RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 LINC01600Q96MT4 127 aa0.68□□□□□ -2.3
MDM1-208ENST00000538454 ST20Q9HBF5 79 aa0.68□□□□□ -2.3
MDM1-208ENST00000538454 CRYBG1Q9Y4K1 1723 aa0.68□□□□□ -2.3
MDM1-208ENST00000538454 SHPRHQ149N8 1683 aa0.68□□□□□ -2.3
MDM1-208ENST00000538454 MAP3K1Q13233 1512 aa0.68□□□□□ -2.3
MDM1-208ENST00000538454 PAPPA2Q9BXP8 1791 aa0.68□□□□□ -2.3
MDM1-208ENST00000538454 TMEM131LA2VDJ0 1609 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 LRP6O75581 1613 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 C1orf167Q5SNV9 1468 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 RRBP1Q9P2E9 1410 aaKnown RBP0.67□□□□□ -2.3
MDM1-208ENST00000538454 LEPROTL1O95214 131 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 ADIRFQ15847 76 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 DEFB107AQ8IZN7 70 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 CACNA1EQ15878 2313 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 PLCE1Q9P212 2302 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 POLQO75417 2590 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 LAMC1P11047 1609 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 TARBP1Q13395 1621 aaKnown RBP0.67□□□□□ -2.3
MDM1-208ENST00000538454 NHSL1Q5SYE7 1610 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 F8P00451 2351 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 LRRIQ1Q96JM4 1722 aa0.67□□□□□ -2.3
MDM1-208ENST00000538454 DNAJC13O75165 2243 aa0.66□□□□□ -2.3
MDM1-208ENST00000538454 TTC28Q96AY4 2481 aa0.66□□□□□ -2.3
MDM1-208ENST00000538454 C5P01031 1676 aa0.66□□□□□ -2.3
MDM1-208ENST00000538454 CUX1P39880 1505 aa0.66□□□□□ -2.3
MDM1-208ENST00000538454 KANTRA0A1W2PQU2 76 aa0.66□□□□□ -2.3
MDM1-208ENST00000538454 IQCF6A8MYZ5 107 aa0.66□□□□□ -2.3
MDM1-208ENST00000538454 D6R8Y8 96 aa0.66□□□□□ -2.3
MDM1-208ENST00000538454 LINC00643Q86TS7 51 aa0.66□□□□□ -2.3
MDM1-208ENST00000538454 MUSTN1Q8IVN3 82 aa0.66□□□□□ -2.3
MDM1-208ENST00000538454 XRN1Q8IZH2 1706 aaKnown RBP0.66□□□□□ -2.3
MDM1-208ENST00000538454 ABCA12Q86UK0 2595 aa0.65□□□□□ -2.3
MDM1-208ENST00000538454 TNCP24821 2201 aa0.65□□□□□ -2.3
MDM1-208ENST00000538454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.65□□□□□ -2.31
MDM1-208ENST00000538454 TRBV6-1A0A0K0K1D8 114 aa0.65□□□□□ -2.31
MDM1-208ENST00000538454 MYMXA0A1B0GTQ4 84 aa0.65□□□□□ -2.31
MDM1-208ENST00000538454 H0Y9P7 68 aa0.65□□□□□ -2.31
MDM1-208ENST00000538454 ACYP1P07311 99 aa0.65□□□□□ -2.31
MDM1-208ENST00000538454 CNFNQ9BYD5 112 aa0.65□□□□□ -2.31
MDM1-208ENST00000538454 CELSR2Q9HCU4 2923 aa0.65□□□□□ -2.31
MDM1-208ENST00000538454 ANKRD36A6QL64 1941 aa0.65□□□□□ -2.31
MDM1-208ENST00000538454 ERCC6L2Q5T890 1561 aa0.65□□□□□ -2.31
MDM1-208ENST00000538454 CHD9Q3L8U1 2897 aa0.65□□□□□ -2.31
MDM1-208ENST00000538454 ALKQ9UM73 1620 aa0.64□□□□□ -2.31
MDM1-208ENST00000538454 KIF20BQ96Q89 1820 aa0.64□□□□□ -2.31
MDM1-208ENST00000538454 GOLGA4Q13439 2230 aaKnown RBP0.64□□□□□ -2.31
MDM1-208ENST00000538454 BVES-AS1Q5T3Y7 98 aa0.64□□□□□ -2.31
MDM1-208ENST00000538454 UBE2D4Q9Y2X8 147 aa0.64□□□□□ -2.31
MDM1-208ENST00000538454 FRAS1Q86XX4 4008 aa0.64□□□□□ -2.31
MDM1-208ENST00000538454 CFAP74Q9C0B2 1584 aa0.63□□□□□ -2.31
MDM1-208ENST00000538454 H3BUT2 72 aa0.63□□□□□ -2.31
MDM1-208ENST00000538454 IGLC2P0DOY2 106 aa0.63□□□□□ -2.31
MDM1-208ENST00000538454 IGLC3P0DOY3 106 aa0.63□□□□□ -2.31
MDM1-208ENST00000538454 GNGT1P63211 74 aa0.63□□□□□ -2.31
MDM1-208ENST00000538454 PLGLAQ15195 96 aa0.63□□□□□ -2.31
MDM1-208ENST00000538454 C6orf201Q7Z4U5 140 aa0.63□□□□□ -2.31
MDM1-208ENST00000538454 PKD1L3Q7Z443 1732 aa0.63□□□□□ -2.31
MDM1-208ENST00000538454 LTN1O94822 1766 aa0.62□□□□□ -2.31
MDM1-208ENST00000538454 PPRC1Q5VV67 1664 aaKnown RBP0.62□□□□□ -2.31
MDM1-208ENST00000538454 ZFHX3Q15911 3703 aa0.62□□□□□ -2.31
MDM1-208ENST00000538454 LRRC9Q6ZRR7 1453 aa0.62□□□□□ -2.31
MDM1-208ENST00000538454 A0A0G2JMZ2 1700 aa0.62□□□□□ -2.31
MDM1-208ENST00000538454 SPINK6Q6UWN8 80 aa0.62□□□□□ -2.31
MDM1-208ENST00000538454 PTPN23Q9H3S7 1636 aa0.62□□□□□ -2.31
MDM1-208ENST00000538454 RGPD8O14715 1765 aaPredicted RBP0.62□□□□□ -2.31
MDM1-208ENST00000538454 RGPD5Q99666 1765 aa0.62□□□□□ -2.31
MDM1-208ENST00000538454 ZNF292O60281 2723 aa0.62□□□□□ -2.31
MDM1-208ENST00000538454 ABCA8O94911 1581 aa0.62□□□□□ -2.31
MDM1-208ENST00000538454 SAMD9Q5K651 1589 aa0.62□□□□□ -2.31
MDM1-208ENST00000538454 CCDC88BA6NC98 1476 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 ATP7BP35670 1465 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 TPRP12270 2363 aaKnown RBP0.61□□□□□ -2.31
MDM1-208ENST00000538454 C2CD3Q4AC94 2353 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 RGPD2P0DJD1 1756 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 TULP4Q9NRJ4 1543 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 A0A1B0GU69 56 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 LINC00959A0A1B0GUT2 108 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 CEBPZOSA8MTT3 80 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 PRH1P02810 166 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 ANKARQ7Z5J8 1434 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 DNMBPQ6XZF7 1577 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 SPTBN2O15020 2390 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 RGPD1P0DJD0 1748 aa0.61□□□□□ -2.31
MDM1-208ENST00000538454 SLIT1O75093 1534 aa0.6□□□□□ -2.31
MDM1-208ENST00000538454 ABCC1P33527 1531 aa0.6□□□□□ -2.31
MDM1-208ENST00000538454 I3L2K1 104 aa0.6□□□□□ -2.31
MDM1-208ENST00000538454 C18orf32Q8TCD1 76 aa0.6□□□□□ -2.31
MDM1-208ENST00000538454 DOPEY2Q9Y3R5 2298 aa0.6□□□□□ -2.31
MDM1-208ENST00000538454 ANKRD17O75179 2603 aaKnown RBP0.6□□□□□ -2.31
MDM1-208ENST00000538454 USP24Q9UPU5 2620 aa0.6□□□□□ -2.31
MDM1-208ENST00000538454 NCOA2Q15596 1464 aa0.6□□□□□ -2.31
MDM1-208ENST00000538454 KIAA0556O60303 1618 aa0.6□□□□□ -2.31
MDM1-208ENST00000538454 PAPPAQ13219 1627 aa0.6□□□□□ -2.31
MDM1-208ENST00000538454 MYO5CQ9NQX4 1742 aa0.59□□□□□ -2.31
MDM1-208ENST00000538454 TRBV7-4A0A0J9YYF1 115 aa0.59□□□□□ -2.31
MDM1-208ENST00000538454 DEFB121Q5J5C9 76 aa0.59□□□□□ -2.31
MDM1-208ENST00000538454 SMR3AQ99954 134 aa0.59□□□□□ -2.31
MDM1-208ENST00000538454 TP53AIP1Q9HCN2 124 aa0.59□□□□□ -2.31
MDM1-208ENST00000538454 PRO0255Q9UI72 69 aa0.59□□□□□ -2.31
MDM1-208ENST00000538454 IQGAP3Q86VI3 1631 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms