ENST00000540781	PLA2G2D	Q9UNK4	145 aa		12.18	□□□□□ -0.46
RAP1B-222	ENST00000540781	ZNF22	P17026	224 aa	Predicted RBP	12.17	□□□□□ -0.46
RAP1B-222	ENST00000540781	BAGE3	Q86Y29	109 aa		12.17	□□□□□ -0.46
RAP1B-222	ENST00000540781	HMCN2	Q8NDA2	5059 aa		12.17	□□□□□ -0.46
RAP1B-222	ENST00000540781	CHCHD1	Q96BP2	118 aa	Known RBP	12.15	□□□□□ -0.46
RAP1B-222	ENST00000540781	C22orf24	Q9Y442	160 aa		12.15	□□□□□ -0.46
RAP1B-222	ENST00000540781	IGLV5-39	A0A0G2JS06	123 aa		12.14	□□□□□ -0.47
RAP1B-222	ENST00000540781	KRTAP10-8	P60410	259 aa		12.14	□□□□□ -0.47
RAP1B-222	ENST00000540781	DIRC1	Q969H9	104 aa		12.14	□□□□□ -0.47
RAP1B-222	ENST00000540781	C11orf86	A6NJI1	115 aa		12.13	□□□□□ -0.47
RAP1B-222	ENST00000540781	LBH	Q53QV2	105 aa	Predicted RBP	12.13	□□□□□ -0.47
RAP1B-222	ENST00000540781	SLC7A5P1	Q8MH63	180 aa		12.13	□□□□□ -0.47
RAP1B-222	ENST00000540781	TNXB	P22105	4242 aa		12.11	□□□□□ -0.47
RAP1B-222	ENST00000540781	TMEM170B	Q5T4T1	132 aa		12.11	□□□□□ -0.47
RAP1B-222	ENST00000540781	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.11	□□□□□ -0.47
RAP1B-222	ENST00000540781	ODF1	Q14990	250 aa		12.1	□□□□□ -0.47
RAP1B-222	ENST00000540781	TP73-AS1	Q9UF72	201 aa		12.1	□□□□□ -0.47
RAP1B-222	ENST00000540781		H0Y9J4	135 aa		12.09	□□□□□ -0.47
RAP1B-222	ENST00000540781	MRPL55	Q7Z7F7	128 aa	Known RBP	12.09	□□□□□ -0.47
RAP1B-222	ENST00000540781	IFI27L1	Q96BM0	104 aa		12.09	□□□□□ -0.47
RAP1B-222	ENST00000540781	HSBP1	O75506	76 aa		12.08	□□□□□ -0.48
RAP1B-222	ENST00000540781	TRGC2	P03986	189 aa		12.08	□□□□□ -0.48
RAP1B-222	ENST00000540781	TRAV12-1	A0A0B4J245	112 aa		12.07	□□□□□ -0.48
RAP1B-222	ENST00000540781	NUPR1	O60356	82 aa		12.07	□□□□□ -0.48
RAP1B-222	ENST00000540781	PFN2	P35080	140 aa		12.07	□□□□□ -0.48
RAP1B-222	ENST00000540781	FAM19A2	Q8N3H0	131 aa		12.06	□□□□□ -0.48
RAP1B-222	ENST00000540781	ZNF625	Q96I27	306 aa	Predicted RBP	12.05	□□□□□ -0.48
RAP1B-222	ENST00000540781	LINC00167	Q96N53	147 aa		12.05	□□□□□ -0.48
RAP1B-222	ENST00000540781	ERG28	Q9UKR5	140 aa		12.05	□□□□□ -0.48
RAP1B-222	ENST00000540781	IGLV5-37	A0A075B6J1	123 aa		12.03	□□□□□ -0.48
RAP1B-222	ENST00000540781	NKAPP1	Q8N9T2	125 aa		12.03	□□□□□ -0.48
RAP1B-222	ENST00000540781	TMEM223	A0PJW6	202 aa		12.02	□□□□□ -0.49
RAP1B-222	ENST00000540781	GAGE10	A6NGK3	116 aa		12.02	□□□□□ -0.49
RAP1B-222	ENST00000540781	RPL37AP8	A6NKH3	93 aa		12.02	□□□□□ -0.49
RAP1B-222	ENST00000540781	ZNF861P	O60384	105 aa		12.02	□□□□□ -0.49
RAP1B-222	ENST00000540781	SFTA2	Q6UW10	78 aa		12.02	□□□□□ -0.49
RAP1B-222	ENST00000540781	COX17	Q14061	63 aa		12.01	□□□□□ -0.49
RAP1B-222	ENST00000540781	PRR26	Q8N8Z3	221 aa		12.01	□□□□□ -0.49
RAP1B-222	ENST00000540781	SERF1A	O75920	110 aa		12	□□□□□ -0.49
RAP1B-222	ENST00000540781	SND1-IT1	Q9HBX3	110 aa		12	□□□□□ -0.49
RAP1B-222	ENST00000540781	COLCA2	A8K830	154 aa		11.99	□□□□□ -0.49
RAP1B-222	ENST00000540781	BCE1	O60756	84 aa		11.98	□□□□□ -0.49
RAP1B-222	ENST00000540781	KRTAP1-4	P0C5Y4	121 aa		11.98	□□□□□ -0.49
RAP1B-222	ENST00000540781	LINC00310	P59036	64 aa		11.98	□□□□□ -0.49
RAP1B-222	ENST00000540781		H0Y8G0	127 aa		11.97	□□□□□ -0.49
RAP1B-222	ENST00000540781	SCO1	O75880	301 aa		11.97	□□□□□ -0.49
RAP1B-222	ENST00000540781	LEPROTL1	O95214	131 aa		11.97	□□□□□ -0.49
RAP1B-222	ENST00000540781	IGLV1-50	A0A075B6I6	118 aa		11.96	□□□□□ -0.49
RAP1B-222	ENST00000540781	VPREB1	P12018	145 aa		11.96	□□□□□ -0.49
RAP1B-222	ENST00000540781	RPL28	P46779	137 aa	Known RBP	11.96	□□□□□ -0.49
RAP1B-222	ENST00000540781	LINC00158	P58513	81 aa		11.96	□□□□□ -0.49
RAP1B-222	ENST00000540781	RPL24	P83731	157 aa	Known RBP	11.95	□□□□□ -0.5
RAP1B-222	ENST00000540781	IGKV2-28	A0A075B6P5	120 aa		11.93	□□□□□ -0.5
RAP1B-222	ENST00000540781		A0A0U1RRA0	63 aa		11.93	□□□□□ -0.5
RAP1B-222	ENST00000540781	IGKV2D-28	P01615	120 aa		11.93	□□□□□ -0.5
RAP1B-222	ENST00000540781	FABP4	P15090	132 aa		11.93	□□□□□ -0.5

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