RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 SPINK8P0C7L1 97 aa3.16□□□□□ -1.9
LDHC-206ENST00000539369 ASIPP42127 132 aa3.16□□□□□ -1.9
LDHC-206ENST00000539369 CRIP1P50238 77 aa3.16□□□□□ -1.9
LDHC-206ENST00000539369 WFDC2Q14508 124 aa3.16□□□□□ -1.9
LDHC-206ENST00000539369 TEN1Q86WV5 123 aa3.16□□□□□ -1.9
LDHC-206ENST00000539369 DEFB104AQ8WTQ1 72 aa3.16□□□□□ -1.9
LDHC-206ENST00000539369 MRPL53Q96EL3 112 aaKnown RBP3.16□□□□□ -1.9
LDHC-206ENST00000539369 SLC50A1Q9BRV3 221 aa3.16□□□□□ -1.9
LDHC-206ENST00000539369 IGKV2D-26A0A0A0MRZ7 120 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 A0A0J9YY99 117 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 A8MWV9 139 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 H3BTX0 84 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 K7ERJ3 54 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 SOCS3O14543 225 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 KRTAP13-3Q3SY46 172 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 Q6Q795 121 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 AMTNQ6UX39 209 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 Q6ZUT4 128 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 RNF185Q96GF1 192 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 OPRPNQ99935 248 aaPredicted RBP3.15□□□□□ -1.91
LDHC-206ENST00000539369 C20orf78Q9BR46 151 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 ANAPC13Q9BS18 74 aa3.15□□□□□ -1.91
LDHC-206ENST00000539369 MRPL35Q9NZE8 188 aaKnown RBP3.15□□□□□ -1.91
LDHC-206ENST00000539369 A0A087X002 238 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 TMSB15BA0A087X1C1 80 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 A0A0J9YX75 114 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 A8MTW9 85 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 SMKR1H3BMG3 65 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 M0R381 172 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 SNCGO76070 127 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 OXTP01178 125 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 ORM1P02763 201 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 UBE2D1P51668 147 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 DSCR10P59022 87 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 KRTAP10-4P60372 401 aaPredicted RBP3.14□□□□□ -1.91
LDHC-206ENST00000539369 UBE2D3P61077 147 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 UBE2D2P62837 147 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 MRPL23Q16540 153 aaKnown RBP3.14□□□□□ -1.91
LDHC-206ENST00000539369 SPINK13Q1W4C9 94 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 SCGB1D4Q6XE38 83 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
LDHC-206ENST00000539369 SH2D6Q7Z4S9 175 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 SMIM2Q9BVW6 85 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 LENEPQ9Y5L5 61 aa3.14□□□□□ -1.91
LDHC-206ENST00000539369 TRAV12-2A0A075B6T6 113 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 IGKV2-40A0A087WW87 121 aaPredicted RBP3.13□□□□□ -1.91
LDHC-206ENST00000539369 ZNF815PA8K554 130 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 M0R3E3 92 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 NXPH4O95158 308 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 INSP01308 110 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 IGKV2D-40P01614 121 aaPredicted RBP3.13□□□□□ -1.91
LDHC-206ENST00000539369 RPL32P62910 135 aaKnown RBP3.13□□□□□ -1.91
LDHC-206ENST00000539369 SRSF9Q13242 221 aaKnown RBP eCLIP3.13□□□□□ -1.91
LDHC-206ENST00000539369 TMEM78Q5T7P6 136 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 SPANXN1Q5VSR9 72 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 LINC00612Q8N6U2 182 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 TOMM6Q96B49 74 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 LINC01600Q96MT4 127 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 SCGB3A1Q96QR1 104 aa3.13□□□□□ -1.91
LDHC-206ENST00000539369 NOP10Q9NPE3 64 aaKnown RBP3.13□□□□□ -1.91
LDHC-206ENST00000539369 PKHD1L1Q86WI1 4243 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 A0A096LPF7 62 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.12□□□□□ -1.91
LDHC-206ENST00000539369 A0A0B4J2C4 111 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 LOC107984156A0A0G2JMH3 177 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 H3BNG1 76 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 SCGB1C2P0DMR2 95 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 ID1P41134 155 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 PSMB2P49721 201 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 Q6ZSA8 131 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 ARL17AQ8IVW1 177 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 C10orf126Q8N4M7 172 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 VSIG2Q96IQ7 327 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 LINC01587Q99440 93 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 PRADC1Q9BSG0 188 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 DPH3P1Q9H4G8 78 aa3.12□□□□□ -1.91
LDHC-206ENST00000539369 TRBV7-9A0A0J9YWB2 115 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 FAM240AA0A1B0GVK7 77 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 LRCOL1A6NCL2 159 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 C11orf86A6NJI1 115 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 SLC25A20O43772 301 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 MT-ATP8P03928 68 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 MT1HL1P0DM35 61 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 IFITM1P13164 125 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 HTN1P15515 57 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 RPL13AP40429 203 aaKnown RBP3.11□□□□□ -1.91
LDHC-206ENST00000539369 ZNF80P51504 273 aaPredicted RBP3.11□□□□□ -1.91
LDHC-206ENST00000539369 ERCC8Q13216 396 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 ATXN8Q156A1 80 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 ANKRD29Q8N6D5 301 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 OR10J6PQ8NGY7 276 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 Q8TAT8 98 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 BAALCQ8WXS3 180 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 C16orf74Q96GX8 76 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 TMEM141Q96I45 108 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 TIMM17AQ99595 171 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 TTTY13Q9BZ97 58 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 TMEM126AQ9H061 195 aa3.11□□□□□ -1.91
LDHC-206ENST00000539369 TRAV8-2A0A0B4J237 113 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms