RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 NPSP0C0P6 89 aa7.35□□□□□ -1.23
COPS7A-211ENST00000540408 HERVK_113P63121 156 aa7.35□□□□□ -1.23
COPS7A-211ENST00000540408 ORMDL2Q53FV1 153 aa7.34□□□□□ -1.23
COPS7A-211ENST00000540408 PAPPA-AS1Q5QFB9 102 aa7.34□□□□□ -1.23
COPS7A-211ENST00000540408 ZC2HC1BQ5TFG8 222 aa7.34□□□□□ -1.23
COPS7A-211ENST00000540408 AMELXQ99217 191 aa7.34□□□□□ -1.23
COPS7A-211ENST00000540408 GEMIN7Q9H840 131 aaKnown RBP7.34□□□□□ -1.23
COPS7A-211ENST00000540408 C9JQL5 133 aa7.33□□□□□ -1.24
COPS7A-211ENST00000540408 G0S2P27469 103 aa7.33□□□□□ -1.24
COPS7A-211ENST00000540408 CXCL5P42830 114 aa7.33□□□□□ -1.24
COPS7A-211ENST00000540408 LINC00173Q6ZV60 143 aa7.33□□□□□ -1.24
COPS7A-211ENST00000540408 FAM19A3Q7Z5A8 133 aa7.33□□□□□ -1.24
COPS7A-211ENST00000540408 Q8N8P6 123 aa7.33□□□□□ -1.24
COPS7A-211ENST00000540408 RPL37AP8A6NKH3 93 aa7.32□□□□□ -1.24
COPS7A-211ENST00000540408 K7EMI3 77 aa7.32□□□□□ -1.24
COPS7A-211ENST00000540408 LINC00167Q96N53 147 aa7.32□□□□□ -1.24
COPS7A-211ENST00000540408 CDIP1Q9H305 208 aa7.32□□□□□ -1.24
COPS7A-211ENST00000540408 hCG_2014768A0A024R1R8 64 aa7.31□□□□□ -1.24
COPS7A-211ENST00000540408 UBE2AP49459 152 aa7.31□□□□□ -1.24
COPS7A-211ENST00000540408 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
COPS7A-211ENST00000540408 CDKN2A-AS1Q9UH64 79 aa7.31□□□□□ -1.24
COPS7A-211ENST00000540408 IGIPA6NJ69 53 aa7.3□□□□□ -1.24
COPS7A-211ENST00000540408 SRSF3P84103 164 aaKnown RBP7.3□□□□□ -1.24
COPS7A-211ENST00000540408 LINC00304Q8N9R0 145 aa7.3□□□□□ -1.24
COPS7A-211ENST00000540408 ANAPC11Q9NYG5 84 aa7.3□□□□□ -1.24
COPS7A-211ENST00000540408 IGKV2D-26A0A0A0MRZ7 120 aa7.29□□□□□ -1.24
COPS7A-211ENST00000540408 GAGE10A6NGK3 116 aa7.29□□□□□ -1.24
COPS7A-211ENST00000540408 FAM229BQ4G0N7 80 aa7.29□□□□□ -1.24
COPS7A-211ENST00000540408 NKAPP1Q8N9T2 125 aa7.29□□□□□ -1.24
COPS7A-211ENST00000540408 RETNLBQ9BQ08 111 aa7.29□□□□□ -1.24
COPS7A-211ENST00000540408 NXT2Q9NPJ8 142 aaKnown RBP7.29□□□□□ -1.24
COPS7A-211ENST00000540408 CTAG1AP78358 180 aa7.28□□□□□ -1.24
COPS7A-211ENST00000540408 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
COPS7A-211ENST00000540408 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
COPS7A-211ENST00000540408 PDZD11Q5EBL8 140 aa7.27□□□□□ -1.25
COPS7A-211ENST00000540408 COX7B2Q8TF08 81 aa7.27□□□□□ -1.25
COPS7A-211ENST00000540408 TIMM17AQ99595 171 aa7.27□□□□□ -1.25
COPS7A-211ENST00000540408 IGLV7-46A0A075B6I9 117 aa7.26□□□□□ -1.25
COPS7A-211ENST00000540408 KRTAP9-6A0A140TA67 174 aa7.26□□□□□ -1.25
COPS7A-211ENST00000540408 RAB5BP61020 215 aa7.26□□□□□ -1.25
COPS7A-211ENST00000540408 PNRC1Q12796 327 aaPredicted RBP7.26□□□□□ -1.25
COPS7A-211ENST00000540408 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
COPS7A-211ENST00000540408 TOMM6Q96B49 74 aa7.25□□□□□ -1.25
COPS7A-211ENST00000540408 ANAPC16Q96DE5 110 aa7.25□□□□□ -1.25
COPS7A-211ENST00000540408 TINCRA0A1B0GVN0 87 aa7.24□□□□□ -1.25
COPS7A-211ENST00000540408 SMIM1B2RUZ4 78 aa7.24□□□□□ -1.25
COPS7A-211ENST00000540408 MT-ND4LP03901 98 aa7.24□□□□□ -1.25
COPS7A-211ENST00000540408 ERASQ7Z444 233 aa7.24□□□□□ -1.25
COPS7A-211ENST00000540408 KRTAP13-1Q8IUC0 172 aa7.24□□□□□ -1.25
COPS7A-211ENST00000540408 SCGB3A1Q96QR1 104 aa7.24□□□□□ -1.25
COPS7A-211ENST00000540408 IGKV2-28A0A075B6P5 120 aa7.23□□□□□ -1.25
COPS7A-211ENST00000540408 LINC01549A6NIU2 74 aa7.23□□□□□ -1.25
COPS7A-211ENST00000540408 ATP5LO75964 103 aa7.23□□□□□ -1.25
COPS7A-211ENST00000540408 IGKV2D-28P01615 120 aa7.23□□□□□ -1.25
COPS7A-211ENST00000540408 FAM19A1Q7Z5A9 133 aa7.22□□□□□ -1.25
COPS7A-211ENST00000540408 PRLHP81277 87 aa7.21□□□□□ -1.26
COPS7A-211ENST00000540408 MRPL18Q9H0U6 180 aaKnown RBP7.21□□□□□ -1.26
COPS7A-211ENST00000540408 PPDPFQ9H3Y8 114 aa7.21□□□□□ -1.26
COPS7A-211ENST00000540408 IGLV5-45A0A087WSX0 123 aa7.2□□□□□ -1.26
COPS7A-211ENST00000540408 H3BRM9 83 aa7.2□□□□□ -1.26
COPS7A-211ENST00000540408 SPINK8P0C7L1 97 aa7.2□□□□□ -1.26
COPS7A-211ENST00000540408 RPL24P83731 157 aaKnown RBP7.2□□□□□ -1.26
COPS7A-211ENST00000540408 SPAG11AQ6PDA7 123 aa7.2□□□□□ -1.26
COPS7A-211ENST00000540408 PFN2P35080 140 aa7.19□□□□□ -1.26
COPS7A-211ENST00000540408 C4orf48Q5BLP8 95 aa7.19□□□□□ -1.26
COPS7A-211ENST00000540408 GNB1LQ9BYB4 327 aa7.19□□□□□ -1.26
COPS7A-211ENST00000540408 TMEM126AQ9H061 195 aa7.19□□□□□ -1.26
COPS7A-211ENST00000540408 CST9LQ9H4G1 147 aa7.19□□□□□ -1.26
COPS7A-211ENST00000540408 SCO1O75880 301 aa7.18□□□□□ -1.26
COPS7A-211ENST00000540408 CBLN2Q8IUK8 224 aa7.18□□□□□ -1.26
COPS7A-211ENST00000540408 LINC00337Q8N6G1 96 aa7.18□□□□□ -1.26
COPS7A-211ENST00000540408 ADCYAP1P18509 176 aa7.17□□□□□ -1.26
COPS7A-211ENST00000540408 PMVKQ15126 192 aa7.17□□□□□ -1.26
COPS7A-211ENST00000540408 PLEKHB2Q96CS7 222 aa7.17□□□□□ -1.26
COPS7A-211ENST00000540408 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
COPS7A-211ENST00000540408 TMEM238C9JI98 176 aa7.16□□□□□ -1.26
COPS7A-211ENST00000540408 COX17Q14061 63 aa7.16□□□□□ -1.26
COPS7A-211ENST00000540408 KIAA1644Q3SXP7 199 aa7.16□□□□□ -1.26
COPS7A-211ENST00000540408 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
COPS7A-211ENST00000540408 VPREB1P12018 145 aa7.15□□□□□ -1.26
COPS7A-211ENST00000540408 C3orf22Q8N5N4 141 aa7.15□□□□□ -1.26
COPS7A-211ENST00000540408 HIGD2AQ9BW72 106 aa7.15□□□□□ -1.26
COPS7A-211ENST00000540408 SND1-IT1Q9HBX3 110 aa7.15□□□□□ -1.26
COPS7A-211ENST00000540408 M0R378 163 aa7.14□□□□□ -1.27
COPS7A-211ENST00000540408 RAB14P61106 215 aa7.14□□□□□ -1.27
COPS7A-211ENST00000540408 ERG28Q9UKR5 140 aa7.14□□□□□ -1.27
COPS7A-211ENST00000540408 LINC01547P58512 204 aaPredicted RBP7.13□□□□□ -1.27
COPS7A-211ENST00000540408 SMCO4Q9NRQ5 59 aa7.13□□□□□ -1.27
COPS7A-211ENST00000540408 ZNF706Q9Y5V0 76 aaPredicted RBP7.13□□□□□ -1.27
COPS7A-211ENST00000540408 LINC01546A6NGU7 62 aa7.12□□□□□ -1.27
COPS7A-211ENST00000540408 NDUFA6P56556 154 aa7.12□□□□□ -1.27
COPS7A-211ENST00000540408 SFTA2Q6UW10 78 aa7.12□□□□□ -1.27
COPS7A-211ENST00000540408 FA2HQ7L5A8 372 aa7.12□□□□□ -1.27
COPS7A-211ENST00000540408 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
COPS7A-211ENST00000540408 TRAV9-1A0A075B6T8 112 aa7.11□□□□□ -1.27
COPS7A-211ENST00000540408 IGLV5-39A0A0G2JS06 123 aa7.11□□□□□ -1.27
COPS7A-211ENST00000540408 SPRR4Q96PI1 79 aa7.11□□□□□ -1.27
COPS7A-211ENST00000540408 IGLC3P0DOY3 106 aa7.1□□□□□ -1.27
COPS7A-211ENST00000540408 ZNF625Q96I27 306 aaPredicted RBP7.1□□□□□ -1.27
COPS7A-211ENST00000540408 S100PP25815 95 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms