RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 COMMD7Q86VX2 200 aa10.24□□□□□ -0.77
DDB1-215ENST00000539712 G0S2P27469 103 aa10.23□□□□□ -0.77
DDB1-215ENST00000539712 ERASQ7Z444 233 aa10.23□□□□□ -0.77
DDB1-215ENST00000539712 FAM19A5Q7Z5A7 132 aaPredicted RBP10.23□□□□□ -0.77
DDB1-215ENST00000539712 Q8IZM0 81 aa10.22□□□□□ -0.77
DDB1-215ENST00000539712 HERVK_113P63121 156 aa10.21□□□□□ -0.77
DDB1-215ENST00000539712 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.77
DDB1-215ENST00000539712 PACRGQ96M98 296 aaPredicted RBP10.21□□□□□ -0.77
DDB1-215ENST00000539712 SCGB3A1Q96QR1 104 aa10.21□□□□□ -0.77
DDB1-215ENST00000539712 TOMM7Q9P0U1 55 aa10.21□□□□□ -0.77
DDB1-215ENST00000539712 CARHSP1Q9Y2V2 147 aaKnown RBP10.21□□□□□ -0.77
DDB1-215ENST00000539712 IGLV7-43P04211 117 aa10.2□□□□□ -0.78
DDB1-215ENST00000539712 S100PP25815 95 aa10.2□□□□□ -0.78
DDB1-215ENST00000539712 SEC11AP67812 179 aa10.2□□□□□ -0.78
DDB1-215ENST00000539712 C6orf226Q5I0X4 101 aa10.2□□□□□ -0.78
DDB1-215ENST00000539712 PRSS2P07478 247 aa10.19□□□□□ -0.78
DDB1-215ENST00000539712 IGLV5-45A0A087WSX0 123 aa10.18□□□□□ -0.78
DDB1-215ENST00000539712 M0QXV9 152 aa10.18□□□□□ -0.78
DDB1-215ENST00000539712 CKS1BP61024 79 aa10.18□□□□□ -0.78
DDB1-215ENST00000539712 MRPL18Q9H0U6 180 aaKnown RBP10.18□□□□□ -0.78
DDB1-215ENST00000539712 CST9LQ9H4G1 147 aa10.18□□□□□ -0.78
DDB1-215ENST00000539712 GEMIN7Q9H840 131 aaKnown RBP10.18□□□□□ -0.78
DDB1-215ENST00000539712 TINCRA0A1B0GVN0 87 aa10.17□□□□□ -0.78
DDB1-215ENST00000539712 SMIM1B2RUZ4 78 aa10.17□□□□□ -0.78
DDB1-215ENST00000539712 RHEBQ15382 184 aa10.17□□□□□ -0.78
DDB1-215ENST00000539712 COX19Q49B96 90 aa10.17□□□□□ -0.78
DDB1-215ENST00000539712 FABP9Q0Z7S8 132 aa10.16□□□□□ -0.78
DDB1-215ENST00000539712 LINC00469Q8N7U9 141 aa10.16□□□□□ -0.78
DDB1-215ENST00000539712 RPS10P5Q9NQ39 176 aa10.16□□□□□ -0.78
DDB1-215ENST00000539712 A0A096LNJ9 63 aa10.15□□□□□ -0.78
DDB1-215ENST00000539712 F8VRH5 84 aa10.15□□□□□ -0.78
DDB1-215ENST00000539712 URB1-AS1Q96HZ7 61 aa10.15□□□□□ -0.78
DDB1-215ENST00000539712 XAGE1AQ9HD64 81 aa10.15□□□□□ -0.78
DDB1-215ENST00000539712 RNF213Q63HN8 5207 aa10.14□□□□□ -0.79
DDB1-215ENST00000539712 LINC01549A6NIU2 74 aa10.14□□□□□ -0.79
DDB1-215ENST00000539712 DIRC1Q969H9 104 aa10.14□□□□□ -0.79
DDB1-215ENST00000539712 H0Y9J4 135 aa10.13□□□□□ -0.79
DDB1-215ENST00000539712 PDZD11Q5EBL8 140 aa10.13□□□□□ -0.79
DDB1-215ENST00000539712 FA2HQ7L5A8 372 aa10.13□□□□□ -0.79
DDB1-215ENST00000539712 C22orf24Q9Y442 160 aa10.13□□□□□ -0.79
DDB1-215ENST00000539712 KRTAP1-4P0C5Y4 121 aa10.12□□□□□ -0.79
DDB1-215ENST00000539712 PMVKQ15126 192 aa10.12□□□□□ -0.79
DDB1-215ENST00000539712 CXCL5P42830 114 aa10.11□□□□□ -0.79
DDB1-215ENST00000539712 UBE2BP63146 152 aa10.11□□□□□ -0.79
DDB1-215ENST00000539712 PRR26Q8N8Z3 221 aa10.11□□□□□ -0.79
DDB1-215ENST00000539712 C18orf32Q8TCD1 76 aa10.11□□□□□ -0.79
DDB1-215ENST00000539712 COX7B2Q8TF08 81 aa10.11□□□□□ -0.79
DDB1-215ENST00000539712 SPINK8P0C7L1 97 aa10.1□□□□□ -0.79
DDB1-215ENST00000539712 SMCO4Q9NRQ5 59 aa10.1□□□□□ -0.79
DDB1-215ENST00000539712 LPAP08519 4548 aa10.09□□□□□ -0.79
DDB1-215ENST00000539712 TRAPPC1Q9Y5R8 145 aa10.09□□□□□ -0.79
DDB1-215ENST00000539712 APOC3P02656 99 aa10.07□□□□□ -0.8
DDB1-215ENST00000539712 LINC00614P0C842 121 aa10.07□□□□□ -0.8
DDB1-215ENST00000539712 IGLC3P0DOY3 106 aa10.07□□□□□ -0.8
DDB1-215ENST00000539712 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
DDB1-215ENST00000539712 IGLV5-39A0A0G2JS06 123 aa10.06□□□□□ -0.8
DDB1-215ENST00000539712 PMCHL1Q16048 86 aa10.06□□□□□ -0.8
DDB1-215ENST00000539712 YPEL4Q96NS1 127 aa10.06□□□□□ -0.8
DDB1-215ENST00000539712 LBHQ53QV2 105 aaPredicted RBP10.05□□□□□ -0.8
DDB1-215ENST00000539712 MRPL55Q7Z7F7 128 aaKnown RBP10.05□□□□□ -0.8
DDB1-215ENST00000539712 ZNF861PO60384 105 aa10.04□□□□□ -0.8
DDB1-215ENST00000539712 ATP6V1G1O75348 118 aa10.04□□□□□ -0.8
DDB1-215ENST00000539712 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
DDB1-215ENST00000539712 RAB5BP61020 215 aa10.04□□□□□ -0.8
DDB1-215ENST00000539712 H3BRM9 83 aa10.03□□□□□ -0.8
DDB1-215ENST00000539712 NUPR1O60356 82 aa10.03□□□□□ -0.8
DDB1-215ENST00000539712 HBDP02042 147 aa10.03□□□□□ -0.8
DDB1-215ENST00000539712 LINC00167Q96N53 147 aa10.03□□□□□ -0.8
DDB1-215ENST00000539712 IGLV1-50A0A075B6I6 118 aa10.02□□□□□ -0.81
DDB1-215ENST00000539712 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
DDB1-215ENST00000539712 SNAPINO95295 136 aa10.02□□□□□ -0.81
DDB1-215ENST00000539712 NDUFA6P56556 154 aa10.02□□□□□ -0.81
DDB1-215ENST00000539712 SVBPQ8N300 66 aa10.02□□□□□ -0.81
DDB1-215ENST00000539712 C11orf86A6NJI1 115 aa10□□□□□ -0.81
DDB1-215ENST00000539712 RPL37AP8A6NKH3 93 aa10□□□□□ -0.81
DDB1-215ENST00000539712 BCE1O60756 84 aa9.99□□□□□ -0.81
DDB1-215ENST00000539712 ATP5LO75964 103 aa9.99□□□□□ -0.81
DDB1-215ENST00000539712 NDUFA5Q16718 116 aa9.99□□□□□ -0.81
DDB1-215ENST00000539712 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
DDB1-215ENST00000539712 BAGE3Q86Y29 109 aa9.98□□□□□ -0.81
DDB1-215ENST00000539712 SCO1O75880 301 aa9.97□□□□□ -0.81
DDB1-215ENST00000539712 PFN2P35080 140 aa9.97□□□□□ -0.81
DDB1-215ENST00000539712 KRTAP13-1Q8IUC0 172 aa9.96□□□□□ -0.82
DDB1-215ENST00000539712 SND1-IT1Q9HBX3 110 aa9.96□□□□□ -0.82
DDB1-215ENST00000539712 Q8NDZ9 215 aa9.95□□□□□ -0.82
DDB1-215ENST00000539712 ZNF625Q96I27 306 aaPredicted RBP9.95□□□□□ -0.82
DDB1-215ENST00000539712 ERG28Q9UKR5 140 aa9.95□□□□□ -0.82
DDB1-215ENST00000539712 VPREB1P12018 145 aa9.94□□□□□ -0.82
DDB1-215ENST00000539712 RPL28P46779 137 aaKnown RBP9.94□□□□□ -0.82
DDB1-215ENST00000539712 CHCHD1Q96BP2 118 aaKnown RBP9.94□□□□□ -0.82
DDB1-215ENST00000539712 RPL13AP40429 203 aaKnown RBP9.93□□□□□ -0.82
DDB1-215ENST00000539712 TMEM170BQ5T4T1 132 aa9.93□□□□□ -0.82
DDB1-215ENST00000539712 CHTOPQ9Y3Y2 248 aaKnown RBP9.93□□□□□ -0.82
DDB1-215ENST00000539712 A0A087X002 238 aa9.92□□□□□ -0.82
DDB1-215ENST00000539712 COX17Q14061 63 aa9.92□□□□□ -0.82
DDB1-215ENST00000539712 CBLN2Q8IUK8 224 aa9.92□□□□□ -0.82
DDB1-215ENST00000539712 NKAPP1Q8N9T2 125 aa9.92□□□□□ -0.82
DDB1-215ENST00000539712 TRAV12-1A0A0B4J245 112 aa9.91□□□□□ -0.82
DDB1-215ENST00000539712 TMEM223A0PJW6 202 aa9.91□□□□□ -0.82
DDB1-215ENST00000539712 SLC7A5P1Q8MH63 180 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms