RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 HSD52Q0P140 79 aa11.4□□□□□ -0.58
CLN6-202ENST00000538696 COX11Q9Y6N1 276 aa11.4□□□□□ -0.58
CLN6-202ENST00000538696 PSCAO43653 123 aa11.39□□□□□ -0.59
CLN6-202ENST00000538696 MALP21145 153 aa11.39□□□□□ -0.59
CLN6-202ENST00000538696 ORAOV1Q8WV07 137 aa11.39□□□□□ -0.59
CLN6-202ENST00000538696 ZNF625Q96I27 306 aaPredicted RBP11.39□□□□□ -0.59
CLN6-202ENST00000538696 M0R143 59 aa11.38□□□□□ -0.59
CLN6-202ENST00000538696 BATFQ16520 125 aa11.38□□□□□ -0.59
CLN6-202ENST00000538696 FAT2Q9NYQ8 4349 aa11.38□□□□□ -0.59
CLN6-202ENST00000538696 TNP2Q05952 138 aa11.37□□□□□ -0.59
CLN6-202ENST00000538696 BVES-AS1Q5T3Y7 98 aa11.37□□□□□ -0.59
CLN6-202ENST00000538696 WFDC2Q14508 124 aa11.36□□□□□ -0.59
CLN6-202ENST00000538696 Q8IZM0 81 aa11.36□□□□□ -0.59
CLN6-202ENST00000538696 LRCOL1A6NCL2 159 aa11.35□□□□□ -0.59
CLN6-202ENST00000538696 KIAA0087Q14695 138 aa11.35□□□□□ -0.59
CLN6-202ENST00000538696 LITAFQ99732 161 aa11.35□□□□□ -0.59
CLN6-202ENST00000538696 SPANXB1Q9NS25 103 aaPredicted RBP11.35□□□□□ -0.59
CLN6-202ENST00000538696 APOMO95445 188 aa11.35□□□□□ -0.59
CLN6-202ENST00000538696 PRSS2P07478 247 aa11.35□□□□□ -0.59
CLN6-202ENST00000538696 TAL2Q16559 108 aa11.35□□□□□ -0.59
CLN6-202ENST00000538696 HIST1H4GQ99525 98 aa11.35□□□□□ -0.59
CLN6-202ENST00000538696 GCSHP23434 173 aa11.34□□□□□ -0.59
CLN6-202ENST00000538696 SPAG11BQ08648 103 aa11.34□□□□□ -0.59
CLN6-202ENST00000538696 C6orf226Q5I0X4 101 aa11.34□□□□□ -0.59
CLN6-202ENST00000538696 LINC00336Q6ZUF6 198 aa11.34□□□□□ -0.59
CLN6-202ENST00000538696 CEND1Q8N111 149 aa11.34□□□□□ -0.59
CLN6-202ENST00000538696 A0A087WTM6 91 aa11.33□□□□□ -0.6
CLN6-202ENST00000538696 TMEM238C9JI98 176 aa11.33□□□□□ -0.6
CLN6-202ENST00000538696 LECT2O14960 151 aa11.33□□□□□ -0.6
CLN6-202ENST00000538696 HERV-K104P63124 156 aa11.33□□□□□ -0.6
CLN6-202ENST00000538696 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
CLN6-202ENST00000538696 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
CLN6-202ENST00000538696 DNAH11Q96DT5 4516 aa11.32□□□□□ -0.6
CLN6-202ENST00000538696 TIMM17BO60830 172 aa11.32□□□□□ -0.6
CLN6-202ENST00000538696 FXYD2P54710 66 aa11.32□□□□□ -0.6
CLN6-202ENST00000538696 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLN6-202ENST00000538696 ADAMTSL4-AS1Q5T5F5 129 aa11.32□□□□□ -0.6
CLN6-202ENST00000538696 C15orf56Q8N910 161 aa11.32□□□□□ -0.6
CLN6-202ENST00000538696 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
CLN6-202ENST00000538696 USP17L23D6RBM5 183 aa11.31□□□□□ -0.6
CLN6-202ENST00000538696 MEIG1Q5JSS6 88 aa11.31□□□□□ -0.6
CLN6-202ENST00000538696 HIGD2BQ4VC39 106 aa11.3□□□□□ -0.6
CLN6-202ENST00000538696 SPANXDQ9BXN6 97 aa11.3□□□□□ -0.6
CLN6-202ENST00000538696 SPANXCQ9NY87 97 aa11.3□□□□□ -0.6
CLN6-202ENST00000538696 A0A0U1RRA0 63 aa11.29□□□□□ -0.6
CLN6-202ENST00000538696 SMIM13P0DJ93 91 aa11.29□□□□□ -0.6
CLN6-202ENST00000538696 CXCL5P42830 114 aa11.29□□□□□ -0.6
CLN6-202ENST00000538696 CKS1BP61024 79 aa11.29□□□□□ -0.6
CLN6-202ENST00000538696 SFTA2Q6UW10 78 aa11.29□□□□□ -0.6
CLN6-202ENST00000538696 DAND5Q8N907 189 aa11.28□□□□□ -0.6
CLN6-202ENST00000538696 CIRBPQ14011 172 aaKnown RBP11.27□□□□□ -0.61
CLN6-202ENST00000538696 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
CLN6-202ENST00000538696 Q8N814 137 aa11.27□□□□□ -0.61
CLN6-202ENST00000538696 A0A1B0GVY2 172 aa11.26□□□□□ -0.61
CLN6-202ENST00000538696 PTTG1IPP53801 180 aa11.26□□□□□ -0.61
CLN6-202ENST00000538696 MUSTN1Q8IVN3 82 aa11.26□□□□□ -0.61
CLN6-202ENST00000538696 NTN5Q8WTR8 489 aaPredicted RBP11.26□□□□□ -0.61
CLN6-202ENST00000538696 GVQW2A0A096LPI5 108 aaPredicted RBP11.25□□□□□ -0.61
CLN6-202ENST00000538696 NPC2P61916 151 aa11.25□□□□□ -0.61
CLN6-202ENST00000538696 COL5A1-AS1Q5SY13 56 aa11.25□□□□□ -0.61
CLN6-202ENST00000538696 UNQ6190/PRO20217Q6UXQ8 127 aa11.25□□□□□ -0.61
CLN6-202ENST00000538696 ERG28Q9UKR5 140 aa11.25□□□□□ -0.61
CLN6-202ENST00000538696 PKD1P98161 4303 aa11.24□□□□□ -0.61
CLN6-202ENST00000538696 C14orf177Q52M58 125 aa11.24□□□□□ -0.61
CLN6-202ENST00000538696 ZNF561-AS1K7EIQ3 104 aa11.23□□□□□ -0.61
CLN6-202ENST00000538696 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
CLN6-202ENST00000538696 PFN2P35080 140 aa11.23□□□□□ -0.61
CLN6-202ENST00000538696 LINC00158P58513 81 aa11.23□□□□□ -0.61
CLN6-202ENST00000538696 SOSTDC1Q6X4U4 206 aa11.23□□□□□ -0.61
CLN6-202ENST00000538696 Q6ZVH6 145 aa11.23□□□□□ -0.61
CLN6-202ENST00000538696 NHP2Q9NX24 153 aaKnown RBP11.23□□□□□ -0.61
CLN6-202ENST00000538696 DNAH5Q8TE73 4624 aa11.23□□□□□ -0.61
CLN6-202ENST00000538696 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.22□□□□□ -0.61
CLN6-202ENST00000538696 A6NDN8 102 aa11.22□□□□□ -0.61
CLN6-202ENST00000538696 K7ERJ3 54 aa11.22□□□□□ -0.61
CLN6-202ENST00000538696 KRTAP10-2P60368 255 aa11.22□□□□□ -0.61
CLN6-202ENST00000538696 LBHQ53QV2 105 aaPredicted RBP11.22□□□□□ -0.61
CLN6-202ENST00000538696 C9orf116Q5BN46 136 aaPredicted RBP11.22□□□□□ -0.61
CLN6-202ENST00000538696 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
CLN6-202ENST00000538696 LINC00308Q8TCZ7 52 aa11.22□□□□□ -0.61
CLN6-202ENST00000538696 C2orf48Q96LS8 159 aa11.22□□□□□ -0.61
CLN6-202ENST00000538696 IFITM1P13164 125 aa11.21□□□□□ -0.61
CLN6-202ENST00000538696 FUSP35637 526 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLN6-202ENST00000538696 CAMK2N2Q96S95 79 aa11.21□□□□□ -0.61
CLN6-202ENST00000538696 C6orf48Q9UBA6 75 aa11.21□□□□□ -0.61
CLN6-202ENST00000538696 A4D1N5 150 aa11.2□□□□□ -0.62
CLN6-202ENST00000538696 TMEM238LA0A1B0GVL6 79 aa11.19□□□□□ -0.62
CLN6-202ENST00000538696 A6NJY4 79 aa11.19□□□□□ -0.62
CLN6-202ENST00000538696 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
CLN6-202ENST00000538696 RPL24P83731 157 aaKnown RBP11.19□□□□□ -0.62
CLN6-202ENST00000538696 Q6ZRU5 148 aa11.19□□□□□ -0.62
CLN6-202ENST00000538696 A0A1B0GWB2 263 aa11.18□□□□□ -0.62
CLN6-202ENST00000538696 SLPIP03973 132 aa11.18□□□□□ -0.62
CLN6-202ENST00000538696 DYNC1H1Q14204 4646 aaKnown RBP11.17□□□□□ -0.62
CLN6-202ENST00000538696 HECTD4Q9Y4D8 3996 aa11.17□□□□□ -0.62
CLN6-202ENST00000538696 IGLV5-52A0A0A0MRZ9 124 aa11.16□□□□□ -0.62
CLN6-202ENST00000538696 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
CLN6-202ENST00000538696 F8WDY8 70 aa11.16□□□□□ -0.62
CLN6-202ENST00000538696 CNBPP62633 177 aaKnown RBP11.16□□□□□ -0.62
CLN6-202ENST00000538696 RAB37Q96AX2 223 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms