RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 SPANXA2-OT1Q8N9U9 137 aa3.21□□□□□ -1.89
MDM2-226ENST00000540352 ZNRD1Q9P1U0 126 aa3.21□□□□□ -1.89
MDM2-226ENST00000540352 ZNF292O60281 2723 aa3.21□□□□□ -1.9
MDM2-226ENST00000540352 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.2□□□□□ -1.9
MDM2-226ENST00000540352 IGHV3OR16-9A0A0B4J2B5 98 aa3.2□□□□□ -1.9
MDM2-226ENST00000540352 TRBV6-4A0A1B0GX49 114 aa3.2□□□□□ -1.9
MDM2-226ENST00000540352 LRCOL1A6NCL2 159 aa3.2□□□□□ -1.9
MDM2-226ENST00000540352 CYSRT1A8MQ03 144 aa3.2□□□□□ -1.9
MDM2-226ENST00000540352 A8MU10 97 aa3.2□□□□□ -1.9
MDM2-226ENST00000540352 IGKV4-1P06312 121 aa3.2□□□□□ -1.9
MDM2-226ENST00000540352 KLK9Q2XQG4 91 aa3.2□□□□□ -1.9
MDM2-226ENST00000540352 ZNF318Q5VUA4 2279 aa3.2□□□□□ -1.9
MDM2-226ENST00000540352 ZGRF1Q86YA3 2104 aa3.2□□□□□ -1.9
MDM2-226ENST00000540352 CFAP54Q96N23 3096 aa3.2□□□□□ -1.9
MDM2-226ENST00000540352 IGHV3-49A0A0A0MS15 119 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 CLPSL1A2RUU4 121 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 APELAP0DMC3 54 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 RNASE13Q5GAN3 156 aaKnown RBP3.19□□□□□ -1.9
MDM2-226ENST00000540352 LINC00208Q96KT6 92 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 B9D2Q9BPU9 175 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 CHCHD7Q9BUK0 85 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 CELA1Q9UNI1 258 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 PRR14LQ5THK1 2151 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 KNL1Q8NG31 2342 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 SPEGQ15772 3267 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 IGHV7-81A0A0B4J1V7 117 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 K7EQD1 137 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 CCL18P55774 89 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 FBXL19-AS1Q494R0 122 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 LINC00242Q5T6M2 205 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 TMEM105Q8N8V8 129 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 FDCSPQ8NFU4 85 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 NPBQ8NG41 125 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 MUC7Q8TAX7 377 aa3.19□□□□□ -1.9
MDM2-226ENST00000540352 DOCK10Q96BY6 2186 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 SVILO95425 2214 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 SEC16AO15027 2179 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 IGLV3-9A0A075B6K5 115 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 IGHV3-16A0A0C4DH30 117 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 ETDCA0A1B0GVM5 59 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 A0A1B0GW54 56 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 H3BPC8 53 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 CCL3L1P16619 93 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 IGHV1-2P23083 117 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 SCXQ7RTU7 201 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 PRSS33Q8NF86 280 aa3.18□□□□□ -1.9
MDM2-226ENST00000540352 ZFHX2Q9C0A1 2572 aaPredicted RBP3.17□□□□□ -1.9
MDM2-226ENST00000540352 IGLV7-46A0A075B6I9 117 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 TRGV2A0A075B6R0 118 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 IGHV3-72A0A0B4J1Y9 119 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 A0A0J9YWU9 116 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 IGLV1-47P01700 117 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 IGHV1-8P0DP01 117 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 COX7BP24311 80 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 LINC00158P58513 81 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 PRR3P79522 188 aaKnown RBP3.17□□□□□ -1.9
MDM2-226ENST00000540352 COX6A2Q02221 97 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 C6orf99Q4VX62 202 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 LINC00575Q6W349 94 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 DEFB119Q8N690 84 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 COX7B2Q8TF08 81 aa3.17□□□□□ -1.9
MDM2-226ENST00000540352 CADP27708 2225 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 MUC4Q99102 2169 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 MUC6Q6W4X9 2439 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 CACNA1HO95180 2353 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 IGLV4-60A0A075B6I1 120 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 IGHV3OR16-12A0A075B7B8 117 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 IGHV6-1A0A0B4J1U7 121 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 IGHV3-73A0A0B4J1V6 119 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 NDUFA4O00483 81 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 IGHV3-53P01767 116 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 BSPH1Q075Z2 132 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 KRTAP7-1Q8IUC3 87 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 DEFB104AQ8WTQ1 72 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 LINC00467Q9BRT7 94 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 PLAC8Q9NZF1 115 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 LINC01558Q9Y6Z2 57 aa3.16□□□□□ -1.9
MDM2-226ENST00000540352 CACNA1EQ15878 2313 aa3.15□□□□□ -1.91
MDM2-226ENST00000540352 SDK2Q58EX2 2172 aa3.15□□□□□ -1.91
MDM2-226ENST00000540352 DCHS1Q96JQ0 3298 aa3.15□□□□□ -1.91
MDM2-226ENST00000540352 A0A096LNT2 108 aa3.15□□□□□ -1.91
MDM2-226ENST00000540352 PINLYPA6NC86 204 aa3.15□□□□□ -1.91
MDM2-226ENST00000540352 PLXNB1O43157 2135 aa3.15□□□□□ -1.91
MDM2-226ENST00000540352 RETNLBQ9BQ08 111 aa3.15□□□□□ -1.91
MDM2-226ENST00000540352 ZNF706Q9Y5V0 76 aaPredicted RBP3.15□□□□□ -1.91
MDM2-226ENST00000540352 S4R3C0 116 aa3.15□□□□□ -1.91
MDM2-226ENST00000540352 WDFY3Q8IZQ1 3526 aa3.15□□□□□ -1.91
MDM2-226ENST00000540352 AKAP13Q12802 2813 aa3.14□□□□□ -1.91
MDM2-226ENST00000540352 RIF1Q5UIP0 2472 aaKnown RBP3.14□□□□□ -1.91
MDM2-226ENST00000540352 ASCC3Q8N3C0 2202 aaKnown RBP3.14□□□□□ -1.91
MDM2-226ENST00000540352 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.14□□□□□ -1.91
MDM2-226ENST00000540352 IGHV3-35A0A0C4DH35 117 aa3.14□□□□□ -1.91
MDM2-226ENST00000540352 M0R2N4 97 aa3.14□□□□□ -1.91
MDM2-226ENST00000540352 IGHV1-46P01743 117 aa3.14□□□□□ -1.91
MDM2-226ENST00000540352 DEFB133Q30KQ1 61 aa3.14□□□□□ -1.91
MDM2-226ENST00000540352 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms