RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 MYO9AB2RTY4 2548 aa9.17□□□□□ -0.94
UBE3B-209ENST00000539584 PRB1P04280 392 aa9.16□□□□□ -0.94
UBE3B-209ENST00000539584 CFAP161Q6P656 301 aa9.16□□□□□ -0.94
UBE3B-209ENST00000539584 CSMD2Q7Z408 3487 aa9.16□□□□□ -0.94
UBE3B-209ENST00000539584 NAV2Q8IVL1 2488 aa9.16□□□□□ -0.94
UBE3B-209ENST00000539584 ZANQ9Y493 2812 aa9.16□□□□□ -0.94
UBE3B-209ENST00000539584 LYRM9A8MSI8 78 aa9.15□□□□□ -0.94
UBE3B-209ENST00000539584 NCR3O14931 201 aa9.15□□□□□ -0.94
UBE3B-209ENST00000539584 WFDC11Q8NEX6 87 aa9.15□□□□□ -0.94
UBE3B-209ENST00000539584 IGSF10Q6WRI0 2623 aa9.15□□□□□ -0.94
UBE3B-209ENST00000539584 SERP2Q8N6R1 65 aa9.15□□□□□ -0.94
UBE3B-209ENST00000539584 PIEZO1Q92508 2521 aa9.15□□□□□ -0.95
UBE3B-209ENST00000539584 H3BQ85 93 aa9.14□□□□□ -0.95
UBE3B-209ENST00000539584 PLA2G2AP14555 144 aa9.14□□□□□ -0.95
UBE3B-209ENST00000539584 KIAA0087Q14695 138 aa9.14□□□□□ -0.95
UBE3B-209ENST00000539584 TRBV10-3A0A0K0K1G6 114 aa9.14□□□□□ -0.95
UBE3B-209ENST00000539584 NANOS2P60321 138 aaKnown RBP9.14□□□□□ -0.95
UBE3B-209ENST00000539584 MYO18BQ8IUG5 2567 aa9.13□□□□□ -0.95
UBE3B-209ENST00000539584 RPS28P62857 69 aaKnown RBP9.13□□□□□ -0.95
UBE3B-209ENST00000539584 BBC3Q96PG8 261 aaPredicted RBP9.13□□□□□ -0.95
UBE3B-209ENST00000539584 UTP20O75691 2785 aaKnown RBP9.13□□□□□ -0.95
UBE3B-209ENST00000539584 LYPD5Q6UWN5 251 aa9.12□□□□□ -0.95
UBE3B-209ENST00000539584 IGKV3D-7A0A0C4DH55 119 aa9.12□□□□□ -0.95
UBE3B-209ENST00000539584 SLPIP03973 132 aa9.12□□□□□ -0.95
UBE3B-209ENST00000539584 C11orf68Q9H3H3 251 aaKnown RBP9.12□□□□□ -0.95
UBE3B-209ENST00000539584 X6R8D5 127 aa9.12□□□□□ -0.95
UBE3B-209ENST00000539584 PTPN13Q12923 2485 aa9.11□□□□□ -0.95
UBE3B-209ENST00000539584 HILS1P60008 231 aa9.11□□□□□ -0.95
UBE3B-209ENST00000539584 POLQO75417 2590 aa9.11□□□□□ -0.95
UBE3B-209ENST00000539584 CHCHD10Q8WYQ3 142 aaPredicted RBP9.1□□□□□ -0.95
UBE3B-209ENST00000539584 TEX15Q9BXT5 2789 aa9.1□□□□□ -0.95
UBE3B-209ENST00000539584 FAM208BQ5VWN6 2430 aa9.1□□□□□ -0.95
UBE3B-209ENST00000539584 hADV29S1A0JD25 119 aa9.1□□□□□ -0.95
UBE3B-209ENST00000539584 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
UBE3B-209ENST00000539584 LINC00269Q8N2A0 174 aa9.1□□□□□ -0.95
UBE3B-209ENST00000539584 AKAP9Q99996 3911 aa9.09□□□□□ -0.95
UBE3B-209ENST00000539584 J3KT08 172 aa9.09□□□□□ -0.95
UBE3B-209ENST00000539584 TMEM258P61165 79 aa9.09□□□□□ -0.95
UBE3B-209ENST00000539584 REG3AQ06141 175 aa9.09□□□□□ -0.95
UBE3B-209ENST00000539584 KRTAP1-1Q07627 177 aa9.09□□□□□ -0.95
UBE3B-209ENST00000539584 C3orf56Q8N813 242 aa9.09□□□□□ -0.95
UBE3B-209ENST00000539584 UBL5Q9BZL1 73 aa9.09□□□□□ -0.95
UBE3B-209ENST00000539584 CHD6Q8TD26 2715 aa9.08□□□□□ -0.96
UBE3B-209ENST00000539584 LINC00575Q6W349 94 aa9.08□□□□□ -0.96
UBE3B-209ENST00000539584 C2CD3Q4AC94 2353 aa9.08□□□□□ -0.96
UBE3B-209ENST00000539584 BCE1O60756 84 aa9.07□□□□□ -0.96
UBE3B-209ENST00000539584 PDE6GP18545 87 aa9.07□□□□□ -0.96
UBE3B-209ENST00000539584 LINC00482Q8N8I6 264 aa9.07□□□□□ -0.96
UBE3B-209ENST00000539584 WNK1Q9H4A3 2382 aa9.07□□□□□ -0.96
UBE3B-209ENST00000539584 A0A0J9YWU9 116 aa9.07□□□□□ -0.96
UBE3B-209ENST00000539584 GHRHP01286 108 aa9.07□□□□□ -0.96
UBE3B-209ENST00000539584 ANGP03950 147 aaKnown RBP9.07□□□□□ -0.96
UBE3B-209ENST00000539584 IGHV4-30-4P0DP06 118 aa9.07□□□□□ -0.96
UBE3B-209ENST00000539584 C6orf99Q4VX62 202 aa9.07□□□□□ -0.96
UBE3B-209ENST00000539584 CLPSL2Q6UWE3 100 aa9.07□□□□□ -0.96
UBE3B-209ENST00000539584 UBR5O95071 2799 aaPredicted RBP9.06□□□□□ -0.96
UBE3B-209ENST00000539584 LOC110117498A0A087WWA1 95 aa9.06□□□□□ -0.96
UBE3B-209ENST00000539584 ZNF561-AS1K7EIQ3 104 aa9.06□□□□□ -0.96
UBE3B-209ENST00000539584 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
UBE3B-209ENST00000539584 NOTCH3Q9UM47 2321 aa9.06□□□□□ -0.96
UBE3B-209ENST00000539584 PRR3P79522 188 aaKnown RBP9.05□□□□□ -0.96
UBE3B-209ENST00000539584 RBM3P98179 157 aaKnown RBP9.05□□□□□ -0.96
UBE3B-209ENST00000539584 ZNF462Q96JM2 2506 aa9.05□□□□□ -0.96
UBE3B-209ENST00000539584 LRRK2Q5S007 2527 aa9.04□□□□□ -0.96
UBE3B-209ENST00000539584 GVQW2A0A096LPI5 108 aaPredicted RBP9.04□□□□□ -0.96
UBE3B-209ENST00000539584 APOC4P55056 127 aa9.04□□□□□ -0.96
UBE3B-209ENST00000539584 A0A087WVE0 104 aa9.04□□□□□ -0.96
UBE3B-209ENST00000539584 C9orf66Q5T8R8 295 aa9.04□□□□□ -0.96
UBE3B-209ENST00000539584 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
UBE3B-209ENST00000539584 IGLV6-57P01721 117 aa9.03□□□□□ -0.96
UBE3B-209ENST00000539584 LELP1Q5T871 98 aa9.03□□□□□ -0.96
UBE3B-209ENST00000539584 C6orf223Q8N319 242 aa9.03□□□□□ -0.96
UBE3B-209ENST00000539584 A0A096LPF7 62 aa9.02□□□□□ -0.97
UBE3B-209ENST00000539584 DAD1P61803 113 aa9.02□□□□□ -0.97
UBE3B-209ENST00000539584 TLN2Q9Y4G6 2542 aa9.02□□□□□ -0.97
UBE3B-209ENST00000539584 SPAG11BQ08648 103 aa9.02□□□□□ -0.97
UBE3B-209ENST00000539584 Q6ZQT0 140 aa9.02□□□□□ -0.97
UBE3B-209ENST00000539584 PRR34Q9NV39 138 aa9.01□□□□□ -0.97
UBE3B-209ENST00000539584 EPG5Q9HCE0 2579 aa9.01□□□□□ -0.97
UBE3B-209ENST00000539584 IGLV10-54A0A075B6I4 117 aa9□□□□□ -0.97
UBE3B-209ENST00000539584 MIFP14174 115 aa9□□□□□ -0.97
UBE3B-209ENST00000539584 C9orf116Q5BN46 136 aaPredicted RBP9□□□□□ -0.97
UBE3B-209ENST00000539584 DSCR8Q96T75 97 aa9□□□□□ -0.97
UBE3B-209ENST00000539584 ABCA12Q86UK0 2595 aa8.99□□□□□ -0.97
UBE3B-209ENST00000539584 TRBV7-6A0A0J9YX20 115 aa8.98□□□□□ -0.97
UBE3B-209ENST00000539584 CYSRT1A8MQ03 144 aa8.98□□□□□ -0.97
UBE3B-209ENST00000539584 LAMTOR3Q9UHA4 124 aa8.98□□□□□ -0.97
UBE3B-209ENST00000539584 ENHOQ6UWT2 76 aa8.98□□□□□ -0.97
UBE3B-209ENST00000539584 UNQ6190/PRO20217Q6UXQ8 127 aa8.98□□□□□ -0.97
UBE3B-209ENST00000539584 ITPR3Q14573 2671 aa8.98□□□□□ -0.97
UBE3B-209ENST00000539584 ZNF469Q96JG9 3925 aaPredicted RBP8.97□□□□□ -0.97
UBE3B-209ENST00000539584 SETXQ7Z333 2677 aaKnown RBP8.97□□□□□ -0.97
UBE3B-209ENST00000539584 SPART-AS1P0CW21 52 aa8.97□□□□□ -0.97
UBE3B-209ENST00000539584 Q8NDZ9 215 aa8.97□□□□□ -0.97
UBE3B-209ENST00000539584 DPH3Q96FX2 82 aa8.97□□□□□ -0.97
UBE3B-209ENST00000539584 KRTAP10-3P60369 221 aa8.97□□□□□ -0.97
UBE3B-209ENST00000539584 CXCL6P80162 114 aa8.97□□□□□ -0.97
UBE3B-209ENST00000539584 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.97□□□□□ -0.97
UBE3B-209ENST00000539584 DEFB135Q30KP9 77 aa8.96□□□□□ -0.98
UBE3B-209ENST00000539584 DIRC1Q969H9 104 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms