RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 RHODO00212 210 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 TIMM17BO60830 172 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 TSHBP01222 138 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 ACYP1P07311 99 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 PRR9Q5T870 116 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 SUMO4Q6EEV6 95 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 C20orf203Q8NBC4 194 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 TMEM263Q8WUH6 116 aaKnown RBP4.11□□□□□ -1.75
CPSF7-219ENST00000539952 CARD19Q96LW7 228 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 C9orf85Q96MD7 179 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 ANAPC13Q9BS18 74 aa4.11□□□□□ -1.75
CPSF7-219ENST00000539952 FLG2Q5D862 2391 aaPredicted RBP4.11□□□□□ -1.75
CPSF7-219ENST00000539952 IGHV1OR15-1A0A075B7D0 117 aa4.1□□□□□ -1.75
CPSF7-219ENST00000539952 TRAV26-1A0A087WT03 109 aa4.1□□□□□ -1.75
CPSF7-219ENST00000539952 TRAV8-4A0A0B4J246 113 aa4.1□□□□□ -1.75
CPSF7-219ENST00000539952 FAM240AA0A1B0GVK7 77 aa4.1□□□□□ -1.75
CPSF7-219ENST00000539952 A4D1N5 150 aa4.1□□□□□ -1.75
CPSF7-219ENST00000539952 H3BNG1 76 aa4.1□□□□□ -1.75
CPSF7-219ENST00000539952 SMR3BP02814 79 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-219ENST00000539952 PRB4P10163 310 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-219ENST00000539952 CIRBPQ14011 172 aaKnown RBP4.1□□□□□ -1.75
CPSF7-219ENST00000539952 ESRGQ1W209 222 aa4.1□□□□□ -1.75
CPSF7-219ENST00000539952 LINC01620Q4KN68 170 aa4.1□□□□□ -1.75
CPSF7-219ENST00000539952 MUSTN1Q8IVN3 82 aa4.1□□□□□ -1.75
CPSF7-219ENST00000539952 DNAJC30Q96LL9 226 aa4.1□□□□□ -1.75
CPSF7-219ENST00000539952 SRRM2Q9UQ35 2752 aaKnown RBP4.1□□□□□ -1.75
CPSF7-219ENST00000539952 IGHV3-16A0A0C4DH30 117 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 TINCRA0A1B0GVN0 87 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 A8MTW9 85 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 KRTAP29-1A8MX34 341 aaPredicted RBP4.09□□□□□ -1.75
CPSF7-219ENST00000539952 C9JAW5 83 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 J3KRW8 73 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 M0QY20 66 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 MT-ATP8P03928 68 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 DEFB1P60022 68 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 MRPS36P82909 103 aaKnown RBP4.09□□□□□ -1.75
CPSF7-219ENST00000539952 ZNF56Q15929 161 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 Q1RN00 199 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 AMELXQ99217 191 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 TIMM21Q9BVV7 248 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 IMUPQ9GZP8 106 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 PPDPFQ9H3Y8 114 aa4.09□□□□□ -1.75
CPSF7-219ENST00000539952 IGHV1-58A0A0C4DH39 117 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 GAGE12JA6NER3 117 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 F6UB75 175 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 GAGE7O76087 117 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 GAGE12FP0CL80 117 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 GAGE12GP0CL81 117 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 GAGE12IP0CL82 117 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 ZNF22P17026 224 aaPredicted RBP4.08□□□□□ -1.76
CPSF7-219ENST00000539952 RPL39P62891 51 aaKnown RBP4.08□□□□□ -1.76
CPSF7-219ENST00000539952 GAGE4Q13068 117 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 Q6ZSN1 163 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 UBE2WQ96B02 151 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 C16orf74Q96GX8 76 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 LINC01587Q99440 93 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 KRTAP1-5Q9BYS1 174 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 TNFRSF18Q9Y5U5 241 aa4.08□□□□□ -1.76
CPSF7-219ENST00000539952 IGLV4-3A0A075B6K6 122 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 TRAV12-3A0A0B4J271 114 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 PLAC8L1A1L4L8 177 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 INSP01308 110 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 PRM2P04554 102 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 IGHV3-30-3P0DP02 117 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 GYPEP15421 78 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 TIRAPP58753 221 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 KRTAP10-1P60331 282 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 C2orf82Q6UX34 121 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 Q6ZQT7 251 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 Q6ZRN7 208 aaPredicted RBP4.07□□□□□ -1.76
CPSF7-219ENST00000539952 LINC00467Q9BRT7 94 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 SPXQ9BT56 116 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 FAT1Q14517 4588 aa4.07□□□□□ -1.76
CPSF7-219ENST00000539952 A0A087WTM6 91 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 A0A087WWL8 130 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 A0A0J9YXV3 536 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 PRSS2P07478 247 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 HTN1P15515 57 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 NDUFV3P56181 108 aaKnown RBP4.06□□□□□ -1.76
CPSF7-219ENST00000539952 TSPEAR-AS2P59090 65 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 MIAQ16674 131 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 SPINK13Q1W4C9 94 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 FAM74A4Q5TZK3 123 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 DEFB104AQ8WTQ1 72 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 NTN5Q8WTR8 489 aaPredicted RBP4.06□□□□□ -1.76
CPSF7-219ENST00000539952 TMEM126AQ9H061 195 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 NOP10Q9NPE3 64 aaKnown RBP4.06□□□□□ -1.76
CPSF7-219ENST00000539952 NDUFA12Q9UI09 145 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 ICOSQ9Y6W8 199 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 MUC2Q02817 5179 aa4.06□□□□□ -1.76
CPSF7-219ENST00000539952 LST1O00453 97 aa4.05□□□□□ -1.76
CPSF7-219ENST00000539952 SFTA2Q6UW10 78 aa4.05□□□□□ -1.76
CPSF7-219ENST00000539952 FAM19A3Q7Z5A8 133 aa4.05□□□□□ -1.76
CPSF7-219ENST00000539952 LINC00612Q8N6U2 182 aa4.05□□□□□ -1.76
CPSF7-219ENST00000539952 VSIG2Q96IQ7 327 aa4.05□□□□□ -1.76
CPSF7-219ENST00000539952 JPT2Q9H910 190 aa4.05□□□□□ -1.76
CPSF7-219ENST00000539952 TRAV12-2A0A075B6T6 113 aa4.04□□□□□ -1.76
CPSF7-219ENST00000539952 H7C423 109 aa4.04□□□□□ -1.76
CPSF7-219ENST00000539952 NDUFA1O15239 70 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms